RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 TRAV40A0A0B4J280 105 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 SLC17A3O00476 420 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 OR9G9P0C7N8 305 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 DSCR9P59020 149 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 FAM209BQ5JX69 171 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 DNLZQ5SXM8 178 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 IL36BQ9NZH7 164 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 MRPS16Q9Y3D3 137 aaKnown RBP12.38□□□□□ -0.43
SNPH-202ENST00000381873 ATP5G3P48201 142 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 BMPERQ8N8U9 685 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 FMC1Q96HJ9 113 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 THADAQ6YHU6 1953 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 HTN3P15516 51 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 CDX1P47902 265 aaPredicted RBP12.38□□□□□ -0.43
SNPH-202ENST00000381873 ZNF414Q96IQ9 312 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 WFIKKN1Q96NZ8 548 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 A0A087WV48 116 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 SRP19P09132 144 aaKnown RBP12.38□□□□□ -0.43
SNPH-202ENST00000381873 WNT2P09544 360 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 PAX1P15863 534 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 JOSD1Q15040 202 aaPredicted RBP12.38□□□□□ -0.43
SNPH-202ENST00000381873 SLC25A28Q96A46 364 aa12.38□□□□□ -0.43
SNPH-202ENST00000381873 MUC21A0A0G2JKD1 596 aa12.37□□□□□ -0.43
SNPH-202ENST00000381873 MUC21A0A140T8X8 626 aa12.37□□□□□ -0.43
SNPH-202ENST00000381873 RNF222A6NCQ9 220 aa12.37□□□□□ -0.43
SNPH-202ENST00000381873 MUC21Q5SSG8 566 aa12.37□□□□□ -0.43
SNPH-202ENST00000381873 PAQR4Q8N4S7 273 aaPredicted RBP12.37□□□□□ -0.43
SNPH-202ENST00000381873 FABP5P3A8MUU1 101 aa12.37□□□□□ -0.43
SNPH-202ENST00000381873 FER1L6-AS1Q8NA97 138 aa12.37□□□□□ -0.43
SNPH-202ENST00000381873 ARFGEF3Q5TH69 2177 aa12.37□□□□□ -0.43
SNPH-202ENST00000381873 RPP21Q9H633 154 aaKnown RBP12.37□□□□□ -0.43
SNPH-202ENST00000381873 SOX21Q9Y651 276 aaPredicted RBP12.37□□□□□ -0.43
SNPH-202ENST00000381873 EMP1P54849 157 aa12.37□□□□□ -0.43
SNPH-202ENST00000381873 C18orf15Q96N68 181 aa12.37□□□□□ -0.43
SNPH-202ENST00000381873 SDF2L1Q9HCN8 221 aa12.37□□□□□ -0.43
SNPH-202ENST00000381873 TRAV14DV4A0A0A6YYC5 116 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 ATP5LO75964 103 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 RNASE1P07998 156 aaKnown RBP12.36□□□□□ -0.43
SNPH-202ENST00000381873 PRCDQ00LT1 54 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 ID3Q02535 119 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 LINC00518Q8N0U6 118 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 OR13C6PQ8NH95 151 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 ASCL2Q99929 193 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 FER1L5A0AVI2 2057 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 IGKV1-12A0A0C4DH73 117 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 IGKV1D-12P01611 117 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 LDLRAD2Q5SZI1 272 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 HEPN1Q6WQI6 88 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 OTORQ9NRC9 128 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 TMEM160Q9NX00 188 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 A0A1B0GW15 77 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 RAMP3O60896 148 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 NABP1Q96AH0 204 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 LOC102724200A0A096LPH7 203 aaPredicted RBP12.36□□□□□ -0.43
SNPH-202ENST00000381873 TMEM167AQ8TBQ9 72 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 MRAP2Q96G30 205 aa12.36□□□□□ -0.43
SNPH-202ENST00000381873 DUSP14O95147 198 aaKnown RBP12.35□□□□□ -0.43
SNPH-202ENST00000381873 SOD3P08294 240 aa12.35□□□□□ -0.43
SNPH-202ENST00000381873 RNASE4P34096 147 aaKnown RBP12.35□□□□□ -0.43
SNPH-202ENST00000381873 EFNB1P98172 346 aa12.35□□□□□ -0.43
SNPH-202ENST00000381873 UNQ6494/PRO21346Q6UXR6 183 aa12.35□□□□□ -0.43
SNPH-202ENST00000381873 C20orf204Q6ZNR8 217 aa12.35□□□□□ -0.43
SNPH-202ENST00000381873 F11RQ9Y624 299 aaKnown RBP12.35□□□□□ -0.43
SNPH-202ENST00000381873 C18orf12Q96KH6 178 aa12.35□□□□□ -0.43
SNPH-202ENST00000381873 CARHSP1Q9Y2V2 147 aaKnown RBP12.35□□□□□ -0.43
SNPH-202ENST00000381873 SLC25A15Q9Y619 301 aa12.35□□□□□ -0.43
SNPH-202ENST00000381873 TRAV8-6A0A0B4J262 113 aa12.35□□□□□ -0.43
SNPH-202ENST00000381873 STHQ8IWL8 128 aa12.35□□□□□ -0.43
SNPH-202ENST00000381873 MPDZO75970 2070 aa12.35□□□□□ -0.43
SNPH-202ENST00000381873 J3QRE1 110 aa12.35□□□□□ -0.43
SNPH-202ENST00000381873 SELLP14151 372 aa12.35□□□□□ -0.43
SNPH-202ENST00000381873 ZNF324BQ6AW86 544 aaPredicted RBP12.35□□□□□ -0.43
SNPH-202ENST00000381873 Q6ZS92 163 aa12.35□□□□□ -0.43
SNPH-202ENST00000381873 TCRBV4S1A1TA0A5B7 111 aa12.34□□□□□ -0.43
SNPH-202ENST00000381873 GLRX5Q86SX6 157 aa12.34□□□□□ -0.43
SNPH-202ENST00000381873 ATOH7Q8N100 152 aa12.34□□□□□ -0.43
SNPH-202ENST00000381873 MDS2Q8NDY4 140 aa12.34□□□□□ -0.43
SNPH-202ENST00000381873 SCGB3A1Q96QR1 104 aa12.34□□□□□ -0.43
SNPH-202ENST00000381873 SHANK1Q9Y566 2161 aa12.34□□□□□ -0.43
SNPH-202ENST00000381873 Q0VFX4 171 aa12.34□□□□□ -0.43
SNPH-202ENST00000381873 APOHP02749 345 aaPredicted RBP12.34□□□□□ -0.43
SNPH-202ENST00000381873 LEMD1Q68G75 181 aa12.34□□□□□ -0.43
SNPH-202ENST00000381873 FAM71F2Q6NXP2 309 aa12.34□□□□□ -0.43
SNPH-202ENST00000381873 ORMDL3Q8N138 153 aa12.34□□□□□ -0.43
SNPH-202ENST00000381873 C11orf44Q8N8P7 122 aa12.34□□□□□ -0.43
SNPH-202ENST00000381873 DPRXA6NFQ7 191 aa12.33□□□□□ -0.43
SNPH-202ENST00000381873 DNAL4O96015 105 aa12.33□□□□□ -0.43
SNPH-202ENST00000381873 CD55P08174 381 aa12.33□□□□□ -0.43
SNPH-202ENST00000381873 KIAA2026Q5HYC2 2103 aa12.33□□□□□ -0.44
SNPH-202ENST00000381873 IGKV1D-8A0A087WSZ0 117 aa12.33□□□□□ -0.44
SNPH-202ENST00000381873 RNF126Q9BV68 326 aa12.33□□□□□ -0.44
SNPH-202ENST00000381873 A8MXK9 166 aa12.33□□□□□ -0.44
SNPH-202ENST00000381873 SCGB1A1P11684 91 aa12.33□□□□□ -0.44
SNPH-202ENST00000381873 GNLYP22749 145 aa12.33□□□□□ -0.44
SNPH-202ENST00000381873 CCL20P78556 96 aa12.33□□□□□ -0.44
SNPH-202ENST00000381873 C2orf88Q9BSF0 95 aa12.33□□□□□ -0.44
SNPH-202ENST00000381873 ALKBH7Q9BT30 221 aaPredicted RBP12.33□□□□□ -0.44
SNPH-202ENST00000381873 A0A1W2PRE2 83 aa12.33□□□□□ -0.44
SNPH-202ENST00000381873 B4DSR2 109 aa12.33□□□□□ -0.44
SNPH-202ENST00000381873 CD7P09564 240 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms