RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 TENM2Q9NT68 2774 aa12.75□□□□□ -0.37
RER1-202ENST00000378512 STARD9Q9P2P6 4700 aa12.75□□□□□ -0.37
RER1-202ENST00000378512 IGHV3-48P01763 117 aa12.75□□□□□ -0.37
RER1-202ENST00000378512 CD7P09564 240 aa12.75□□□□□ -0.37
RER1-202ENST00000378512 TMED4Q7Z7H5 227 aa12.75□□□□□ -0.37
RER1-202ENST00000378512 TMEM170AQ8WVE7 144 aa12.75□□□□□ -0.37
RER1-202ENST00000378512 NEURL2Q9BR09 285 aa12.75□□□□□ -0.37
RER1-202ENST00000378512 ENY2Q9NPA8 101 aa12.75□□□□□ -0.37
RER1-202ENST00000378512 GNG7O60262 68 aa12.74□□□□□ -0.37
RER1-202ENST00000378512 PITX3O75364 302 aa12.74□□□□□ -0.37
RER1-202ENST00000378512 TMEM50AO95807 157 aa12.74□□□□□ -0.37
RER1-202ENST00000378512 BTCP35070 178 aa12.74□□□□□ -0.37
RER1-202ENST00000378512 NPBWR1P48145 328 aa12.74□□□□□ -0.37
RER1-202ENST00000378512 CD81P60033 236 aa12.74□□□□□ -0.37
RER1-202ENST00000378512 UBE2MP61081 183 aaKnown RBP12.74□□□□□ -0.37
RER1-202ENST00000378512 TNFRSF9Q07011 255 aa12.74□□□□□ -0.37
RER1-202ENST00000378512 SMCO1Q147U7 214 aa12.74□□□□□ -0.37
RER1-202ENST00000378512 ANKRD55Q3KP44 614 aa12.74□□□□□ -0.37
RER1-202ENST00000378512 LINC00299Q6ZSB3 139 aa12.74□□□□□ -0.37
RER1-202ENST00000378512 DUSP18Q8NEJ0 188 aa12.74□□□□□ -0.37
RER1-202ENST00000378512 MRPL36Q9P0J6 103 aaKnown RBP12.74□□□□□ -0.37
RER1-202ENST00000378512 A0A1B0GU03 582 aa12.73□□□□□ -0.37
RER1-202ENST00000378512 NDUFB6O95139 128 aa12.73□□□□□ -0.37
RER1-202ENST00000378512 SFT2D2O95562 160 aa12.73□□□□□ -0.37
RER1-202ENST00000378512 SLC25A6P12236 298 aa12.73□□□□□ -0.37
RER1-202ENST00000378512 IL7P13232 177 aa12.73□□□□□ -0.37
RER1-202ENST00000378512 PPP1R1AQ13522 171 aa12.73□□□□□ -0.37
RER1-202ENST00000378512 TRIQKQ629K1 86 aa12.73□□□□□ -0.37
RER1-202ENST00000378512 CENPSQ8N2Z9 138 aa12.73□□□□□ -0.37
RER1-202ENST00000378512 OR4X1Q8NH49 305 aa12.73□□□□□ -0.37
RER1-202ENST00000378512 C7orf50Q9BRJ6 194 aaKnown RBP12.73□□□□□ -0.37
RER1-202ENST00000378512 HEYLQ9NQ87 328 aaPredicted RBP12.73□□□□□ -0.37
RER1-202ENST00000378512 LYSTQ99698 3801 aa12.73□□□□□ -0.37
RER1-202ENST00000378512 TSPAN4O14817 238 aa12.72□□□□□ -0.37
RER1-202ENST00000378512 MLANAQ16655 118 aa12.72□□□□□ -0.37
RER1-202ENST00000378512 SLC24A4Q8NFF2 622 aa12.72□□□□□ -0.37
RER1-202ENST00000378512 RNASEH2CQ8TDP1 164 aaKnown RBP12.72□□□□□ -0.37
RER1-202ENST00000378512 ZFAND3Q9H8U3 227 aa12.72□□□□□ -0.37
RER1-202ENST00000378512 SMPXQ9UHP9 88 aa12.72□□□□□ -0.37
RER1-202ENST00000378512 CEBPZOSA8MTT3 80 aa12.71□□□□□ -0.37
RER1-202ENST00000378512 CLN5O75503 358 aa12.71□□□□□ -0.37
RER1-202ENST00000378512 OPRK1P41145 380 aa12.71□□□□□ -0.37
RER1-202ENST00000378512 GUCA2BQ16661 112 aa12.71□□□□□ -0.37
RER1-202ENST00000378512 TMEM116Q8NCL8 245 aa12.71□□□□□ -0.37
RER1-202ENST00000378512 SPAG8Q99932 426 aaPredicted RBP12.71□□□□□ -0.37
RER1-202ENST00000378512 C20orf24Q9BUV8 137 aa12.71□□□□□ -0.37
RER1-202ENST00000378512 ZMAT4Q9H898 229 aa12.71□□□□□ -0.37
RER1-202ENST00000378512 SELENOKQ9Y6D0 94 aa12.71□□□□□ -0.37
RER1-202ENST00000378512 IGHV3OR16-8A0A075B7F1 116 aa12.71□□□□□ -0.38
RER1-202ENST00000378512 IGHV7-4-1A0A0J9YVY3 117 aa12.71□□□□□ -0.38
RER1-202ENST00000378512 OR11H12B2RN74 326 aa12.71□□□□□ -0.38
RER1-202ENST00000378512 CHEK1O14757 476 aa12.71□□□□□ -0.38
RER1-202ENST00000378512 SCAF4O95104 1147 aaKnown RBP12.71□□□□□ -0.38
RER1-202ENST00000378512 VAMP1P23763 118 aa12.71□□□□□ -0.38
RER1-202ENST00000378512 HAGHQ16775 308 aa12.71□□□□□ -0.38
RER1-202ENST00000378512 ZFAND6Q6FIF0 208 aa12.71□□□□□ -0.38
RER1-202ENST00000378512 TOMM20LQ6UXN7 152 aa12.71□□□□□ -0.38
RER1-202ENST00000378512 ZNF600Q6ZNG1 722 aa12.71□□□□□ -0.38
RER1-202ENST00000378512 HIPK2Q9H2X6 1198 aa12.71□□□□□ -0.38
RER1-202ENST00000378512 TMED3Q9Y3Q3 217 aa12.71□□□□□ -0.38
RER1-202ENST00000378512 U3KQ87 197 aa12.71□□□□□ -0.38
RER1-202ENST00000378512 A6NHS1 94 aa12.7□□□□□ -0.38
RER1-202ENST00000378512 FAM90A26D6RGX4 464 aa12.7□□□□□ -0.38
RER1-202ENST00000378512 PLA2G10O15496 165 aa12.7□□□□□ -0.38
RER1-202ENST00000378512 IGKV1-17P01599 117 aa12.7□□□□□ -0.38
RER1-202ENST00000378512 NPY1RP25929 384 aa12.7□□□□□ -0.38
RER1-202ENST00000378512 INPP1P49441 399 aa12.7□□□□□ -0.38
RER1-202ENST00000378512 ATP5IP56385 69 aaPredicted RBP12.7□□□□□ -0.38
RER1-202ENST00000378512 FAM90A2PQ658T7 463 aa12.7□□□□□ -0.38
RER1-202ENST00000378512 PRSS54Q6PEW0 395 aa12.7□□□□□ -0.38
RER1-202ENST00000378512 RBPMS2Q6ZRY4 209 aaKnown RBP12.7□□□□□ -0.38
RER1-202ENST00000378512 SLC16A13Q7RTY0 426 aa12.7□□□□□ -0.38
RER1-202ENST00000378512 DEFB125Q8N687 156 aa12.7□□□□□ -0.38
RER1-202ENST00000378512 DTD1Q8TEA8 209 aa12.7□□□□□ -0.38
RER1-202ENST00000378512 WFDC10AQ9H1F0 79 aa12.7□□□□□ -0.38
RER1-202ENST00000378512 RBKSQ9H477 322 aa12.7□□□□□ -0.38
RER1-202ENST00000378512 TRAV14DV4A0A0A6YYC5 116 aa12.69□□□□□ -0.38
RER1-202ENST00000378512 RPS10-NUDT3A0A1W2PQS6 291 aa12.69□□□□□ -0.38
RER1-202ENST00000378512 C9orf170A2RU37 121 aa12.69□□□□□ -0.38
RER1-202ENST00000378512 RBMY1BA6NDE4 496 aaKnown RBP12.69□□□□□ -0.38
RER1-202ENST00000378512 RBMY1EA6NEQ0 496 aaKnown RBP12.69□□□□□ -0.38
RER1-202ENST00000378512 ZNF207O43670 478 aaKnown RBP12.69□□□□□ -0.38
RER1-202ENST00000378512 NXPH3O95157 252 aa12.69□□□□□ -0.38
RER1-202ENST00000378512 RBMY1DP0C7P1 496 aaKnown RBP12.69□□□□□ -0.38
RER1-202ENST00000378512 SLC25A4P12235 298 aa12.69□□□□□ -0.38
RER1-202ENST00000378512 NOXA1Q86UR1 476 aa12.69□□□□□ -0.38
RER1-202ENST00000378512 OR52B4Q8NGK2 314 aa12.69□□□□□ -0.38
RER1-202ENST00000378512 CITED4Q96RK1 184 aa12.69□□□□□ -0.38
RER1-202ENST00000378512 FAM110AQ9BQ89 295 aa12.69□□□□□ -0.38
RER1-202ENST00000378512 RHPN1-AS1Q9BWJ2 59 aa12.69□□□□□ -0.38
RER1-202ENST00000378512 VSIRQ9H7M9 311 aa12.69□□□□□ -0.38
RER1-202ENST00000378512 TUBA4BQ9H853 241 aa12.69□□□□□ -0.38
RER1-202ENST00000378512 PUS1Q9Y606 427 aaKnown RBP eCLIP12.69□□□□□ -0.38
RER1-202ENST00000378512 TRAV30A0A087WSZ9 112 aa12.68□□□□□ -0.38
RER1-202ENST00000378512 CENPXA8MT69 81 aa12.68□□□□□ -0.38
RER1-202ENST00000378512 IGLC1P0CG04 106 aa12.68□□□□□ -0.38
RER1-202ENST00000378512 LYL1P12980 280 aa12.68□□□□□ -0.38
RER1-202ENST00000378512 CNPY1Q3B7I2 92 aa12.68□□□□□ -0.38
RER1-202ENST00000378512 LAMTOR1Q6IAA8 161 aa12.68□□□□□ -0.38
RER1-202ENST00000378512 RNF2Q99496 336 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms