RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 NKX6-3A6NJ46 265 aa17.19■□□□□ 0.34
UPF3A-202ENST00000375299 OR2J3O76001 311 aa17.19■□□□□ 0.34
UPF3A-202ENST00000375299 UBE2V1Q13404 147 aa17.19■□□□□ 0.34
UPF3A-202ENST00000375299 Q6ZVH6 145 aa17.19■□□□□ 0.34
UPF3A-202ENST00000375299 C9orf106Q8NAJ2 232 aa17.19■□□□□ 0.34
UPF3A-202ENST00000375299 ZNF738Q8NE65 137 aa17.19■□□□□ 0.34
UPF3A-202ENST00000375299 ALKBH7Q9BT30 221 aaPredicted RBP17.19■□□□□ 0.34
UPF3A-202ENST00000375299 SRRM4A7MD48 611 aaKnown RBP17.18■□□□□ 0.34
UPF3A-202ENST00000375299 H0YJW9 148 aa17.18■□□□□ 0.34
UPF3A-202ENST00000375299 RPL8P62917 257 aaKnown RBP17.18■□□□□ 0.34
UPF3A-202ENST00000375299 RNASEKQ6P5S7 137 aaKnown RBP17.18■□□□□ 0.34
UPF3A-202ENST00000375299 ZNF714Q96N38 554 aa17.18■□□□□ 0.34
UPF3A-202ENST00000375299 PEX7O00628 323 aa17.18■□□□□ 0.34
UPF3A-202ENST00000375299 LHBP01229 141 aa17.18■□□□□ 0.34
UPF3A-202ENST00000375299 IGHG3P01860 377 aa17.18■□□□□ 0.34
UPF3A-202ENST00000375299 IGKV1-16P04430 117 aa17.18■□□□□ 0.34
UPF3A-202ENST00000375299 ZNF329Q86UD4 541 aa17.18■□□□□ 0.34
UPF3A-202ENST00000375299 CHRDL1Q9BU40 450 aa17.18■□□□□ 0.34
UPF3A-202ENST00000375299 DSCAMO60469 2012 aa17.18■□□□□ 0.34
UPF3A-202ENST00000375299 C2orf70A6NJV1 201 aa17.17■□□□□ 0.34
UPF3A-202ENST00000375299 CT45A6P0DMU7 189 aa17.17■□□□□ 0.34
UPF3A-202ENST00000375299 CT45A5P0DMU8 189 aa17.17■□□□□ 0.34
UPF3A-202ENST00000375299 CT45A7P0DMV0 189 aa17.17■□□□□ 0.34
UPF3A-202ENST00000375299 IGLL1P15814 213 aa17.17■□□□□ 0.34
UPF3A-202ENST00000375299 RNASE8Q8TDE3 154 aaKnown RBP17.17■□□□□ 0.34
UPF3A-202ENST00000375299 TNCP24821 2201 aa17.17■□□□□ 0.34
UPF3A-202ENST00000375299 IGLC7A0M8Q6 106 aa17.17■□□□□ 0.34
UPF3A-202ENST00000375299 PYYP10082 97 aa17.17■□□□□ 0.34
UPF3A-202ENST00000375299 OR4F17Q8NGA8 305 aa17.17■□□□□ 0.34
UPF3A-202ENST00000375299 IGHV1-69-2A0A0G2JMI3 117 aa17.16■□□□□ 0.34
UPF3A-202ENST00000375299 M0R296 226 aa17.16■□□□□ 0.34
UPF3A-202ENST00000375299 DLL1O00548 723 aa17.16■□□□□ 0.34
UPF3A-202ENST00000375299 GPR6P46095 362 aaPredicted RBP17.16■□□□□ 0.34
UPF3A-202ENST00000375299 FAM201AQ5SY85 155 aa17.16■□□□□ 0.34
UPF3A-202ENST00000375299 DUX4L9Q6RFH8 374 aaPredicted RBP17.16■□□□□ 0.34
UPF3A-202ENST00000375299 OR10W1Q8NGF6 305 aa17.16■□□□□ 0.34
UPF3A-202ENST00000375299 PAXXQ9BUH6 204 aa17.16■□□□□ 0.34
UPF3A-202ENST00000375299 SAA1P0DJI8 122 aaPredicted RBP17.16■□□□□ 0.34
UPF3A-202ENST00000375299 MUC15Q8N387 334 aa17.16■□□□□ 0.34
UPF3A-202ENST00000375299 OR2T6Q8NHC8 308 aa17.16■□□□□ 0.34
UPF3A-202ENST00000375299 CACNG8Q8WXS5 425 aa17.16■□□□□ 0.34
UPF3A-202ENST00000375299 SSBP4Q9BWG4 385 aaPredicted RBP17.16■□□□□ 0.34
UPF3A-202ENST00000375299 PRRC2CQ9Y520 2896 aaKnown RBP17.15■□□□□ 0.34
UPF3A-202ENST00000375299 COX7A2P2O60397 106 aa17.15■□□□□ 0.34
UPF3A-202ENST00000375299 PRR27Q6MZM9 219 aa17.15■□□□□ 0.34
UPF3A-202ENST00000375299 HIGD1CA8MV81 97 aa17.15■□□□□ 0.34
UPF3A-202ENST00000375299 HIST1H1EP10412 219 aaKnown RBP17.15■□□□□ 0.34
UPF3A-202ENST00000375299 RBX1P62877 108 aa17.15■□□□□ 0.34
UPF3A-202ENST00000375299 ATP5L2Q7Z4Y8 100 aa17.15■□□□□ 0.34
UPF3A-202ENST00000375299 ITLN1Q8WWA0 313 aa17.15■□□□□ 0.34
UPF3A-202ENST00000375299 URB1O60287 2271 aaKnown RBP17.14■□□□□ 0.33
UPF3A-202ENST00000375299 CAMPP49913 170 aa17.14■□□□□ 0.33
UPF3A-202ENST00000375299 SPATA12Q7Z6I5 190 aa17.14■□□□□ 0.33
UPF3A-202ENST00000375299 GAL3ST2Q9H3Q3 398 aa17.14■□□□□ 0.33
UPF3A-202ENST00000375299 C7orf69Q9H7B7 122 aa17.14■□□□□ 0.33
UPF3A-202ENST00000375299 C10orf113Q5VZT2 155 aa17.14■□□□□ 0.33
UPF3A-202ENST00000375299 KIR3DL3Q8N743 410 aa17.14■□□□□ 0.33
UPF3A-202ENST00000375299 OR2D3Q8NGH3 330 aa17.14■□□□□ 0.33
UPF3A-202ENST00000375299 OR1L4Q8NGR5 311 aa17.14■□□□□ 0.33
UPF3A-202ENST00000375299 PLSCR4Q9NRQ2 329 aa17.14■□□□□ 0.33
UPF3A-202ENST00000375299 RAI1Q7Z5J4 1906 aaPredicted RBP17.14■□□□□ 0.33
UPF3A-202ENST00000375299 A0A1B0GXF2 115 aa17.13■□□□□ 0.33
UPF3A-202ENST00000375299 K7EP13 123 aa17.13■□□□□ 0.33
UPF3A-202ENST00000375299 SPRY3O43610 288 aa17.13■□□□□ 0.33
UPF3A-202ENST00000375299 SSBP2P81877 361 aaPredicted RBP17.13■□□□□ 0.33
UPF3A-202ENST00000375299 SLC25A48Q6ZT89 311 aaKnown RBP17.13■□□□□ 0.33
UPF3A-202ENST00000375299 BHLHA15Q7RTS1 189 aaPredicted RBP17.13■□□□□ 0.33
UPF3A-202ENST00000375299 ZNF596Q8TC21 504 aa17.13■□□□□ 0.33
UPF3A-202ENST00000375299 FAM222BQ8WU58 562 aa17.13■□□□□ 0.33
UPF3A-202ENST00000375299 PCNX2A6NKB5 2137 aa17.13■□□□□ 0.33
UPF3A-202ENST00000375299 CORTO00230 105 aa17.13■□□□□ 0.33
UPF3A-202ENST00000375299 TNFSF4P23510 183 aa17.13■□□□□ 0.33
UPF3A-202ENST00000375299 URB1-AS1Q96HZ7 61 aa17.13■□□□□ 0.33
UPF3A-202ENST00000375299 TMEM70Q9BUB7 260 aa17.13■□□□□ 0.33
UPF3A-202ENST00000375299 A0A1W2PN81 502 aa17.12■□□□□ 0.33
UPF3A-202ENST00000375299 VWC2LB2RUY7 222 aa17.12■□□□□ 0.33
UPF3A-202ENST00000375299 ERHP84090 104 aaKnown RBP17.12■□□□□ 0.33
UPF3A-202ENST00000375299 ZNF71Q9NQZ8 489 aaPredicted RBP17.12■□□□□ 0.33
UPF3A-202ENST00000375299 NDUFA4L2Q9NRX3 87 aa17.12■□□□□ 0.33
UPF3A-202ENST00000375299 CLEC5AQ9NY25 188 aa17.12■□□□□ 0.33
UPF3A-202ENST00000375299 ZNRD1Q9P1U0 126 aa17.12■□□□□ 0.33
UPF3A-202ENST00000375299 SLC25A15Q9Y619 301 aa17.12■□□□□ 0.33
UPF3A-202ENST00000375299 PRR33A8MZF0 331 aa17.11■□□□□ 0.33
UPF3A-202ENST00000375299 BPIFB3P59826 476 aa17.11■□□□□ 0.33
UPF3A-202ENST00000375299 FBLN7Q53RD9 439 aa17.11■□□□□ 0.33
UPF3A-202ENST00000375299 PATE2Q6UY27 113 aa17.11■□□□□ 0.33
UPF3A-202ENST00000375299 ZNF841Q6ZN19 808 aa17.11■□□□□ 0.33
UPF3A-202ENST00000375299 C22orf15Q8WYQ4 148 aa17.11■□□□□ 0.33
UPF3A-202ENST00000375299 FXYD5Q96DB9 178 aa17.11■□□□□ 0.33
UPF3A-202ENST00000375299 ZNF430Q9H8G1 570 aaPredicted RBP17.11■□□□□ 0.33
UPF3A-202ENST00000375299 NBEAQ8NFP9 2946 aa17.11■□□□□ 0.33
UPF3A-202ENST00000375299 LOC105371242A0A075B767 164 aa17.11■□□□□ 0.33
UPF3A-202ENST00000375299 FAM162BQ5T6X4 162 aa17.11■□□□□ 0.33
UPF3A-202ENST00000375299 FAM169BQ8N8A8 192 aa17.11■□□□□ 0.33
UPF3A-202ENST00000375299 RPUSD1Q9UJJ7 312 aaKnown RBP17.11■□□□□ 0.33
UPF3A-202ENST00000375299 IGHV2-70DA0A0C4DH43 119 aa17.1■□□□□ 0.33
UPF3A-202ENST00000375299 GNG5P63218 68 aa17.1■□□□□ 0.33
UPF3A-202ENST00000375299 TMEM30BQ3MIR4 351 aa17.1■□□□□ 0.33
UPF3A-202ENST00000375299 FAM120AOSQ5T036 256 aa17.1■□□□□ 0.33
UPF3A-202ENST00000375299 RND1Q92730 232 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms