RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 PLEKHA3Q9HB20 300 aa15.64■□□□□ 0.09
SSU72-204ENST00000378726 ZNF705GA8MUZ8 300 aaPredicted RBP15.63■□□□□ 0.09
SSU72-204ENST00000378726 C17orf112F2Z3M2 114 aa15.63■□□□□ 0.09
SSU72-204ENST00000378726 LY6LH3BQJ8 138 aa15.63■□□□□ 0.09
SSU72-204ENST00000378726 LGALS7P47929 136 aa15.63■□□□□ 0.09
SSU72-204ENST00000378726 ATP5G3P48201 142 aa15.63■□□□□ 0.09
SSU72-204ENST00000378726 ACOT6Q3I5F7 207 aaPredicted RBP15.63■□□□□ 0.09
SSU72-204ENST00000378726 OR11H6Q8NGC7 330 aa15.63■□□□□ 0.09
SSU72-204ENST00000378726 TMEM167AQ8TBQ9 72 aa15.63■□□□□ 0.09
SSU72-204ENST00000378726 CCL19Q99731 98 aa15.63■□□□□ 0.09
SSU72-204ENST00000378726 GCGP01275 180 aa15.63■□□□□ 0.09
SSU72-204ENST00000378726 TYMSP04818 313 aa15.63■□□□□ 0.09
SSU72-204ENST00000378726 NUTF2P61970 127 aaKnown RBP15.63■□□□□ 0.09
SSU72-204ENST00000378726 FAM78BQ5VT40 261 aa15.63■□□□□ 0.09
SSU72-204ENST00000378726 C1orf122Q6ZSJ8 110 aa15.63■□□□□ 0.09
SSU72-204ENST00000378726 SLC24A4Q8NFF2 622 aa15.63■□□□□ 0.09
SSU72-204ENST00000378726 OR4A5Q8NH83 315 aa15.63■□□□□ 0.09
SSU72-204ENST00000378726 SNRPCP09234 159 aaKnown RBP15.62■□□□□ 0.09
SSU72-204ENST00000378726 NPY1RP25929 384 aa15.62■□□□□ 0.09
SSU72-204ENST00000378726 CD1BP29016 333 aa15.62■□□□□ 0.09
SSU72-204ENST00000378726 LCN2P80188 198 aa15.62■□□□□ 0.09
SSU72-204ENST00000378726 VMA21Q3ZAQ7 101 aa15.62■□□□□ 0.09
SSU72-204ENST00000378726 LINC01551Q86U37 167 aa15.62■□□□□ 0.09
SSU72-204ENST00000378726 DERL1Q9BUN8 251 aa15.62■□□□□ 0.09
SSU72-204ENST00000378726 SLC25A17O43808 307 aa15.62■□□□□ 0.09
SSU72-204ENST00000378726 CA2P00918 260 aa15.62■□□□□ 0.09
SSU72-204ENST00000378726 HTR1DP28221 377 aa15.62■□□□□ 0.09
SSU72-204ENST00000378726 LMO4P61968 165 aa15.62■□□□□ 0.09
SSU72-204ENST00000378726 LDLRAD2Q5SZI1 272 aa15.62■□□□□ 0.09
SSU72-204ENST00000378726 WDR83OSQ9Y284 106 aa15.62■□□□□ 0.09
SSU72-204ENST00000378726 PRSS46E5RG02 174 aa15.61■□□□□ 0.09
SSU72-204ENST00000378726 KLRD1Q13241 179 aa15.61■□□□□ 0.09
SSU72-204ENST00000378726 CST9LP1Q5W188 147 aa15.61■□□□□ 0.09
SSU72-204ENST00000378726 HCP5Q6MZN7 132 aa15.61■□□□□ 0.09
SSU72-204ENST00000378726 OR1L8Q8NGR8 309 aa15.61■□□□□ 0.09
SSU72-204ENST00000378726 NDUFA4L2Q9NRX3 87 aa15.61■□□□□ 0.09
SSU72-204ENST00000378726 DPM3Q9P2X0 92 aa15.61■□□□□ 0.09
SSU72-204ENST00000378726 ASH1LQ9NR48 2969 aaKnown RBP15.61■□□□□ 0.09
SSU72-204ENST00000378726 MED13LQ71F56 2210 aa15.6■□□□□ 0.09
SSU72-204ENST00000378726 PGPEP1LA6NFU8 196 aa15.6■□□□□ 0.09
SSU72-204ENST00000378726 NDUFB4O95168 129 aa15.6■□□□□ 0.09
SSU72-204ENST00000378726 KCNIP4Q6PIL6 250 aa15.6■□□□□ 0.09
SSU72-204ENST00000378726 ZNF114Q8NC26 417 aa15.6■□□□□ 0.09
SSU72-204ENST00000378726 OR10W1Q8NGF6 305 aa15.6■□□□□ 0.09
SSU72-204ENST00000378726 ZNF430Q9H8G1 570 aaPredicted RBP15.6■□□□□ 0.09
SSU72-204ENST00000378726 E7EUB6 86 aa15.6■□□□□ 0.09
SSU72-204ENST00000378726 SRSF1Q07955 248 aaKnown RBP eCLIP15.6■□□□□ 0.09
SSU72-204ENST00000378726 TPTE2P1Q5T6R2 138 aa15.6■□□□□ 0.09
SSU72-204ENST00000378726 VMO1Q7Z5L0 202 aa15.59■□□□□ 0.09
SSU72-204ENST00000378726 KIR3DL3Q8N743 410 aa15.59■□□□□ 0.09
SSU72-204ENST00000378726 TMEM68Q96MH6 324 aa15.59■□□□□ 0.09
SSU72-204ENST00000378726 A0A0U1RQK1 487 aa15.59■□□□□ 0.09
SSU72-204ENST00000378726 A0A1W2PRD5 423 aa15.59■□□□□ 0.09
SSU72-204ENST00000378726 A0A1W2PRF3 423 aa15.59■□□□□ 0.09
SSU72-204ENST00000378726 A0A1W2PRM7 423 aa15.59■□□□□ 0.09
SSU72-204ENST00000378726 ZNF320A2RRD8 509 aa15.59■□□□□ 0.09
SSU72-204ENST00000378726 PDE6DO43924 150 aa15.59■□□□□ 0.09
SSU72-204ENST00000378726 RPL15P61313 204 aaKnown RBP15.59■□□□□ 0.09
SSU72-204ENST00000378726 PAX2Q02962 417 aa15.59■□□□□ 0.09
SSU72-204ENST00000378726 TEX45Q8NA69 505 aa15.59■□□□□ 0.09
SSU72-204ENST00000378726 TMEM18Q96B42 140 aa15.59■□□□□ 0.09
SSU72-204ENST00000378726 TPSG1Q9NRR2 321 aa15.59■□□□□ 0.09
SSU72-204ENST00000378726 HILPDAQ9Y5L2 63 aa15.59■□□□□ 0.09
SSU72-204ENST00000378726 CNTFRP26992 372 aa15.58■□□□□ 0.08
SSU72-204ENST00000378726 CNN1P51911 297 aaKnown RBP15.58■□□□□ 0.08
SSU72-204ENST00000378726 A0A1W2PPI3 338 aa15.58■□□□□ 0.08
SSU72-204ENST00000378726 A0A1W2PPV4 95 aa15.58■□□□□ 0.08
SSU72-204ENST00000378726 ODF3BA8MYP8 253 aa15.58■□□□□ 0.08
SSU72-204ENST00000378726 CEACAM3P40198 252 aa15.58■□□□□ 0.08
SSU72-204ENST00000378726 TREML4Q6UXN2 200 aa15.58■□□□□ 0.08
SSU72-204ENST00000378726 TMEM144Q7Z5S9 345 aa15.58■□□□□ 0.08
SSU72-204ENST00000378726 LHFPL4Q7Z7J7 247 aa15.58■□□□□ 0.08
SSU72-204ENST00000378726 MRPL41Q8IXM3 137 aaKnown RBP15.58■□□□□ 0.08
SSU72-204ENST00000378726 KCNIP2Q9NS61 270 aa15.58■□□□□ 0.08
SSU72-204ENST00000378726 A0A1B0GUS0 222 aa15.57■□□□□ 0.08
SSU72-204ENST00000378726 ERHP84090 104 aaKnown RBP15.57■□□□□ 0.08
SSU72-204ENST00000378726 MRGPRG-AS1Q2M3A8 158 aa15.57■□□□□ 0.08
SSU72-204ENST00000378726 GBGT1Q8N5D6 347 aa15.57■□□□□ 0.08
SSU72-204ENST00000378726 NPVFQ9HCQ7 196 aa15.57■□□□□ 0.08
SSU72-204ENST00000378726 TRAPPC1Q9Y5R8 145 aa15.57■□□□□ 0.08
SSU72-204ENST00000378726 IGHV2-70DA0A0C4DH43 119 aa15.56■□□□□ 0.08
SSU72-204ENST00000378726 TIMM23O14925 209 aa15.56■□□□□ 0.08
SSU72-204ENST00000378726 ATP5IP56385 69 aaPredicted RBP15.56■□□□□ 0.08
SSU72-204ENST00000378726 PSG5Q15238 335 aa15.56■□□□□ 0.08
SSU72-204ENST00000378726 C10orf55Q5SWW7 151 aa15.56■□□□□ 0.08
SSU72-204ENST00000378726 UTP20O75691 2785 aaKnown RBP15.56■□□□□ 0.08
SSU72-204ENST00000378726 CGB1A6NKQ9 187 aa15.56■□□□□ 0.08
SSU72-204ENST00000378726 CRYGBP07316 175 aa15.56■□□□□ 0.08
SSU72-204ENST00000378726 CD99P14209 185 aa15.56■□□□□ 0.08
SSU72-204ENST00000378726 TMEM249Q2WGJ8 235 aa15.56■□□□□ 0.08
SSU72-204ENST00000378726 C2orf83Q53S99 150 aa15.56■□□□□ 0.08
SSU72-204ENST00000378726 FAM168AQ92567 244 aa15.56■□□□□ 0.08
SSU72-204ENST00000378726 SIRPDQ9H106 197 aa15.56■□□□□ 0.08
SSU72-204ENST00000378726 TRBV20OR9-2A0A075B6H5 130 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 A0A1W2PN81 502 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 MPDU1O75352 247 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 ARL14EPLP0DKL9 152 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 RNASE2P10153 161 aaKnown RBP15.55■□□□□ 0.08
SSU72-204ENST00000378726 ATP5J2P56134 94 aa15.55■□□□□ 0.08
SSU72-204ENST00000378726 ARSJQ5FYB0 599 aaPredicted RBP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms