RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 SRPXP78539 464 aa8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 TRIQKQ629K1 86 aa8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 LGI3Q8N145 548 aa8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 TMEM116Q8NCL8 245 aa8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 OR52E5Q8NH55 327 aa8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 IL22RA2Q969J5 263 aa8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 GALNT14Q96FL9 552 aa8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 TRAV14DV4A0A0A6YYC5 116 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 IGHV7-4-1A0A0J9YVY3 117 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 LINC00854A0A1B0GVQ3 168 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 RPS10-NUDT3A0A1W2PQS6 291 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 RBMY1BA6NDE4 496 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 RBMY1EA6NEQ0 496 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 K7EMT4 169 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 RBMY1DP0C7P1 496 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 TFPI2P48307 235 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 SUPT4H1P63272 117 aaKnown RBP8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 SMCO1Q147U7 214 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 MLANAQ16655 118 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 LYZL2Q7Z4W2 148 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 SLC24A4Q8NFF2 622 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 OR1S1Q8NH92 325 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 SPAG8Q99932 426 aaPredicted RBP8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 FAM110AQ9BQ89 295 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 GINS3Q9BRX5 216 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 RHPN1-AS1Q9BWJ2 59 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 SRRQ9GZT4 340 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 HIPK2Q9H2X6 1198 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 PLA2G2EQ9NZK7 142 aa8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 PUS1Q9Y606 427 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMARCE1-203ENST00000377808 A0A0B4J2A0 478 aa8.66□□□□□ -1.02
SMARCE1-203ENST00000377808 IGHV3-66A0A0C4DH42 116 aa8.66□□□□□ -1.02
SMARCE1-203ENST00000377808 TSPAN4O14817 238 aa8.66□□□□□ -1.02
SMARCE1-203ENST00000377808 IFNA10P01566 189 aa8.66□□□□□ -1.02
SMARCE1-203ENST00000377808 BMI1P35226 326 aa8.66□□□□□ -1.02
SMARCE1-203ENST00000377808 CCR6P51684 374 aa8.66□□□□□ -1.02
SMARCE1-203ENST00000377808 TOMM20LQ6UXN7 152 aa8.66□□□□□ -1.02
SMARCE1-203ENST00000377808 ZNF600Q6ZNG1 722 aa8.66□□□□□ -1.02
SMARCE1-203ENST00000377808 RNF2Q99496 336 aa8.66□□□□□ -1.02
SMARCE1-203ENST00000377808 SLC25A21Q9BQT8 299 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1-203ENST00000377808 FNDC4Q9H6D8 234 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1-203ENST00000377808 SHPKQ9UHJ6 478 aa8.66□□□□□ -1.02
SMARCE1-203ENST00000377808 SMPXQ9UHP9 88 aa8.66□□□□□ -1.02
SMARCE1-203ENST00000377808 OR4C46A6NHA9 309 aa8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 CHEK1O14757 476 aa8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 CLN5O75503 358 aa8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 TMEM50AO95807 157 aa8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 NPY1RP25929 384 aa8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 RPL11P62913 178 aaKnown RBP8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 AARDQ4LEZ3 155 aa8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 TMEM128Q5BJH2 165 aa8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 CENPSQ8N2Z9 138 aa8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 MUC7Q8TAX7 377 aa8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 DTD1Q8TEA8 209 aa8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 OR10C1Q96KK4 312 aa8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 GGTLC1Q9BX51 225 aa8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 RBKSQ9H477 322 aa8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 MRPL36Q9P0J6 103 aaKnown RBP8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 CACFD1Q9UGQ2 172 aa8.65□□□□□ -1.02
SMARCE1-203ENST00000377808 KMT2CQ8NEZ4 4911 aaKnown RBP8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 LOC102724200A0A096LPH7 203 aaPredicted RBP8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 PIGBOS1A0A0B4J2F0 54 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 C3orf84H3BNL1 204 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 RND2P52198 227 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 TNFRSF9Q07011 255 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 PPP1R1AQ13522 171 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 RBMS2Q15434 407 aaKnown RBP8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 BAK1Q16611 211 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 BSXQ3C1V8 233 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 TIGITQ495A1 244 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 C2orf83Q53S99 150 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 NMSQ5H8A3 153 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 PVRIGQ6DKI7 326 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 NOXA1Q86UR1 476 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 WFDC3Q8IUB2 231 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 GBGT1Q8N5D6 347 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 OR4X1Q8NH49 305 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 DEDD2Q8WXF8 326 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 ST8SIA2Q92186 375 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 CITED4Q96RK1 184 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 PAIP2BQ9ULR5 123 aaKnown RBP8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 DNAH7Q8WXX0 4024 aa8.64□□□□□ -1.03
SMARCE1-203ENST00000377808 TRAV30A0A087WSZ9 112 aa8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 A0A1B0GU03 582 aa8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 CENPXA8MT69 81 aa8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 SFT2D2O95562 160 aa8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 APOHP02749 345 aaPredicted RBP8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 IFNA4P05014 189 aa8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 LYL1P12980 280 aa8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 ZFAND6Q6FIF0 208 aa8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 ETFRF1Q6IPR1 90 aa8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 LINC00322Q6ZN03 302 aaPredicted RBP8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 TCF24Q7RTU0 167 aa8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 RNASEH2CQ8TDP1 164 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 ACY3Q96HD9 319 aa8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 NARS2Q96I59 477 aaKnown RBP8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 ZNF414Q96IQ9 312 aa8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 METTL26Q96S19 204 aa8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 ZFAND3Q9H8U3 227 aa8.63□□□□□ -1.03
SMARCE1-203ENST00000377808 NDUFA13Q9P0J0 144 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms