RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 OR2D3Q8NGH3 330 aa11.37□□□□□ -0.59
CCDC57-203ENST00000392343 FER1L6-AS2Q96M78 137 aa11.37□□□□□ -0.59
CCDC57-203ENST00000392343 VWC2LB2RUY7 222 aa11.37□□□□□ -0.59
CCDC57-203ENST00000392343 PRB4P10163 310 aaPredicted RBP11.37□□□□□ -0.59
CCDC57-203ENST00000392343 PRCDQ00LT1 54 aa11.37□□□□□ -0.59
CCDC57-203ENST00000392343 KLHDC1Q8N7A1 406 aa11.37□□□□□ -0.59
CCDC57-203ENST00000392343 MCRIP2Q9BUT9 160 aaKnown RBP11.37□□□□□ -0.59
CCDC57-203ENST00000392343 ASCL3Q9NQ33 180 aa11.37□□□□□ -0.59
CCDC57-203ENST00000392343 DSCAML1Q8TD84 2053 aa11.37□□□□□ -0.59
CCDC57-203ENST00000392343 ADGRG4Q8IZF6 3080 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 TACC2O95359 2948 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 KBTBD11-OT1A0A1B0GTJ5 212 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 CT45A6P0DMU7 189 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 CT45A5P0DMU8 189 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 CT45A7P0DMV0 189 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 CCL11P51671 97 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 C19orf35Q6ZS72 473 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 FAM167A-AS1Q96KT0 104 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 CCL13Q99616 98 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 TNFRSF19Q9NS68 423 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 MGAQ8IWI9 3026 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 A0A1W2PRE2 83 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 HIGD1CA8MV81 97 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 H3BTX0 84 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 UPK2O00526 184 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 SAA1P0DJI8 122 aaPredicted RBP11.36□□□□□ -0.59
CCDC57-203ENST00000392343 CGB3P0DN86 165 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 CGB7P0DN87 165 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 TCF24Q7RTU0 167 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 C1orf210Q8IVY1 113 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 FAM216BQ8N7L0 139 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 BLNKQ8WV28 456 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 PRNDQ9UKY0 176 aa11.36□□□□□ -0.59
CCDC57-203ENST00000392343 TIMM8BQ9Y5J9 83 aaPredicted RBP11.36□□□□□ -0.59
CCDC57-203ENST00000392343 LNP1A1A4G5 178 aa11.35□□□□□ -0.59
CCDC57-203ENST00000392343 M0R1B8 84 aa11.35□□□□□ -0.59
CCDC57-203ENST00000392343 RNASE2P10153 161 aaKnown RBP11.35□□□□□ -0.59
CCDC57-203ENST00000392343 C10orf55Q5SWW7 151 aa11.35□□□□□ -0.59
CCDC57-203ENST00000392343 TMEM178AQ8NBL3 297 aa11.35□□□□□ -0.59
CCDC57-203ENST00000392343 OR8B2Q96RD0 313 aa11.35□□□□□ -0.59
CCDC57-203ENST00000392343 TBR1Q16650 682 aa11.35□□□□□ -0.59
CCDC57-203ENST00000392343 CR1LQ2VPA4 569 aa11.35□□□□□ -0.59
CCDC57-203ENST00000392343 MBNL2Q5VZF2 373 aaKnown RBP11.35□□□□□ -0.59
CCDC57-203ENST00000392343 ZNF841Q6ZN19 808 aa11.35□□□□□ -0.59
CCDC57-203ENST00000392343 LINC00173Q6ZV60 143 aa11.35□□□□□ -0.59
CCDC57-203ENST00000392343 BET1LQ9NYM9 111 aa11.35□□□□□ -0.59
CCDC57-203ENST00000392343 CSMD1Q96PZ7 3565 aa11.35□□□□□ -0.59
CCDC57-203ENST00000392343 H0Y8G0 127 aa11.34□□□□□ -0.59
CCDC57-203ENST00000392343 CD69Q07108 199 aa11.34□□□□□ -0.59
CCDC57-203ENST00000392343 COX19Q49B96 90 aa11.34□□□□□ -0.59
CCDC57-203ENST00000392343 NPIPB3Q92617 1050 aa11.34□□□□□ -0.59
CCDC57-203ENST00000392343 ALKBH7Q9BT30 221 aaPredicted RBP11.34□□□□□ -0.59
CCDC57-203ENST00000392343 PAXXQ9BUH6 204 aa11.34□□□□□ -0.59
CCDC57-203ENST00000392343 COX11Q9Y6N1 276 aa11.34□□□□□ -0.59
CCDC57-203ENST00000392343 TRAV9-2A0A087WT02 112 aa11.34□□□□□ -0.59
CCDC57-203ENST00000392343 COX7A2P2O60397 106 aa11.34□□□□□ -0.59
CCDC57-203ENST00000392343 REG1AP05451 166 aa11.34□□□□□ -0.59
CCDC57-203ENST00000392343 UBE2G1P62253 170 aa11.34□□□□□ -0.59
CCDC57-203ENST00000392343 LEMD1Q68G75 181 aa11.34□□□□□ -0.59
CCDC57-203ENST00000392343 CACNA1GO43497 2377 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 C2orf70A6NJV1 201 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 PEX7O00628 323 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 APELAP0DMC3 54 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 ZNF137PP52743 207 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 PATE2Q6UY27 113 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 ZNF329Q86UD4 541 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 UBALD2Q8IYN6 164 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 ORAOV1Q8WV07 137 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 PRO3102Q9H379 93 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 MRPL36Q9P0J6 103 aaKnown RBP11.33□□□□□ -0.6
CCDC57-203ENST00000392343 ARL2-SNX15V9GYD0 113 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 hDV102S1A0JD36 115 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 CEACAM8P31997 349 aaPredicted RBP11.33□□□□□ -0.6
CCDC57-203ENST00000392343 RNF151Q2KHN1 245 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 ZNF738Q8NE65 137 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 MBD6Q96DN6 1003 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 URB1-AS1Q96HZ7 61 aa11.33□□□□□ -0.6
CCDC57-203ENST00000392343 FNDC4Q9H6D8 234 aaPredicted RBP11.33□□□□□ -0.6
CCDC57-203ENST00000392343 RAI1Q7Z5J4 1906 aaPredicted RBP11.32□□□□□ -0.6
CCDC57-203ENST00000392343 IGHV3-21A0A0B4J1V1 117 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 IGHV2-26A0A0B4J1V2 119 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 NKX2-8O15522 239 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 IGLV1-44P01699 117 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 ZNF138P52744 262 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 UBE2V1Q13404 147 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 C2orf83Q53S99 150 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 RUSC1-AS1Q66K80 236 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 LINC00322Q6ZN03 302 aaPredicted RBP11.32□□□□□ -0.6
CCDC57-203ENST00000392343 OR4F17Q8NGA8 305 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 OR5B3Q8NH48 314 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 COMMD5Q9GZQ3 224 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 MRPL27Q9P0M9 148 aaKnown RBP11.32□□□□□ -0.6
CCDC57-203ENST00000392343 RNF24Q9Y225 148 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 PSMB11A5LHX3 300 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 NKX6-3A6NJ46 265 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 ORM2P19652 201 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 RBX1P62877 108 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 GUSBP1Q15486 140 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 RTL8BQ17RB0 113 aa11.32□□□□□ -0.6
CCDC57-203ENST00000392343 C10orf113Q5VZT2 155 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms