RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 C4orf17Q53FE4 359 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 LEMD1Q68G75 181 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 FAM180AQ6UWF9 173 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 GBGT1Q8N5D6 347 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 OR2T10Q8NGZ9 312 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 OR9G1Q8NH87 305 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 RNASE6Q93091 150 aaKnown RBP7.72□□□□□ -1.17
TRIM39-202ENST00000376659 TMEM106BQ9NUM4 274 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 K7ENP7 123 aa7.71□□□□□ -1.17
TRIM39-202ENST00000376659 DVL1O14640 695 aa7.71□□□□□ -1.17
TRIM39-202ENST00000376659 FBXL19-AS1Q494R0 122 aa7.71□□□□□ -1.17
TRIM39-202ENST00000376659 PDPNQ86YL7 162 aa7.71□□□□□ -1.17
TRIM39-202ENST00000376659 C8orf46Q8TAG6 207 aa7.71□□□□□ -1.17
TRIM39-202ENST00000376659 EAF1Q96JC9 268 aaPredicted RBP7.71□□□□□ -1.17
TRIM39-202ENST00000376659 ROS1P08922 2347 aa7.71□□□□□ -1.18
TRIM39-202ENST00000376659 TRAV9-1A0A075B6T8 112 aa7.71□□□□□ -1.18
TRIM39-202ENST00000376659 C22orf46C9J442 243 aa7.71□□□□□ -1.18
TRIM39-202ENST00000376659 RHOBP62745 196 aa7.71□□□□□ -1.18
TRIM39-202ENST00000376659 RPL31P62899 125 aaKnown RBP7.71□□□□□ -1.18
TRIM39-202ENST00000376659 LDLRAD2Q5SZI1 272 aa7.71□□□□□ -1.18
TRIM39-202ENST00000376659 ASCL5Q7RTU5 278 aa7.71□□□□□ -1.18
TRIM39-202ENST00000376659 MBD6Q96DN6 1003 aa7.71□□□□□ -1.18
TRIM39-202ENST00000376659 NAV3Q8IVL0 2385 aa7.71□□□□□ -1.18
TRIM39-202ENST00000376659 PTTG1IPP53801 180 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 FBLN7Q53RD9 439 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 ZNF705AQ6ZN79 300 aaPredicted RBP7.7□□□□□ -1.18
TRIM39-202ENST00000376659 SSX8Q7RTT4 187 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 SPACA3Q8IXA5 215 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 DEFB108BQ8NET1 73 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 RND1Q92730 232 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 TNFRSF14Q92956 283 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 SLC25A33Q9BSK2 321 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 GSX1Q9H4S2 264 aaPredicted RBP7.7□□□□□ -1.18
TRIM39-202ENST00000376659 AURKAIP1Q9NWT8 199 aaPredicted RBP7.7□□□□□ -1.18
TRIM39-202ENST00000376659 TNCP24821 2201 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 C20orf202A1L168 122 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 IGHV1-8P0DP01 117 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 CDSNQ15517 529 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 A0A1B0GUS0 222 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 A0A1W2PPI3 338 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 TEX22C9J3V5 150 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 GCGP01275 180 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 TNFSF4P23510 183 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 CHRNA7P36544 502 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 RTL8BQ17RB0 113 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 ZNF414Q96IQ9 312 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 ZNF430Q9H8G1 570 aaPredicted RBP7.7□□□□□ -1.18
TRIM39-202ENST00000376659 PLEKHA3Q9HB20 300 aa7.7□□□□□ -1.18
TRIM39-202ENST00000376659 NKX6-3A6NJ46 265 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 RBMXL2O75526 392 aaKnown RBP7.69□□□□□ -1.18
TRIM39-202ENST00000376659 TNFRSF1AP19438 455 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 GATA2P23769 480 aaPredicted RBP7.69□□□□□ -1.18
TRIM39-202ENST00000376659 CHRNB4P30926 498 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 ADMP35318 185 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 FAM78BQ5VT40 261 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 CACNG8Q8WXS5 425 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 C19orf24Q9BVV8 132 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 IL36BQ9NZH7 164 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 POLEQ07864 2286 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 PPIAL4EA0A075B759 164 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 PPIAL4DF5H284 164 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 DLL1O00548 723 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 PPIAL4FP0DN26 164 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 COMPP49747 757 aaPredicted RBP7.69□□□□□ -1.18
TRIM39-202ENST00000376659 C10orf55Q5SWW7 151 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 LY6G5BQ8NDX9 201 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 OR2T6Q8NHC8 308 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 SAP30LQ9HAJ7 183 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 FKBP11Q9NYL4 201 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 PPIAL4AQ9Y536 164 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 A0A0U1RQK1 487 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 ZNF320A2RRD8 509 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 USF1P22415 310 aaPredicted RBP7.69□□□□□ -1.18
TRIM39-202ENST00000376659 FXYD5Q96DB9 178 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 PSMG3-AS1Q96PY0 264 aa7.69□□□□□ -1.18
TRIM39-202ENST00000376659 RIF1Q5UIP0 2472 aaKnown RBP7.68□□□□□ -1.18
TRIM39-202ENST00000376659 A0A1W2PPV4 95 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 SMIM27A0A1W2PRY6 76 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 XKRY2A2RUG3 117 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 HOXB4P17483 251 aaPredicted RBP7.68□□□□□ -1.18
TRIM39-202ENST00000376659 RPL8P62917 257 aaKnown RBP7.68□□□□□ -1.18
TRIM39-202ENST00000376659 WFDC8Q8IUA0 241 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 OR4P4Q8NGL7 312 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 TMEM186Q96B77 213 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 HARBI1Q96MB7 349 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 AKAP9Q99996 3911 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 PPP5D1E7EU14 171 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 RBP4P02753 201 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 Q8N976 141 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 OR4C13Q8NGP0 309 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 MRPL32Q9BYC8 188 aaKnown RBP7.68□□□□□ -1.18
TRIM39-202ENST00000376659 A0A1W2PRE2 83 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 OR10J1P30954 320 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 ZNF329Q86UD4 541 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 LPAR2Q9HBW0 351 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 RNF114Q9Y508 228 aa7.68□□□□□ -1.18
TRIM39-202ENST00000376659 PLAUP00749 431 aa7.67□□□□□ -1.18
TRIM39-202ENST00000376659 CNTFRP26992 372 aa7.67□□□□□ -1.18
TRIM39-202ENST00000376659 PPOXP50336 477 aa7.67□□□□□ -1.18
TRIM39-202ENST00000376659 CST9LP1Q5W188 147 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms