RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 C5orf52A6NGY3 159 aa14.24□□□□□ -0.13
SGCB-201ENST00000381431 C9JQL5 133 aa14.24□□□□□ -0.13
SGCB-201ENST00000381431 DLX1P56177 255 aa14.24□□□□□ -0.13
SGCB-201ENST00000381431 HERVK_113P61574 105 aa14.24□□□□□ -0.13
SGCB-201ENST00000381431 TREML4Q6UXN2 200 aa14.24□□□□□ -0.13
SGCB-201ENST00000381431 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.23□□□□□ -0.13
SGCB-201ENST00000381431 CA1P00915 261 aaPredicted RBP14.23□□□□□ -0.13
SGCB-201ENST00000381431 RPL13AP40429 203 aaKnown RBP14.23□□□□□ -0.13
SGCB-201ENST00000381431 TMEM136Q6ZRR5 245 aa14.23□□□□□ -0.13
SGCB-201ENST00000381431 LHFPL4Q7Z7J7 247 aa14.23□□□□□ -0.13
SGCB-201ENST00000381431 ST6GALNAC6Q969X2 333 aa14.23□□□□□ -0.13
SGCB-201ENST00000381431 HIGD1CA8MV81 97 aa14.23□□□□□ -0.13
SGCB-201ENST00000381431 GFRA3O60609 400 aa14.23□□□□□ -0.13
SGCB-201ENST00000381431 NPPCP23582 126 aa14.23□□□□□ -0.13
SGCB-201ENST00000381431 IGHV1-46P01743 117 aa14.23□□□□□ -0.13
SGCB-201ENST00000381431 GCSHP23434 173 aa14.23□□□□□ -0.13
SGCB-201ENST00000381431 ATP5J2P56134 94 aa14.23□□□□□ -0.13
SGCB-201ENST00000381431 SSBP4Q9BWG4 385 aaPredicted RBP14.23□□□□□ -0.13
SGCB-201ENST00000381431 PHLDA3Q9Y5J5 127 aa14.23□□□□□ -0.13
SGCB-201ENST00000381431 TRAV3A0A0B4J244 114 aa14.23□□□□□ -0.13
SGCB-201ENST00000381431 SNAI2O43623 268 aa14.23□□□□□ -0.13
SGCB-201ENST00000381431 C18orf15Q96N68 181 aa14.23□□□□□ -0.13
SGCB-201ENST00000381431 C12orf54Q6X4T0 127 aa14.22□□□□□ -0.13
SGCB-201ENST00000381431 KIR3DL3Q8N743 410 aa14.22□□□□□ -0.13
SGCB-201ENST00000381431 DMRTA2Q96SC8 542 aa14.22□□□□□ -0.13
SGCB-201ENST00000381431 MAP1LC3AQ9H492 121 aa14.22□□□□□ -0.13
SGCB-201ENST00000381431 F11RQ9Y624 299 aaKnown RBP14.22□□□□□ -0.13
SGCB-201ENST00000381431 CD69Q07108 199 aa14.22□□□□□ -0.13
SGCB-201ENST00000381431 TCF24Q7RTU0 167 aa14.22□□□□□ -0.13
SGCB-201ENST00000381431 DERL1Q9BUN8 251 aa14.22□□□□□ -0.13
SGCB-201ENST00000381431 C21orf62Q9NYP8 219 aa14.22□□□□□ -0.13
SGCB-201ENST00000381431 SONP18583 2426 aaKnown RBP14.22□□□□□ -0.13
SGCB-201ENST00000381431 IGKV3-20P01619 116 aa14.22□□□□□ -0.13
SGCB-201ENST00000381431 SRSF4Q08170 494 aaKnown RBP14.22□□□□□ -0.13
SGCB-201ENST00000381431 DYNLRB2Q8TF09 96 aa14.22□□□□□ -0.13
SGCB-201ENST00000381431 GGTLC1Q9BX51 225 aa14.22□□□□□ -0.13
SGCB-201ENST00000381431 PRR14LQ5THK1 2151 aa14.22□□□□□ -0.13
SGCB-201ENST00000381431 GPR183P32249 361 aa14.21□□□□□ -0.13
SGCB-201ENST00000381431 ID1P41134 155 aa14.21□□□□□ -0.13
SGCB-201ENST00000381431 GPR82Q96P67 336 aa14.21□□□□□ -0.13
SGCB-201ENST00000381431 AUP1Q9Y679 476 aa14.21□□□□□ -0.13
SGCB-201ENST00000381431 LINC00473A8K010 186 aa14.21□□□□□ -0.13
SGCB-201ENST00000381431 CYB5R2Q6BCY4 276 aa14.21□□□□□ -0.13
SGCB-201ENST00000381431 CD177Q8N6Q3 437 aa14.21□□□□□ -0.13
SGCB-201ENST00000381431 TEX45Q8NA69 505 aa14.21□□□□□ -0.13
SGCB-201ENST00000381431 RNASEH2CQ8TDP1 164 aaKnown RBP14.21□□□□□ -0.13
SGCB-201ENST00000381431 TMEM170AQ8WVE7 144 aa14.21□□□□□ -0.13
SGCB-201ENST00000381431 COL25A1Q9BXS0 654 aaPredicted RBP14.21□□□□□ -0.13
SGCB-201ENST00000381431 FBXL7Q9UJT9 491 aa14.21□□□□□ -0.13
SGCB-201ENST00000381431 M0R3E3 92 aa14.21□□□□□ -0.13
SGCB-201ENST00000381431 ZNF600Q6ZNG1 722 aa14.21□□□□□ -0.13
SGCB-201ENST00000381431 TMEM70Q9BUB7 260 aa14.21□□□□□ -0.13
SGCB-201ENST00000381431 PTPN13Q12923 2485 aa14.21□□□□□ -0.14
SGCB-201ENST00000381431 TRAV5A0A0B4J249 113 aa14.21□□□□□ -0.14
SGCB-201ENST00000381431 MYOD1P15172 320 aa14.21□□□□□ -0.14
SGCB-201ENST00000381431 SPATA31B1PQ5VZV4 182 aa14.21□□□□□ -0.14
SGCB-201ENST00000381431 A0A1B0GUT8 65 aa14.2□□□□□ -0.14
SGCB-201ENST00000381431 UBE2CO00762 179 aa14.2□□□□□ -0.14
SGCB-201ENST00000381431 PSG9Q00887 426 aa14.2□□□□□ -0.14
SGCB-201ENST00000381431 TEX38Q6PEX7 206 aa14.2□□□□□ -0.14
SGCB-201ENST00000381431 RPUSD1Q9UJJ7 312 aaKnown RBP14.2□□□□□ -0.14
SGCB-201ENST00000381431 FREM1Q5H8C1 2179 aa14.2□□□□□ -0.14
SGCB-201ENST00000381431 A0A1W2PS18 150 aa14.2□□□□□ -0.14
SGCB-201ENST00000381431 GAGE10A6NGK3 116 aa14.2□□□□□ -0.14
SGCB-201ENST00000381431 PPP1R27Q86WC6 154 aa14.2□□□□□ -0.14
SGCB-201ENST00000381431 HIST1H2BLQ99880 126 aa14.2□□□□□ -0.14
SGCB-201ENST00000381431 Q9H3A6 140 aa14.2□□□□□ -0.14
SGCB-201ENST00000381431 SFTPCP11686 197 aa14.2□□□□□ -0.14
SGCB-201ENST00000381431 ADMP35318 185 aa14.2□□□□□ -0.14
SGCB-201ENST00000381431 TMEM14EPQ6UXP3 125 aa14.2□□□□□ -0.14
SGCB-201ENST00000381431 OR1N2Q8NGR9 330 aa14.2□□□□□ -0.14
SGCB-201ENST00000381431 COQ2Q96H96 371 aa14.2□□□□□ -0.14
SGCB-201ENST00000381431 SEPSECSQ9HD40 501 aaKnown RBP14.2□□□□□ -0.14
SGCB-201ENST00000381431 IGKV1-6A0A0C4DH72 117 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 NUDT3O95989 172 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 GPX1P07203 203 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 CDKN1AP38936 164 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 TAS2R60P59551 318 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 PRCDQ00LT1 54 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 Q6P435 159 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 ANKHD1Q8IWZ3 2542 aaKnown RBP14.19□□□□□ -0.14
SGCB-201ENST00000381431 C7orf71A4D174 169 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 PRR31Q5SQ13 230 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 LIME1Q9H400 295 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 TRBV20OR9-2A0A075B6H5 130 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 CIDEAO60543 219 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 SAPCD1Q5SSQ6 148 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 EBLN2Q6P2I7 272 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 RNASE6Q93091 150 aaKnown RBP14.19□□□□□ -0.14
SGCB-201ENST00000381431 PMCHL2Q9BQD1 86 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 NRN1Q9NPD7 142 aa14.19□□□□□ -0.14
SGCB-201ENST00000381431 MLNRO43193 412 aa14.18□□□□□ -0.14
SGCB-201ENST00000381431 ATP5G2Q06055 141 aa14.18□□□□□ -0.14
SGCB-201ENST00000381431 SRSF7Q16629 238 aaKnown RBP eCLIP14.18□□□□□ -0.14
SGCB-201ENST00000381431 TMEM133Q9H2Q1 129 aa14.18□□□□□ -0.14
SGCB-201ENST00000381431 PLSCR4Q9NRQ2 329 aa14.18□□□□□ -0.14
SGCB-201ENST00000381431 TRBV24-1A0A075B6N3 115 aa14.18□□□□□ -0.14
SGCB-201ENST00000381431 TIMP3P35625 211 aa14.18□□□□□ -0.14
SGCB-201ENST00000381431 KLRB1Q12918 225 aa14.18□□□□□ -0.14
SGCB-201ENST00000381431 MST1LQ2TV78 715 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms