RNA–Protein interactions for RNA: ENST00000387416.2

MT-TS1-201, Transcript of mitochondrially encoded tRNA serine 1 (UCN), humanhuman

BASIC

Gene MT-TS1, Length 69 nt, Biotype Mt tRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MT-TS1-201ENST00000387416 LHFPL5Q8TAF8 219 aa6.41□□□□□ -1.38
MT-TS1-201ENST00000387416 RNASEH2CQ8TDP1 164 aaKnown RBP6.41□□□□□ -1.38
MT-TS1-201ENST00000387416 TMEM230Q96A57 120 aa6.41□□□□□ -1.38
MT-TS1-201ENST00000387416 PINX1Q96BK5 328 aaKnown RBP6.41□□□□□ -1.38
MT-TS1-201ENST00000387416 OR10C1Q96KK4 312 aa6.41□□□□□ -1.38
MT-TS1-201ENST00000387416 ASCL2Q99929 193 aa6.41□□□□□ -1.38
MT-TS1-201ENST00000387416 SPAG8Q99932 426 aaPredicted RBP6.41□□□□□ -1.38
MT-TS1-201ENST00000387416 C20orf24Q9BUV8 137 aa6.41□□□□□ -1.38
MT-TS1-201ENST00000387416 SRRQ9GZT4 340 aa6.41□□□□□ -1.38
MT-TS1-201ENST00000387416 MLXQ9UH92 298 aa6.41□□□□□ -1.38
MT-TS1-201ENST00000387416 U3KQ87 197 aa6.41□□□□□ -1.38
MT-TS1-201ENST00000387416 TRAV14DV4A0A0A6YYC5 116 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 IGHV3-35A0A0C4DH35 117 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 A0A0G2JRQ6 117 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 OR4C46A6NHA9 309 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 OR11H12B2RN74 326 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 FAM90A26D6RGX4 464 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 TSPAN4O14817 238 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 YIF1AO95070 293 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 TMEM50AO95807 157 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 SUPT4H1P63272 117 aaKnown RBP6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 SPINK9Q5DT21 86 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 NMSQ5H8A3 153 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 BTNL8Q6UX41 500 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 ZNF600Q6ZNG1 722 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 TMEM61Q8N0U2 210 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 CENPSQ8N2Z9 138 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 OR4X1Q8NH49 305 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 FAM110AQ9BQ89 295 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 SPATA25Q9BR10 227 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 TM2D3Q9BRN9 247 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 TMEM231Q9H6L2 316 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 HSPB7Q9UBY9 170 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 SMPXQ9UHP9 88 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 TMED3Q9Y3Q3 217 aa6.4□□□□□ -1.38
MT-TS1-201ENST00000387416 IGHV7-4-1A0A0J9YVY3 117 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 A0A1W2PS18 150 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 CLN5O75503 358 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 MED6O75586 246 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 VAMP1P23763 118 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 OPRK1P41145 380 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 TNFRSF9Q07011 255 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 HAGHQ16775 308 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 LYZL2Q7Z4W2 148 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 TMED4Q7Z7H5 227 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 TMEM116Q8NCL8 245 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 SLC24A4Q8NFF2 622 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 OR1S1Q8NH92 325 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 CACNG8Q8WXS5 425 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 WDR89Q96FK6 387 aaPredicted RBP6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 NARS2Q96I59 477 aaKnown RBP6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 RCHY1Q96PM5 261 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 RHPN1-AS1Q9BWJ2 59 aa6.39□□□□□ -1.39
MT-TS1-201ENST00000387416 C3orf84H3BNL1 204 aa6.38□□□□□ -1.39
MT-TS1-201ENST00000387416 SCAF4O95104 1147 aaKnown RBP6.38□□□□□ -1.39
MT-TS1-201ENST00000387416 NDUFB6O95139 128 aa6.38□□□□□ -1.39
MT-TS1-201ENST00000387416 SFT2D2O95562 160 aa6.38□□□□□ -1.39
MT-TS1-201ENST00000387416 IFNA10P01566 189 aa6.38□□□□□ -1.39
MT-TS1-201ENST00000387416 CD7P09564 240 aa6.38□□□□□ -1.39
MT-TS1-201ENST00000387416 NPPCP23582 126 aa6.38□□□□□ -1.39
MT-TS1-201ENST00000387416 NPY1RP25929 384 aa6.38□□□□□ -1.39
MT-TS1-201ENST00000387416 PAFAH1B2P68402 229 aa6.38□□□□□ -1.39
MT-TS1-201ENST00000387416 RPP30P78346 268 aaKnown RBP6.38□□□□□ -1.39
MT-TS1-201ENST00000387416 LINC00322Q6ZN03 302 aaPredicted RBP6.38□□□□□ -1.39
MT-TS1-201ENST00000387416 OR1S2Q8NGQ3 325 aa6.38□□□□□ -1.39
MT-TS1-201ENST00000387416 DTD1Q8TEA8 209 aa6.38□□□□□ -1.39
MT-TS1-201ENST00000387416 CIB3Q96Q77 187 aaPredicted RBP6.38□□□□□ -1.39
MT-TS1-201ENST00000387416 CHEK1O14757 476 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 PITX3O75364 302 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 IGHV3-48P01763 117 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 FABP1P07148 127 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 GPX4P36969 197 aaPredicted RBP6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 EIF2B2P49770 351 aaKnown RBP6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 YPEL3P61236 119 aaPredicted RBP6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 RAB11AP62491 216 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 BAK1Q16611 211 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 PRSS54Q6PEW0 395 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 TOMM20LQ6UXN7 152 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 DEFB125Q8N687 156 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 Q8WTZ3 238 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 GRAMD2BQ96HH9 432 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 CITED4Q96RK1 184 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 METTL26Q96S19 204 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 FNDC4Q9H6D8 234 aaPredicted RBP6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 VSIRQ9H7M9 311 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 SRD5A3Q9H8P0 318 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 PFDN2Q9UHV9 154 aa6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 PUS1Q9Y606 427 aaKnown RBP eCLIP6.37□□□□□ -1.39
MT-TS1-201ENST00000387416 TRAV2A0A0B4J234 112 aa6.36□□□□□ -1.39
MT-TS1-201ENST00000387416 UBE2CO00762 179 aa6.36□□□□□ -1.39
MT-TS1-201ENST00000387416 IFNA21P01568 189 aa6.36□□□□□ -1.39
MT-TS1-201ENST00000387416 IGKV1-17P01599 117 aa6.36□□□□□ -1.39
MT-TS1-201ENST00000387416 IFNA4P05014 189 aa6.36□□□□□ -1.39
MT-TS1-201ENST00000387416 IL7P13232 177 aa6.36□□□□□ -1.39
MT-TS1-201ENST00000387416 EDN2P20800 178 aa6.36□□□□□ -1.39
MT-TS1-201ENST00000387416 OR10J1P30954 320 aa6.36□□□□□ -1.39
MT-TS1-201ENST00000387416 NUP62P37198 522 aaPredicted RBP6.36□□□□□ -1.39
MT-TS1-201ENST00000387416 RND2P52198 227 aa6.36□□□□□ -1.39
MT-TS1-201ENST00000387416 PPP1R1AQ13522 171 aa6.36□□□□□ -1.39
MT-TS1-201ENST00000387416 COQ8AQ8NI60 647 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms