RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 SCRT1Q9BWW7 348 aa16.74■□□□□ 0.27
HLA-C-201ENST00000376228 F11RQ9Y624 299 aaKnown RBP16.74■□□□□ 0.27
HLA-C-201ENST00000376228 CNIH1O95406 144 aa16.73■□□□□ 0.27
HLA-C-201ENST00000376228 CRYGCP07315 174 aa16.73■□□□□ 0.27
HLA-C-201ENST00000376228 AREGP15514 252 aa16.73■□□□□ 0.27
HLA-C-201ENST00000376228 M6PRP20645 277 aa16.73■□□□□ 0.27
HLA-C-201ENST00000376228 AKR1C1Q04828 323 aa16.73■□□□□ 0.27
HLA-C-201ENST00000376228 FXYD3Q14802 87 aa16.73■□□□□ 0.27
HLA-C-201ENST00000376228 ACOT6Q3I5F7 207 aaPredicted RBP16.73■□□□□ 0.27
HLA-C-201ENST00000376228 ETFRF1Q6IPR1 90 aa16.73■□□□□ 0.27
HLA-C-201ENST00000376228 SLC16A13Q7RTY0 426 aa16.73■□□□□ 0.27
HLA-C-201ENST00000376228 RPP25LQ8N5L8 163 aaKnown RBP16.73■□□□□ 0.27
HLA-C-201ENST00000376228 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.73■□□□□ 0.27
HLA-C-201ENST00000376228 Q8N9W7 124 aa16.73■□□□□ 0.27
HLA-C-201ENST00000376228 RCC1LQ96I51 464 aaKnown RBP16.73■□□□□ 0.27
HLA-C-201ENST00000376228 DUX5Q96PT3 197 aa16.73■□□□□ 0.27
HLA-C-201ENST00000376228 MDFIC2A0A1B0GVS7 189 aa16.72■□□□□ 0.27
HLA-C-201ENST00000376228 AGPAT2O15120 278 aa16.72■□□□□ 0.27
HLA-C-201ENST00000376228 HLA-DRB1P01911 266 aa16.72■□□□□ 0.27
HLA-C-201ENST00000376228 PMS2P11Q13670 270 aa16.72■□□□□ 0.27
HLA-C-201ENST00000376228 ZNF726P1Q15940 193 aa16.72■□□□□ 0.27
HLA-C-201ENST00000376228 OR1L6Q8NGR2 347 aa16.72■□□□□ 0.27
HLA-C-201ENST00000376228 SLC35E1Q96K37 410 aa16.72■□□□□ 0.27
HLA-C-201ENST00000376228 SMDT1Q9H4I9 107 aa16.72■□□□□ 0.27
HLA-C-201ENST00000376228 NCBP2LA6PVI3 153 aaKnown RBP16.71■□□□□ 0.27
HLA-C-201ENST00000376228 CTRB1P17538 263 aa16.71■□□□□ 0.27
HLA-C-201ENST00000376228 ELLP55199 621 aaPredicted RBP16.71■□□□□ 0.27
HLA-C-201ENST00000376228 CX3CL1P78423 397 aa16.71■□□□□ 0.27
HLA-C-201ENST00000376228 CTRB2Q6GPI1 263 aa16.71■□□□□ 0.27
HLA-C-201ENST00000376228 BPIFCQ8NFQ6 507 aa16.71■□□□□ 0.27
HLA-C-201ENST00000376228 OR10G4Q8NGN3 311 aa16.71■□□□□ 0.27
HLA-C-201ENST00000376228 OR10G9Q8NGN4 311 aa16.71■□□□□ 0.27
HLA-C-201ENST00000376228 OR10G7Q8NGN6 311 aa16.71■□□□□ 0.27
HLA-C-201ENST00000376228 SPATA3Q8NHX4 192 aa16.71■□□□□ 0.27
HLA-C-201ENST00000376228 SFT2D1Q8WV19 159 aa16.71■□□□□ 0.27
HLA-C-201ENST00000376228 FNDC4Q9H6D8 234 aaPredicted RBP16.71■□□□□ 0.27
HLA-C-201ENST00000376228 CTXND1A0A1B0GTU2 59 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 SEC14L6B5MCN3 397 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 CYB5BO43169 146 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 MFAP2P55001 183 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 PRR20EP86478 221 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 PRR20CP86479 221 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 PRR20DP86480 221 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 PRR20BP86481 221 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 PRR20AP86496 221 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 RBMS3Q6XE24 437 aaKnown RBP16.7■□□□□ 0.26
HLA-C-201ENST00000376228 SSMEM1Q8WWF3 244 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 LINC00052Q96N35 136 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 PBDC1Q9BVG4 233 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 ACTR3CQ9C0K3 210 aaPredicted RBP16.7■□□□□ 0.26
HLA-C-201ENST00000376228 SLC45A2Q9UMX9 530 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 PXMP4Q9Y6I8 212 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 TMEM218A2RU14 115 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 REG1AP05451 166 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 MLANAQ16655 118 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 GUK1Q16774 197 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 THAP8Q8NA92 274 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 ARPC1AQ92747 370 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 JMJD8Q96S16 334 aa16.7■□□□□ 0.26
HLA-C-201ENST00000376228 IGKV1OR2-108A0A075B7D4 117 aa16.69■□□□□ 0.26
HLA-C-201ENST00000376228 A0A0U1RQK1 487 aa16.69■□□□□ 0.26
HLA-C-201ENST00000376228 NPIPB5A8MRT5 1133 aa16.69■□□□□ 0.26
HLA-C-201ENST00000376228 YIF1AO95070 293 aa16.69■□□□□ 0.26
HLA-C-201ENST00000376228 SRSF3P84103 164 aaKnown RBP16.69■□□□□ 0.26
HLA-C-201ENST00000376228 PEA15Q15121 130 aa16.69■□□□□ 0.26
HLA-C-201ENST00000376228 C9orf139Q6ZV77 190 aa16.69■□□□□ 0.26
HLA-C-201ENST00000376228 PIFOQ8TCI5 191 aa16.69■□□□□ 0.26
HLA-C-201ENST00000376228 SLC39A9Q9NUM3 307 aa16.69■□□□□ 0.26
HLA-C-201ENST00000376228 DNAJC9-AS1A6NH13 148 aa16.68■□□□□ 0.26
HLA-C-201ENST00000376228 FBP1P09467 338 aa16.68■□□□□ 0.26
HLA-C-201ENST00000376228 CCL20P78556 96 aa16.68■□□□□ 0.26
HLA-C-201ENST00000376228 MIC13Q5XKP0 118 aa16.68■□□□□ 0.26
HLA-C-201ENST00000376228 ABHD5Q8WTS1 349 aa16.68■□□□□ 0.26
HLA-C-201ENST00000376228 RBM14Q96PK6 669 aaKnown RBP16.68■□□□□ 0.26
HLA-C-201ENST00000376228 RASL11BQ9BPW5 248 aa16.68■□□□□ 0.26
HLA-C-201ENST00000376228 IGHV7-81A0A0B4J1V7 117 aa16.67■□□□□ 0.26
HLA-C-201ENST00000376228 MAP1LC3B2A6NCE7 125 aa16.67■□□□□ 0.26
HLA-C-201ENST00000376228 LINC00869P0C866 280 aa16.67■□□□□ 0.26
HLA-C-201ENST00000376228 B2MP61769 119 aa16.67■□□□□ 0.26
HLA-C-201ENST00000376228 DEFB112Q30KQ8 113 aa16.67■□□□□ 0.26
HLA-C-201ENST00000376228 C10orf91Q5T1B1 145 aa16.67■□□□□ 0.26
HLA-C-201ENST00000376228 SSX7Q7RTT5 188 aa16.67■□□□□ 0.26
HLA-C-201ENST00000376228 TTC9CQ8N5M4 171 aa16.67■□□□□ 0.26
HLA-C-201ENST00000376228 TMEM116Q8NCL8 245 aa16.67■□□□□ 0.26
HLA-C-201ENST00000376228 MAP1LC3BQ9GZQ8 125 aa16.67■□□□□ 0.26
HLA-C-201ENST00000376228 WNT10AQ9GZT5 417 aa16.67■□□□□ 0.26
HLA-C-201ENST00000376228 TREM1Q9NP99 234 aa16.67■□□□□ 0.26
HLA-C-201ENST00000376228 FAM96BQ9Y3D0 163 aa16.67■□□□□ 0.26
HLA-C-201ENST00000376228 STPG3Q8N7X2 389 aa16.66■□□□□ 0.26
HLA-C-201ENST00000376228 OR2T6Q8NHC8 308 aa16.66■□□□□ 0.26
HLA-C-201ENST00000376228 DMRT1Q9Y5R6 373 aa16.66■□□□□ 0.26
HLA-C-201ENST00000376228 RBFOX3A6NFN3 312 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 CDC34P49427 236 aaPredicted RBP16.65■□□□□ 0.26
HLA-C-201ENST00000376228 NDPQ00604 133 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 KLK9Q2XQG4 91 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 ASPHD1Q5U4P2 390 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 RAB24Q969Q5 203 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 MISP3Q96FF7 219 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 KLK9Q9UKQ9 250 aa16.65■□□□□ 0.26
HLA-C-201ENST00000376228 EGR2P11161 476 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms