RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 SEPSECSQ9HD40 501 aaKnown RBP13.33□□□□□ -0.28
PTPRN2-201ENST00000389413 ZNF318Q5VUA4 2279 aa13.33□□□□□ -0.28
PTPRN2-201ENST00000389413 A0A1B0GUT8 65 aa13.33□□□□□ -0.28
PTPRN2-201ENST00000389413 TEX45Q8NA69 505 aa13.33□□□□□ -0.28
PTPRN2-201ENST00000389413 SLC25A15Q9Y619 301 aa13.33□□□□□ -0.28
PTPRN2-201ENST00000389413 FOXI3A8MTJ6 420 aaPredicted RBP13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 RNF224P0DH78 156 aa13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 SPATA31B1PQ5VZV4 182 aa13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 ANOS1P23352 680 aa13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 LINC00205P59089 165 aa13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 SPTBN1Q01082 2364 aaKnown RBP13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 TMPRSS3P57727 454 aa13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 LOXL3P58215 753 aa13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 HERVK_113P61574 105 aa13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 C2orf83Q53S99 150 aa13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 RBPMS2Q6ZRY4 209 aaKnown RBP13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 OR10W1Q8NGF6 305 aa13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 C14orf144Q96I85 54 aa13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 EPDR1Q9UM22 224 aa13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 CACNA1GO43497 2377 aa13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 C9JCJ5 164 aa13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 GFRA3O60609 400 aa13.32□□□□□ -0.28
PTPRN2-201ENST00000389413 CGB1A6NKQ9 187 aa13.31□□□□□ -0.28
PTPRN2-201ENST00000389413 K7ERU9 68 aa13.31□□□□□ -0.28
PTPRN2-201ENST00000389413 GNG5P63218 68 aa13.31□□□□□ -0.28
PTPRN2-201ENST00000389413 COTL1Q14019 142 aa13.31□□□□□ -0.28
PTPRN2-201ENST00000389413 LYRM7Q5U5X0 104 aa13.31□□□□□ -0.28
PTPRN2-201ENST00000389413 TMEM133Q9H2Q1 129 aa13.31□□□□□ -0.28
PTPRN2-201ENST00000389413 PRDM13Q9H4Q3 707 aa13.31□□□□□ -0.28
PTPRN2-201ENST00000389413 OR4C46A6NHA9 309 aa13.31□□□□□ -0.28
PTPRN2-201ENST00000389413 TMEM136Q6ZRR5 245 aa13.31□□□□□ -0.28
PTPRN2-201ENST00000389413 IGHG3P01860 377 aa13.3□□□□□ -0.28
PTPRN2-201ENST00000389413 ACTL10Q5JWF8 245 aa13.3□□□□□ -0.28
PTPRN2-201ENST00000389413 RNF138Q8WVD3 245 aa13.3□□□□□ -0.28
PTPRN2-201ENST00000389413 IGKV3-15P01624 115 aa13.3□□□□□ -0.28
PTPRN2-201ENST00000389413 UQCRFS1P47985 274 aa13.3□□□□□ -0.28
PTPRN2-201ENST00000389413 OR10J6PQ8NGY7 276 aa13.3□□□□□ -0.28
PTPRN2-201ENST00000389413 IGKV1D-17A0A075B6S4 117 aa13.3□□□□□ -0.28
PTPRN2-201ENST00000389413 IGHV3-35A0A0C4DH35 117 aa13.3□□□□□ -0.28
PTPRN2-201ENST00000389413 ZNF324O75467 553 aaPredicted RBP13.3□□□□□ -0.28
PTPRN2-201ENST00000389413 RNFT1Q5M7Z0 435 aa13.3□□□□□ -0.28
PTPRN2-201ENST00000389413 POLEQ07864 2286 aa13.3□□□□□ -0.28
PTPRN2-201ENST00000389413 GAGE10A6NGK3 116 aa13.3□□□□□ -0.28
PTPRN2-201ENST00000389413 OR10J3Q5JRS4 329 aa13.3□□□□□ -0.28
PTPRN2-201ENST00000389413 PPP1R27Q86WC6 154 aa13.3□□□□□ -0.28
PTPRN2-201ENST00000389413 OTORQ9NRC9 128 aa13.3□□□□□ -0.28
PTPRN2-201ENST00000389413 IGKV1D-33P01593 117 aa13.29□□□□□ -0.28
PTPRN2-201ENST00000389413 IGKV1-33P01594 117 aa13.29□□□□□ -0.28
PTPRN2-201ENST00000389413 CX3CL1P78423 397 aa13.29□□□□□ -0.28
PTPRN2-201ENST00000389413 ZNF841Q6ZN19 808 aa13.29□□□□□ -0.28
PTPRN2-201ENST00000389413 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.29□□□□□ -0.28
PTPRN2-201ENST00000389413 LMO1P25800 156 aa13.29□□□□□ -0.28
PTPRN2-201ENST00000389413 SRSF9Q13242 221 aaKnown RBP eCLIP13.29□□□□□ -0.281e-6■■■■□ 23.3
PTPRN2-201ENST00000389413 S4R3C0 116 aa13.29□□□□□ -0.28
PTPRN2-201ENST00000389413 ID1P41134 155 aa13.29□□□□□ -0.28
PTPRN2-201ENST00000389413 A0A1W2PS18 150 aa13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 AREGP15514 252 aa13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 C21orf62Q9NYP8 219 aa13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 SHANK1Q9Y566 2161 aa13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 DIDO1Q9BTC0 2240 aaKnown RBP13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 TRAV5A0A0B4J249 113 aa13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 SFTPCP11686 197 aa13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 Q6AWC8 147 aa13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 SSC4DQ8WTU2 575 aa13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 PMCHL2Q9BQD1 86 aa13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 SSBP4Q9BWG4 385 aaPredicted RBP13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 A0A1B0GW15 77 aa13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 IGKV1-39P01597 117 aa13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 IGKV1D-39P04432 117 aa13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 CIARTQ8N365 385 aaPredicted RBP13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 LY96Q9Y6Y9 160 aa13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 FOXH1O75593 365 aa13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 APOHP02749 345 aaPredicted RBP13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 WFDC3Q8IUB2 231 aa13.28□□□□□ -0.28
PTPRN2-201ENST00000389413 ZNF503-AS2A6NEH8 195 aa13.27□□□□□ -0.29
PTPRN2-201ENST00000389413 C10orf55Q5SWW7 151 aa13.27□□□□□ -0.29
PTPRN2-201ENST00000389413 CA1P00915 261 aaPredicted RBP13.27□□□□□ -0.29
PTPRN2-201ENST00000389413 NPPCP23582 126 aa13.27□□□□□ -0.29
PTPRN2-201ENST00000389413 LEMD1Q68G75 181 aa13.27□□□□□ -0.29
PTPRN2-201ENST00000389413 LYPD6BQ8NI32 183 aa13.27□□□□□ -0.29
PTPRN2-201ENST00000389413 PRELID3AQ96N28 172 aa13.27□□□□□ -0.29
PTPRN2-201ENST00000389413 PKDREJQ9NTG1 2253 aa13.27□□□□□ -0.29
PTPRN2-201ENST00000389413 TMEM256Q8N2U0 113 aa13.27□□□□□ -0.29
PTPRN2-201ENST00000389413 RNASE6Q93091 150 aaKnown RBP13.27□□□□□ -0.29
PTPRN2-201ENST00000389413 AKAP6Q13023 2319 aa13.26□□□□□ -0.29
PTPRN2-201ENST00000389413 CEP350Q5VT06 3117 aa13.26□□□□□ -0.29
PTPRN2-201ENST00000389413 PF4V1P10720 104 aa13.26□□□□□ -0.29
PTPRN2-201ENST00000389413 TSKUQ8WUA8 353 aa13.26□□□□□ -0.29
PTPRN2-201ENST00000389413 DPF1Q92782 380 aa13.26□□□□□ -0.29
PTPRN2-201ENST00000389413 DLX6P56179 175 aa13.26□□□□□ -0.29
PTPRN2-201ENST00000389413 ERVK11-1P61568 191 aa13.26□□□□□ -0.29
PTPRN2-201ENST00000389413 CRIM1Q9NZV1 1036 aa13.26□□□□□ -0.29
PTPRN2-201ENST00000389413 LOC102724200A0A096LPH7 203 aaPredicted RBP13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 MBD3L4A6NDZ8 208 aaPredicted RBP13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 MBD3L3A6NE82 208 aaPredicted RBP13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 MBD3L5A6NJ08 208 aaPredicted RBP13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 PFN1P07737 140 aaKnown RBP13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 Q8NFD4 153 aa13.25□□□□□ -0.29
PTPRN2-201ENST00000389413 MBD3L2Q8NHZ7 208 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms