RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 UBE2DNLQ8IWF7 75 aa10.56□□□□□ -0.72
VPS13A-204ENST00000376634 TMEM187Q14656 261 aa10.56□□□□□ -0.72
VPS13A-204ENST00000376634 RTN4RL2Q86UN3 420 aa10.56□□□□□ -0.72
VPS13A-204ENST00000376634 IL36BQ9NZH7 164 aa10.56□□□□□ -0.72
VPS13A-204ENST00000376634 OSR1Q8TAX0 266 aaPredicted RBP10.56□□□□□ -0.72
VPS13A-204ENST00000376634 SSC4DQ8WTU2 575 aa10.56□□□□□ -0.72
VPS13A-204ENST00000376634 MRPL20Q9BYC9 149 aaKnown RBP10.56□□□□□ -0.72
VPS13A-204ENST00000376634 GSN-AS1Q9NRJ2 163 aa10.56□□□□□ -0.72
VPS13A-204ENST00000376634 ASPHD2Q6ICH7 369 aa10.56□□□□□ -0.72
VPS13A-204ENST00000376634 LINC00614P0C842 121 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 JMJD8Q96S16 334 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 ASCL2Q99929 193 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 CGAP01215 116 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 H2BFSP57053 126 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 ZIC4Q8N9L1 334 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 NPDC1Q9NQX5 325 aaPredicted RBP10.55□□□□□ -0.72
VPS13A-204ENST00000376634 LOC390937A0A1W2PQ73 354 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 ST20Q9HBF5 79 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 TRAV9-1A0A075B6T8 112 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 PCOLCEQ15113 449 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 S4R3C0 116 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 TECTAO75443 2155 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 A0A1W2PQF6 199 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.55□□□□□ -0.72
VPS13A-204ENST00000376634 ZNF257Q9Y2Q1 563 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 MUC21A0A0G2JKD1 596 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 MUC21A0A140T8X8 626 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 ZNHIT1O43257 154 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 MUC21Q5SSG8 566 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 C1orf100Q5SVJ3 147 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 H3BUT2 72 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 J3QW42 95 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 CDCP2Q5VXM1 449 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 CLEC19AQ6UXS0 136 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 DPM3Q9P2X0 92 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 GFRA3O60609 400 aa10.55□□□□□ -0.72
VPS13A-204ENST00000376634 LGALS1P09382 135 aaKnown RBP10.55□□□□□ -0.72
VPS13A-204ENST00000376634 SIRT4Q9Y6E7 314 aaPredicted RBP10.55□□□□□ -0.72
VPS13A-204ENST00000376634 SCO2A0A1W2PP80 73 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 ATXN8Q156A1 80 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 OR52E5Q8NH55 327 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 TRBV5-7A0A0A0MS05 114 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 C8orf82Q6P1X6 216 aaPredicted RBP10.54□□□□□ -0.72
VPS13A-204ENST00000376634 LINC01560Q8TB33 94 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 FOXL2P58012 376 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 TIMM23BQ5SRD1 257 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 C19orf48Q6RUI8 117 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 GDF15Q99988 308 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 UCP3P55916 312 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 NHP2Q9NX24 153 aaKnown RBP10.54□□□□□ -0.72
VPS13A-204ENST00000376634 IZUMO1RA6ND01 250 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 GAGE2EQ4V326 116 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 POC1AQ8NBT0 407 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 GAGE2DQ9UEU5 116 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 DPM2O94777 84 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 ORAOV1Q8WV07 137 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 VKORC1Q9BQB6 163 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 PPP1R3EQ9H7J1 279 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 FAM19A2Q8N3H0 131 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 OR9G4Q8NGQ1 327 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 PILRBQ9UKJ0 227 aa10.54□□□□□ -0.72
VPS13A-204ENST00000376634 IGKV1D-42A0A075B6H8 117 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 CD28P10747 220 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 TFF3Q07654 80 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 CACNG8Q8WXS5 425 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 NPIPB13A6NJU9 1138 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 M0R2P5 195 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 HLA-DQB1P01920 261 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 SFTA2Q6UW10 78 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 IFI27L2Q9H2X8 130 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 IGLV1-36A0A0B4J1U3 117 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 TRGV4A0A0C4DH28 118 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 TMEM54Q969K7 222 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 HOXD3P31249 432 aaPredicted RBP10.53□□□□□ -0.72
VPS13A-204ENST00000376634 GLRXP35754 106 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 NEU4Q8WWR8 484 aaPredicted RBP10.53□□□□□ -0.72
VPS13A-204ENST00000376634 NHLRC3Q5JS37 347 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 ZNF703Q9H7S9 590 aaPredicted RBP10.53□□□□□ -0.72
VPS13A-204ENST00000376634 A8MWV9 139 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 TDGF1P3P51864 188 aa10.53□□□□□ -0.72
VPS13A-204ENST00000376634 COQ2Q96H96 371 aa10.52□□□□□ -0.72
VPS13A-204ENST00000376634 SRSF1Q07955 248 aaKnown RBP eCLIP10.52□□□□□ -0.72
VPS13A-204ENST00000376634 ERVH48-1M5A8F1 160 aa10.52□□□□□ -0.73
VPS13A-204ENST00000376634 COX11Q9Y6N1 276 aa10.52□□□□□ -0.73
VPS13A-204ENST00000376634 A0A087WWC5 75 aa10.52□□□□□ -0.73
VPS13A-204ENST00000376634 ADAMTS7Q9UKP4 1686 aa10.52□□□□□ -0.73
VPS13A-204ENST00000376634 WDYHV1Q96HA8 205 aa10.52□□□□□ -0.73
VPS13A-204ENST00000376634 TRAV8-1A0A0A6YYK1 113 aa10.52□□□□□ -0.73
VPS13A-204ENST00000376634 MSGN1A6NI15 193 aa10.52□□□□□ -0.73
VPS13A-204ENST00000376634 IGFBP2P18065 325 aa10.52□□□□□ -0.73
VPS13A-204ENST00000376634 FBLN7Q53RD9 439 aa10.52□□□□□ -0.73
VPS13A-204ENST00000376634 GLMPQ8WWB7 406 aa10.52□□□□□ -0.73
VPS13A-204ENST00000376634 ZFYVE26Q68DK2 2539 aa10.52□□□□□ -0.73
VPS13A-204ENST00000376634 KBTBD11-OT1A0A1B0GTJ5 212 aa10.52□□□□□ -0.73
VPS13A-204ENST00000376634 ZNF415Q09FC8 603 aa10.52□□□□□ -0.73
VPS13A-204ENST00000376634 FBXL15Q9H469 300 aa10.52□□□□□ -0.73
VPS13A-204ENST00000376634 THSD7AQ9UPZ6 1657 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 TCRBV4S1A1TA0A5B7 111 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 ORMDL2Q53FV1 153 aa10.51□□□□□ -0.73
VPS13A-204ENST00000376634 EDA2RQ9HAV5 297 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms