RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 B9A039 149 aa9.6□□□□□ -0.87
PTCH1-203ENST00000375274 ZNF124Q15973 351 aa9.6□□□□□ -0.87
PTCH1-203ENST00000375274 SPSB3Q6PJ21 355 aa9.6□□□□□ -0.87
PTCH1-203ENST00000375274 NIT1Q86X76 327 aa9.6□□□□□ -0.87
PTCH1-203ENST00000375274 A0A0G2JRQ6 117 aa9.6□□□□□ -0.87
PTCH1-203ENST00000375274 PRCDQ00LT1 54 aa9.6□□□□□ -0.87
PTCH1-203ENST00000375274 C1orf147Q96MC9 270 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-203ENST00000375274 DERL1Q9BUN8 251 aa9.6□□□□□ -0.87
PTCH1-203ENST00000375274 DPM3Q9P2X0 92 aa9.6□□□□□ -0.87
PTCH1-203ENST00000375274 FOXA2Q9Y261 457 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-203ENST00000375274 S4R3C0 116 aa9.6□□□□□ -0.87
PTCH1-203ENST00000375274 OR11H12B2RN74 326 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 SS18L1O75177 396 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-203ENST00000375274 FAM90A2PQ658T7 463 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 OR11H1Q8NG94 326 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 OR11H2Q8NH07 326 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 USF3Q68DE3 2245 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 TRAV8-6A0A0B4J262 113 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 MUC21A0A0G2JKD1 596 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 MUC21A0A140T8X8 626 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 GNG5P63218 68 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 MUC21Q5SSG8 566 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 Q6AWC8 147 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 Q6ZRM9 215 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 CIARTQ8N365 385 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-203ENST00000375274 LOC105371242A0A075B767 164 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 NTN3O00634 580 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-203ENST00000375274 CA1P00915 261 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-203ENST00000375274 NPPCP23582 126 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 TFPI2P48307 235 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 Q6ZS49 121 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 TMEM256Q8N2U0 113 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 EPDR1Q9UM22 224 aa9.59□□□□□ -0.87
PTCH1-203ENST00000375274 TRAV9-2A0A087WT02 112 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 C17orf100A8MU93 164 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 DMRTA2Q96SC8 542 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 AGMATQ9BSE5 352 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 CHODLQ9H9P2 273 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 SEMA5BQ9P283 1151 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 E9PLN8 166 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 TNFSF13O75888 250 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 TRBV6-6A0A0A6YYG2 114 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 ASCL4Q6XD76 172 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 ORMDL3Q8N138 153 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 SLX1AQ9BQ83 275 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 TMEM160Q9NX00 188 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 SRRM5B3KS81 715 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 APOBEC3AP31941 199 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-203ENST00000375274 OR10J3Q5JRS4 329 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 ELOVL5Q9NYP7 299 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 C21orf62Q9NYP8 219 aa9.58□□□□□ -0.88
PTCH1-203ENST00000375274 A0A1B0GW15 77 aa9.57□□□□□ -0.88
PTCH1-203ENST00000375274 H7C2G1 150 aa9.57□□□□□ -0.88
PTCH1-203ENST00000375274 SMIM13P0DJ93 91 aa9.57□□□□□ -0.88
PTCH1-203ENST00000375274 C1orf194Q5T5A4 169 aa9.57□□□□□ -0.88
PTCH1-203ENST00000375274 FOXL2NBQ6ZUU3 175 aa9.57□□□□□ -0.88
PTCH1-203ENST00000375274 BEND2Q8NDZ0 799 aa9.57□□□□□ -0.88
PTCH1-203ENST00000375274 SEPSECSQ9HD40 501 aaKnown RBP9.57□□□□□ -0.88
PTCH1-203ENST00000375274 TCRBV4S1A1TA0A5B7 111 aa9.57□□□□□ -0.88
PTCH1-203ENST00000375274 PRSS2P07478 247 aa9.57□□□□□ -0.88
PTCH1-203ENST00000375274 FNDC1Q4ZHG4 1894 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-203ENST00000375274 GPX1P07203 203 aa9.57□□□□□ -0.88
PTCH1-203ENST00000375274 EBLN2Q6P2I7 272 aa9.57□□□□□ -0.88
PTCH1-203ENST00000375274 NLRC5Q86WI3 1866 aa9.57□□□□□ -0.88
PTCH1-203ENST00000375274 IL18BPO95998 194 aa9.57□□□□□ -0.88
PTCH1-203ENST00000375274 COX6CP09669 75 aa9.57□□□□□ -0.88
PTCH1-203ENST00000375274 HIST1H1AQ02539 215 aaPredicted RBP9.57□□□□□ -0.88
PTCH1-203ENST00000375274 ZNF524Q96C55 264 aa9.57□□□□□ -0.88
PTCH1-203ENST00000375274 SMIM12Q96EX1 92 aa9.57□□□□□ -0.88
PTCH1-203ENST00000375274 LILRA1O75019 489 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 NDUFS6O75380 124 aaKnown RBP9.56□□□□□ -0.88
PTCH1-203ENST00000375274 WISP1O95388 367 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 LINC00614P0C842 121 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 FAM53AQ6NSI3 398 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-203ENST00000375274 C9JCJ5 164 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 BSPH1Q075Z2 132 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 SPATA31B1PQ5VZV4 182 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 TTC9CQ8N5M4 171 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 SPRR3Q9UBC9 169 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 ANAPC10Q9UM13 185 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 THADAQ6YHU6 1953 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 SRCAPQ6ZRS2 3230 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 SELLP14151 372 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 DLX6P56179 175 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 ZCCHC24Q8N2G6 241 aaKnown RBP9.56□□□□□ -0.88
PTCH1-203ENST00000375274 VOPP1Q96AW1 172 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 ALKBH7Q9BT30 221 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-203ENST00000375274 OTORQ9NRC9 128 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 TRPM7Q96QT4 1865 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 IGHV3-49A0A0A0MS15 119 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 UCNP55089 124 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 CSRP2Q16527 193 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 OR10W1Q8NGF6 305 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 TSKUQ8WUA8 353 aa9.56□□□□□ -0.88
PTCH1-203ENST00000375274 RPUSD1Q9UJJ7 312 aaKnown RBP9.56□□□□□ -0.88
PTCH1-203ENST00000375274 IGHV1-18A0A0C4DH31 117 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 ATP5LO75964 103 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 C20orf204Q6ZNR8 217 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 PPP1R27Q86WC6 154 aa9.55□□□□□ -0.88
PTCH1-203ENST00000375274 ZNF257Q9Y2Q1 563 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms