RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 LLPHQ9BRT6 129 aaKnown RBP0.35□□□□□ -2.35
RNU6-550P-201ENST00000391057 ERGIC3Q9Y282 383 aa0.35□□□□□ -2.35
RNU6-550P-201ENST00000391057 EML6Q6ZMW3 1958 aa0.35□□□□□ -2.35
RNU6-550P-201ENST00000391057 KIF13BQ9NQT8 1826 aa0.34□□□□□ -2.35
RNU6-550P-201ENST00000391057 EML5Q05BV3 1969 aa0.34□□□□□ -2.35
RNU6-550P-201ENST00000391057 CETN3O15182 167 aa0.34□□□□□ -2.36
RNU6-550P-201ENST00000391057 CD79AP11912 226 aa0.34□□□□□ -2.36
RNU6-550P-201ENST00000391057 ZNF25P17030 456 aaPredicted RBP0.34□□□□□ -2.36
RNU6-550P-201ENST00000391057 HIST1H1TP22492 207 aaPredicted RBP0.34□□□□□ -2.36
RNU6-550P-201ENST00000391057 SPCS3P61009 180 aa0.34□□□□□ -2.36
RNU6-550P-201ENST00000391057 MPV17LQ2QL34 196 aa0.34□□□□□ -2.36
RNU6-550P-201ENST00000391057 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.36
RNU6-550P-201ENST00000391057 TEX261Q6UWH6 196 aa0.34□□□□□ -2.36
RNU6-550P-201ENST00000391057 TMEM86BQ8N661 226 aa0.34□□□□□ -2.36
RNU6-550P-201ENST00000391057 C4orf3Q8WVX3 66 aa0.34□□□□□ -2.36
RNU6-550P-201ENST00000391057 PPP1R2P1Q96PQ5 205 aa0.34□□□□□ -2.36
RNU6-550P-201ENST00000391057 CDC42SE1Q9NRR8 79 aa0.34□□□□□ -2.36
RNU6-550P-201ENST00000391057 TMEM56-RWDD3S4R434 201 aa0.34□□□□□ -2.36
RNU6-550P-201ENST00000391057 U3KQ87 197 aa0.34□□□□□ -2.36
RNU6-550P-201ENST00000391057 ADGRB2O60241 1585 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 TGIF2-C20orf24A0A0A6YYL0 155 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 EXOC1LA0A1B0GW35 172 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 CCDC160A6NGH7 325 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 BUB1B-PAK6H3BSN5 160 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 FAAHO00519 579 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 NCR3O14931 201 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 LYZL6O75951 148 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 CDC42P60953 191 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 C1orf137Q5JT78 98 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 CCDC122Q5T0U0 273 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 SPOPLQ6IQ16 392 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 C8orf74Q6P047 294 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 SOSTDC1Q6X4U4 206 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 TRAPPC6BQ86SZ2 158 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 OR13D1Q8NGV5 346 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 OSTCQ9NRP0 149 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 NHP2Q9NX24 153 aaKnown RBP0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 HS3ST2Q9Y278 367 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 PKIGQ9Y2B9 76 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 SLC35A3Q9Y2D2 325 aa0.33□□□□□ -2.36
RNU6-550P-201ENST00000391057 A0A1W2PPM0 123 aa0.32□□□□□ -2.36
RNU6-550P-201ENST00000391057 ZNF736B4DX44 427 aaPredicted RBP0.32□□□□□ -2.36
RNU6-550P-201ENST00000391057 CRYZL1O95825 349 aa0.32□□□□□ -2.36
RNU6-550P-201ENST00000391057 HIST1H1EP10412 219 aaKnown RBP0.32□□□□□ -2.36
RNU6-550P-201ENST00000391057 S100A4P26447 101 aaKnown RBP0.32□□□□□ -2.36
RNU6-550P-201ENST00000391057 RPL5P46777 297 aaKnown RBP0.32□□□□□ -2.36
RNU6-550P-201ENST00000391057 MAGOHP61326 146 aaKnown RBP0.32□□□□□ -2.36
RNU6-550P-201ENST00000391057 OR2F1Q13607 317 aa0.32□□□□□ -2.36
RNU6-550P-201ENST00000391057 SPATA8Q6RVD6 105 aa0.32□□□□□ -2.36
RNU6-550P-201ENST00000391057 C3orf56Q8N813 242 aa0.32□□□□□ -2.36
RNU6-550P-201ENST00000391057 OR10J5Q8NHC4 309 aa0.32□□□□□ -2.36
RNU6-550P-201ENST00000391057 PATE1Q8WXA2 126 aa0.32□□□□□ -2.36
RNU6-550P-201ENST00000391057 GPR146Q96CH1 333 aa0.32□□□□□ -2.36
RNU6-550P-201ENST00000391057 TMEM70Q9BUB7 260 aa0.32□□□□□ -2.36
RNU6-550P-201ENST00000391057 TRAV3A0A0B4J244 114 aa0.31□□□□□ -2.36
RNU6-550P-201ENST00000391057 SULT1A1P50225 295 aa0.31□□□□□ -2.36
RNU6-550P-201ENST00000391057 RPS20P60866 119 aaKnown RBP0.31□□□□□ -2.36
RNU6-550P-201ENST00000391057 DEFB113Q30KQ7 82 aa0.31□□□□□ -2.36
RNU6-550P-201ENST00000391057 ACOT6Q3I5F7 207 aaPredicted RBP0.31□□□□□ -2.36
RNU6-550P-201ENST00000391057 CDKL4Q5MAI5 379 aa0.31□□□□□ -2.36
RNU6-550P-201ENST00000391057 OR52R1Q8NGF1 315 aa0.31□□□□□ -2.36
RNU6-550P-201ENST00000391057 DCUN1D1Q96GG9 259 aa0.31□□□□□ -2.36
RNU6-550P-201ENST00000391057 TSPAN32Q96QS1 320 aa0.31□□□□□ -2.36
RNU6-550P-201ENST00000391057 C20orf27Q9GZN8 174 aa0.31□□□□□ -2.36
RNU6-550P-201ENST00000391057 GUCA1BQ9UMX6 200 aa0.31□□□□□ -2.36
RNU6-550P-201ENST00000391057 TNRC6AQ8NDV7 1962 aaKnown RBP0.31□□□□□ -2.36
RNU6-550P-201ENST00000391057 NUP155O75694 1391 aa0.31□□□□□ -2.36
RNU6-550P-201ENST00000391057 MTUS2Q5JR59 1369 aa0.31□□□□□ -2.36
RNU6-550P-201ENST00000391057 MAP3K5Q99683 1374 aa0.31□□□□□ -2.36
RNU6-550P-201ENST00000391057 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 OR4C46A6NHA9 309 aa0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 PHGR1C9JFL3 82 aa0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 IFNA5P01569 189 aa0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 SMIM10L2AP0DMW4 78 aa0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 SMIM10L2BP0DMW5 78 aa0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 DEFA1P59665 94 aa0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 YPEL3P61236 119 aaPredicted RBP0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 COTL1Q14019 142 aa0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 GKN2Q86XP6 184 aa0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 CLECL1Q8IZS7 167 aa0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 C6orf62Q9GZU0 229 aaPredicted RBP0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 DCSTAMPQ9H295 470 aa0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 OR51V1Q9H2C8 321 aa0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 MRPL27Q9P0M9 148 aaKnown RBP0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 EPDR1Q9UM22 224 aa0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 V9GYY5 206 aaPredicted RBP0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 CEP192Q8TEP8 1941 aa0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 WRNQ14191 1432 aaPredicted RBP eCLIP0.3□□□□□ -2.36
RNU6-550P-201ENST00000391057 TRAV26-2A0A0B4J265 109 aa0.29□□□□□ -2.36
RNU6-550P-201ENST00000391057 C7orf71A4D174 169 aa0.29□□□□□ -2.36
RNU6-550P-201ENST00000391057 PIRO00625 290 aa0.29□□□□□ -2.36
RNU6-550P-201ENST00000391057 OR2J2O76002 312 aa0.29□□□□□ -2.36
RNU6-550P-201ENST00000391057 DNAL4O96015 105 aa0.29□□□□□ -2.36
RNU6-550P-201ENST00000391057 OR4E1P0C645 316 aa0.29□□□□□ -2.36
RNU6-550P-201ENST00000391057 LINC01554Q52M75 96 aa0.29□□□□□ -2.36
RNU6-550P-201ENST00000391057 BRMS1LQ5PSV4 323 aa0.29□□□□□ -2.36
RNU6-550P-201ENST00000391057 KRT222Q8N1A0 295 aa0.29□□□□□ -2.36
RNU6-550P-201ENST00000391057 TEX47Q8TBZ9 253 aa0.29□□□□□ -2.36
RNU6-550P-201ENST00000391057 ITFG2Q969R8 447 aa0.29□□□□□ -2.36
RNU6-550P-201ENST00000391057 CCDC90BQ9GZT6 254 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms