RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 C12orf77C9JDV5 145 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 HIST1H2BKO60814 126 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 HIST1H2BJP06899 126 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 HTN3P15516 51 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 RMI2Q96E14 147 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.04□□□□□ -1.6
SCN2A-202ENST00000375427 QRICH2Q9H0J4 1663 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 A0A1B0GTI1 187 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 TIMM17BO60830 172 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 SPRYD7Q5W111 196 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 FOXB1Q99853 325 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 BCL9O00512 1426 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 ABCC6O95255 1503 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 C1QL1O75973 258 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 GZMMP51124 257 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 TGIF1Q15583 401 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 GCSAMQ8N6F7 178 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 FBXO27Q8NI29 283 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 ADGRB3O60242 1522 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 E9PLD3 99 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 IGHV2-70P01814 119 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 SMIM18P0DKX4 95 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 PSG7Q13046 419 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 IL17AQ16552 155 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 Q6ZUT4 128 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 TIMM17AQ99595 171 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 MLST8Q9BVC4 326 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 SCRT1Q9BWW7 348 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 ATRNO75882 1429 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 CCDC168Q8NDH2 2452 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 IGHV3-43A0A0B4J1X8 118 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 IGHV3-43DP0DP04 118 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 RPL18Q07020 188 aaKnown RBP5.03□□□□□ -1.6
SCN2A-202ENST00000375427 LINC01620Q4KN68 170 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 SLIRPQ9GZT3 109 aaKnown RBP5.03□□□□□ -1.6
SCN2A-202ENST00000375427 C22orf46C9J442 243 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 TEX36Q5VZQ5 186 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 A0A1B0GUS0 222 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 H3BNC9 293 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 IGKV3-20P01619 116 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 LIMS1P48059 325 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 BRCA1P38398 1863 aaKnown RBP5.03□□□□□ -1.6
SCN2A-202ENST00000375427 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.03□□□□□ -1.6
SCN2A-202ENST00000375427 RS1O15537 224 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 HIST1H2BOP23527 126 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 HIST1H2BBP33778 126 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 HIST1H2BDP58876 126 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 HIST1H2BCP62807 126 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 HIST2H2BEQ16778 126 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 FAM78AQ5JUQ0 283 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.03□□□□□ -1.6
SCN2A-202ENST00000375427 HIST3H2BBQ8N257 126 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 HIST1H2BHQ93079 126 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 HIST1H2BNQ99877 126 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 HIST1H2BMQ99879 126 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 LAMA4Q16363 1823 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 LCN12Q6JVE5 192 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 TCTN3Q6NUS6 607 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 SDF2Q99470 211 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 USP31Q70CQ4 1352 aa5.03□□□□□ -1.6
SCN2A-202ENST00000375427 LCTP09848 1927 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 TRBV19A0A075B6N1 114 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 IGHV3-21A0A0B4J1V1 117 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 RUNX1Q01196 453 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 LYZL2Q7Z4W2 148 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 RNF152Q8N8N0 203 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 ITLN2Q8WWU7 325 aaPredicted RBP5.02□□□□□ -1.61
SCN2A-202ENST00000375427 DOCK5Q9H7D0 1870 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 TICRRQ7Z2Z1 1910 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 MYO18BQ8IUG5 2567 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 A0A1W2PPV9 198 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 G3V2L1 256 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 IFNL4K9M1U5 179 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 CCL11P51671 97 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 ZP4Q12836 540 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 DCAF12L1Q5VU92 463 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 C1orf159Q96HA4 380 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 PILRBQ9UKJ0 227 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 CEP170Q5SW79 1584 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 YPEL5P62699 121 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 MYEOVQ96EZ4 313 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 R3HDMLQ9H3Y0 253 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 IGHV1OR15-1A0A075B7D0 117 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 A0A0A6YYD5 115 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 A0A0B4J2E0 115 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 A0A0D9SEW6 157 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 A0A1B0GX12 115 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 FABP5P3A8MUU1 101 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 TMEM229AB2RXF0 380 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 C9JQL5 133 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 M0QXV9 152 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 TRBV12-3P01733 135 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 CGB7P0DN87 165 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 XAF1Q6GPH4 301 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 TMEFF1Q8IYR6 380 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 FGFBP2Q9BYJ0 223 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 ESM1Q9NQ30 184 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 MPC1Q9Y5U8 109 aa5.02□□□□□ -1.61
SCN2A-202ENST00000375427 TNRC6BQ9UPQ9 1833 aaKnown RBP5.02□□□□□ -1.61
SCN2A-202ENST00000375427 CRYGCP07315 174 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms