RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 XKRY2A2RUG3 117 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 CLPSL1A2RUU4 121 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR5B21A6NL26 309 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 C12orf77C9JDV5 145 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 H3BNH8 94 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 SDCBPO00560 298 aaPredicted RBP-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 CDC42EP2O14613 210 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 RER1O15258 196 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 CCL16O15467 120 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 FLOT1O75955 427 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 ATG12O94817 140 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR2A4O95047 310 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 TTC4O95801 387 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 RPS17P08708 135 aaKnown RBP-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR4E1P0C645 316 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 SLC2A3P11169 496 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 PIPP12273 146 aaPredicted RBP-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 TNNI1P19237 187 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 FGF9P31371 208 aaPredicted RBP-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 GPR6P46095 362 aaPredicted RBP-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 XCL1P47992 114 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 NPY2RP49146 381 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 MRPL12P52815 198 aaKnown RBP-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 MESDQ14696 234 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 FXYD3Q14802 87 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 GRK1Q15835 563 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 TAF12Q16514 161 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 CDO1Q16878 200 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 HFEQ30201 348 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 CDNFQ49AH0 187 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 TMEM78Q5T7P6 136 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 PRAMEF5Q5TYX0 476 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 FKBP1CQ5VVH2 108 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 PRAMEF6Q5VXH4 476 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 TRAT1Q6PIZ9 186 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 PPP1R21Q6ZMI0 780 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 CCDC186Q7Z3E2 898 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 TEN1Q86WV5 123 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR4D5Q8NGN0 318 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR2G2Q8NGZ5 317 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR2T4Q8NH00 348 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR2T27Q8NH04 317 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR8K3Q8NH51 312 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 TERB2Q8NHR7 220 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 STOML3Q8TAV4 291 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 TMCO6Q96DC7 493 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 SCGB3A1Q96QR1 104 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR2A7Q96R45 310 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 P2RY13Q9BPV8 354 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 MICU1Q9BPX6 476 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 TMEM175Q9BSA9 504 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 MRPL20Q9BYC9 149 aaKnown RBP-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 TMEM126AQ9H061 195 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 NMRAL1Q9HBL8 299 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 LPAR2Q9HBW0 351 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 VAT1LQ9HCJ6 419 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 PRMT8Q9NR22 394 aaPredicted RBP-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 RRN3Q9NYV6 651 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 ORMDL1Q9P0S3 153 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 SCP2D1Q9UJQ7 156 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 TMEM98Q9Y2Y6 226 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 V9GYV3 84 aa-2.06□□□□□ -2.74
RNU6-540P-201ENST00000384622 ABCC3O15438 1527 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 ZFYVE9O95405 1425 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 NINLQ9Y2I6 1382 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 IGHV2OR16-5A0A0B4J2B6 119 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 TCRBV9S1A1TA0A576 114 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 IRGMA1A4Y4 181 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 C9orf170A2RU37 121 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 C7orf77A4D0Y5 90 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR6C65A6NJZ3 312 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 LRRN3E7EW58 273 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 H3BUA1 57 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 CTDSP2O14595 271 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 SH2D1BO14796 132 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 CCNB2O95067 398 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 PLEKHA8P1O95397 391 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 LSM8O95777 96 aaKnown RBP-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 IAPPP10997 89 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 HTN3P15516 51 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 SERPINA2P20848 420 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 GLRA2P23416 452 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 TM4SF1P30408 202 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 ATP5C1P36542 298 aaKnown RBP-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 GMPSP49915 693 aaPredicted RBP-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 SMSP52788 366 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 CAPZA1P52907 286 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 TAS2R41P59536 307 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 EIF3EP60228 445 aaKnown RBP-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 SNAP25P60880 206 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 HSF2Q03933 536 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 RTL8BQ17RB0 113 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 HBMQ6B0K9 141 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 PNCKQ6P2M8 343 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 Q6ZQT0 140 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 STHQ8IWL8 128 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 OR5AS1Q8N127 324 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 ZADH2Q8N4Q0 377 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 SERP2Q8N6R1 65 aa-2.07□□□□□ -2.74
RNU6-540P-201ENST00000384622 CEP112Q8N8E3 955 aa-2.07□□□□□ -2.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms