RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 KBTBD11-OT1A0A1B0GTJ5 212 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 J3KRW8 73 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 YPEL1O60688 119 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 IL18BPO95998 194 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 SAA1P0DJI8 122 aaPredicted RBP10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 SAPCD1Q5SSQ6 148 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 AMMECR1LQ6DCA0 310 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 TMEM136Q6ZRR5 245 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 COLCA1Q6ZS62 124 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 OR52E5Q8NH55 327 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 TIMD4Q96H15 378 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 COQ2Q96H96 371 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 YPEL2Q96QA6 119 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 MCRIP2Q9BUT9 160 aaKnown RBP10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 PCNX1Q96RV3 2341 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 PRR33A8MZF0 331 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 M0QZ24 198 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 NUPR1O60356 82 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 Q0VFX4 171 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 NUDT10Q8NFP7 164 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 NUDT11Q96G61 164 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 C18orf15Q96N68 181 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 GPR82Q96P67 336 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 MRPS18CQ9Y3D5 142 aaKnown RBP10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 COL6A6A6NMZ7 2263 aa10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 A0A1W2PS18 150 aa10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 CLEC7AQ9BXN2 247 aa10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 CHD3Q12873 2000 aaKnown RBP10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 TICRRQ7Z2Z1 1910 aa10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 hDV102S1A0JD36 115 aa10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 FAM181BA6NEQ2 426 aa10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 FCGR2BP31994 310 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 THYN1Q9P016 225 aa10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 COLQQ9Y215 455 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 MLANAQ16655 118 aa10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 TDRG1Q3Y452 100 aa10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 NAA38Q9BRA0 125 aaKnown RBP10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 MRPL20Q9BYC9 149 aaKnown RBP10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 FNDC4Q9H6D8 234 aaPredicted RBP10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 PROK2Q9HC23 129 aa10.87□□□□□ -0.67
TRAPPC9-201ENST00000389328 NPIPB11E5RHQ5 1161 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 F2Z2F3 143 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 UBE2V1Q13404 147 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 MED13LQ71F56 2210 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 A1L4Q6 167 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 H3BUT2 72 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 UPK2O00526 184 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 AREGP15514 252 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 GPR183P32249 361 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 SCGB1D4Q6XE38 83 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 TSKUQ8WUA8 353 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 SCRT1Q9BWW7 348 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 IGHV2OR16-5A0A0B4J2B6 119 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 KIR2DL2P43627 348 aaPredicted RBP10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 PLA2G5P39877 138 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 COA6Q5JTJ3 125 aaKnown RBP10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 LOXL4Q96JB6 756 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 CHODLQ9H9P2 273 aa10.86□□□□□ -0.67
TRAPPC9-201ENST00000389328 A0A1B0GUT8 65 aa10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 CD69Q07108 199 aa10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 RBPMS2Q6ZRY4 209 aaKnown RBP10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 DEFB124Q8NES8 71 aa10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 CDX2Q99626 313 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 ZNF503-AS2A6NEH8 195 aa10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 MC5RP33032 325 aa10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 RIPPLY3P57055 190 aa10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 TRIP6Q15654 476 aaKnown RBP10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 PYGO2Q9BRQ0 406 aa10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 MBNL3Q9NUK0 354 aaKnown RBP10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 ATP5IP56385 69 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 C10orf55Q5SWW7 151 aa10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 ASPHD1Q5U4P2 390 aa10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 OSR1Q8TAX0 266 aaPredicted RBP10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 CACNG8Q8WXS5 425 aa10.85□□□□□ -0.67
TRAPPC9-201ENST00000389328 C7orf71A4D174 169 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 CIDEAO60543 219 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 YPEL3P61236 119 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 Q0VG73 95 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 MBNL2Q5VZF2 373 aaKnown RBP10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 GFRALQ6UXV0 394 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 EPDR1Q9UM22 224 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 S4R3C0 116 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 SMIM12Q96EX1 92 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 ZNF414Q96IQ9 312 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 CRYABP02511 175 aaKnown RBP10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 IGLC2P0DOY2 106 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 IGLC3P0DOY3 106 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 CCL3L1P16619 93 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 CD40P25942 277 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 ZNF138P52744 262 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 Q6ZVH6 145 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 CD177Q8N6Q3 437 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 NUP35Q8NFH5 326 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 MYOZ3Q8TDC0 251 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 FREM1Q5H8C1 2179 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 TRGV8A0A0C4DH27 118 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 IGHV3-35A0A0C4DH35 117 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 PRCDQ00LT1 54 aa10.84□□□□□ -0.67
TRAPPC9-201ENST00000389328 Q1RN00 199 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms