RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 LINC00479Q96M42 142 aa9.37□□□□□ -0.91
SMAD9-202ENST00000379826 K7EN84 100 aa9.36□□□□□ -0.91
SMAD9-202ENST00000379826 DNAH14Q0VDD8 3507 aa9.36□□□□□ -0.91
SMAD9-202ENST00000379826 COTL1Q14019 142 aa9.36□□□□□ -0.91
SMAD9-202ENST00000379826 OR10J3Q5JRS4 329 aa9.36□□□□□ -0.91
SMAD9-202ENST00000379826 MUC15Q8N387 334 aa9.36□□□□□ -0.91
SMAD9-202ENST00000379826 SFXN3Q9BWM7 321 aa9.36□□□□□ -0.91
SMAD9-202ENST00000379826 MRPL32Q9BYC8 188 aaKnown RBP9.36□□□□□ -0.91
SMAD9-202ENST00000379826 IGKV1D-17A0A075B6S4 117 aa9.36□□□□□ -0.91
SMAD9-202ENST00000379826 RPL15P61313 204 aaKnown RBP9.36□□□□□ -0.91
SMAD9-202ENST00000379826 UPK2O00526 184 aa9.36□□□□□ -0.91
SMAD9-202ENST00000379826 NPPCP23582 126 aa9.36□□□□□ -0.91
SMAD9-202ENST00000379826 DEFB121Q5J5C9 76 aa9.36□□□□□ -0.91
SMAD9-202ENST00000379826 ZCCHC24Q8N2G6 241 aaKnown RBP9.36□□□□□ -0.91
SMAD9-202ENST00000379826 FAM57AQ8TBR7 257 aa9.36□□□□□ -0.91
SMAD9-202ENST00000379826 FCER1GP30273 86 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 TDRG1Q3Y452 100 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 C5orf30Q96GV9 206 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 HSPB8Q9UJY1 196 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 ARHGAP21Q5T5U3 1957 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 CCL3L1P16619 93 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 HBBP68871 147 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 Q8NFD4 153 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 AAMDCQ9H7C9 122 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 DIDO1Q9BTC0 2240 aaKnown RBP9.35□□□□□ -0.91
SMAD9-202ENST00000379826 MUC21A0A0G2JKD1 596 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 MUC21A0A140T8X8 626 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 OR4C46A6NHA9 309 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 A8MWL6 223 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 S100A7P31151 101 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 MUC21Q5SSG8 566 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 TMEM144Q7Z5S9 345 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 EML6Q6ZMW3 1958 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 PPIAL4EA0A075B759 164 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.35□□□□□ -0.91
SMAD9-202ENST00000379826 PPIAL4DF5H284 164 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 PPIAL4FP0DN26 164 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 ERVK11-1P61568 191 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 TMEM70Q9BUB7 260 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 S4R3C0 116 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 A0A0C4DFX4 3053 aa9.35□□□□□ -0.91
SMAD9-202ENST00000379826 A0A1W2PS18 150 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 C3orf79P0CE67 100 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 BPIFA4PQ86YQ2 179 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 SHANK1Q9Y566 2161 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 CD24P25063 80 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 OSTCQ9NRP0 149 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 TYMSP04818 313 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 FAM27E3Q08E93 113 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 SRSF6Q13247 344 aaKnown RBP9.34□□□□□ -0.91
SMAD9-202ENST00000379826 DUX4L9Q6RFH8 374 aaPredicted RBP9.34□□□□□ -0.91
SMAD9-202ENST00000379826 ZNF841Q6ZN19 808 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 GOLT1AQ6ZVE7 132 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 SRSF12Q8WXF0 261 aaKnown RBP9.34□□□□□ -0.91
SMAD9-202ENST00000379826 RIF1Q5UIP0 2472 aaKnown RBP9.34□□□□□ -0.91
SMAD9-202ENST00000379826 DOCK11Q5JSL3 2073 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 FAM181BA6NEQ2 426 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 RIGQ13278 110 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 C10orf55Q5SWW7 151 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 S100A7AQ86SG5 101 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 NUDT10Q8NFP7 164 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 OR52E5Q8NH55 327 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 RNASE6Q93091 150 aaKnown RBP9.34□□□□□ -0.91
SMAD9-202ENST00000379826 NUDT11Q96G61 164 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 FOXA2Q9Y261 457 aaPredicted RBP9.34□□□□□ -0.91
SMAD9-202ENST00000379826 INSIG2Q9Y5U4 225 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 GPX1P07203 203 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 SRD5A1P18405 259 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 PPOXP50336 477 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 SLC25A34Q6PIV7 304 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 UNQ5815/PRO19632Q6UWF5 114 aa9.34□□□□□ -0.91
SMAD9-202ENST00000379826 FER1L5A0AVI2 2057 aa9.34□□□□□ -0.92
SMAD9-202ENST00000379826 NCOA6Q14686 2063 aaPredicted RBP9.34□□□□□ -0.92
SMAD9-202ENST00000379826 FAM90A9PA6NNJ1 464 aa9.33□□□□□ -0.92
SMAD9-202ENST00000379826 SMIM15Q7Z3B0 74 aa9.33□□□□□ -0.92
SMAD9-202ENST00000379826 ASCL2Q99929 193 aa9.33□□□□□ -0.92
SMAD9-202ENST00000379826 C9JCJ5 164 aa9.33□□□□□ -0.92
SMAD9-202ENST00000379826 NMUP48645 174 aa9.33□□□□□ -0.92
SMAD9-202ENST00000379826 ZNF134P52741 427 aa9.33□□□□□ -0.92
SMAD9-202ENST00000379826 PRCDQ00LT1 54 aa9.33□□□□□ -0.92
SMAD9-202ENST00000379826 MUC6Q6W4X9 2439 aa9.33□□□□□ -0.92
SMAD9-202ENST00000379826 STXBP6Q8NFX7 210 aa9.33□□□□□ -0.92
SMAD9-202ENST00000379826 RCHY1Q96PM5 261 aa9.33□□□□□ -0.92
SMAD9-202ENST00000379826 MCRIP2Q9BUT9 160 aaKnown RBP9.33□□□□□ -0.92
SMAD9-202ENST00000379826 C19orf24Q9BVV8 132 aa9.33□□□□□ -0.92
SMAD9-202ENST00000379826 CORTO00230 105 aa9.33□□□□□ -0.92
SMAD9-202ENST00000379826 RPL27AP46776 148 aaKnown RBP9.33□□□□□ -0.92
SMAD9-202ENST00000379826 PRRX1P54821 245 aa9.33□□□□□ -0.92
SMAD9-202ENST00000379826 MAJINQ3KP22 176 aa9.33□□□□□ -0.92
SMAD9-202ENST00000379826 NIT1Q86X76 327 aa9.33□□□□□ -0.92
SMAD9-202ENST00000379826 IGKV1-16P04430 117 aa9.32□□□□□ -0.92
SMAD9-202ENST00000379826 OR4C13Q8NGP0 309 aa9.32□□□□□ -0.92
SMAD9-202ENST00000379826 TSKUQ8WUA8 353 aa9.32□□□□□ -0.92
SMAD9-202ENST00000379826 RAB37Q96AX2 223 aa9.32□□□□□ -0.92
SMAD9-202ENST00000379826 RPP21Q9H633 154 aaKnown RBP9.32□□□□□ -0.92
SMAD9-202ENST00000379826 OR2J3O76001 311 aa9.32□□□□□ -0.92
SMAD9-202ENST00000379826 LMO1P25800 156 aa9.32□□□□□ -0.92
SMAD9-202ENST00000379826 ARF6P62330 175 aa9.32□□□□□ -0.92
SMAD9-202ENST00000379826 C5orf17Q8NAS9 161 aa9.32□□□□□ -0.92
SMAD9-202ENST00000379826 VKORC1Q9BQB6 163 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms