RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 SPINK9Q5DT21 86 aa10.21□□□□□ -0.77
PTCH1-202ENST00000375271 PSMG4Q5JS54 123 aa10.21□□□□□ -0.77
PTCH1-202ENST00000375271 TBC1D26Q86UD7 250 aa10.21□□□□□ -0.77
PTCH1-202ENST00000375271 MRGPRFQ96AM1 343 aa10.21□□□□□ -0.77
PTCH1-202ENST00000375271 FXYD6Q9H0Q3 95 aa10.21□□□□□ -0.77
PTCH1-202ENST00000375271 ZFAND3Q9H8U3 227 aa10.21□□□□□ -0.77
PTCH1-202ENST00000375271 FAM212BQ9NTI7 297 aaPredicted RBP10.21□□□□□ -0.77
PTCH1-202ENST00000375271 X6R8D5 127 aa10.21□□□□□ -0.77
PTCH1-202ENST00000375271 IGLV2-18A0A075B6J9 118 aa10.2□□□□□ -0.78
PTCH1-202ENST00000375271 CLEC2LP0C7M8 214 aa10.2□□□□□ -0.78
PTCH1-202ENST00000375271 AKR1C2P52895 323 aa10.2□□□□□ -0.78
PTCH1-202ENST00000375271 AP2S1P53680 142 aaPredicted RBP10.2□□□□□ -0.78
PTCH1-202ENST00000375271 LGALS9BQ3B8N2 356 aa10.2□□□□□ -0.78
PTCH1-202ENST00000375271 LILRB2Q8N423 598 aa10.2□□□□□ -0.78
PTCH1-202ENST00000375271 RNASE11Q8TAA1 199 aaKnown RBP10.2□□□□□ -0.78
PTCH1-202ENST00000375271 NRG4Q8WWG1 115 aa10.2□□□□□ -0.78
PTCH1-202ENST00000375271 CELA1Q9UNI1 258 aa10.2□□□□□ -0.78
PTCH1-202ENST00000375271 TEX48A0A1B0GUV7 120 aa10.19□□□□□ -0.78
PTCH1-202ENST00000375271 RTL8CO15255 209 aa10.19□□□□□ -0.78
PTCH1-202ENST00000375271 TMEM127O75204 238 aa10.19□□□□□ -0.78
PTCH1-202ENST00000375271 TMEM50AO95807 157 aa10.19□□□□□ -0.78
PTCH1-202ENST00000375271 SPART-AS1P0CW21 52 aa10.19□□□□□ -0.78
PTCH1-202ENST00000375271 HRH1P35367 487 aa10.19□□□□□ -0.78
PTCH1-202ENST00000375271 EMP1P54849 157 aa10.19□□□□□ -0.78
PTCH1-202ENST00000375271 C12orf74Q32Q52 190 aa10.19□□□□□ -0.78
PTCH1-202ENST00000375271 CROCCP3Q8IVE0 287 aa10.19□□□□□ -0.78
PTCH1-202ENST00000375271 SEC22AQ96IW7 307 aa10.19□□□□□ -0.78
PTCH1-202ENST00000375271 PLA2G2EQ9NZK7 142 aa10.19□□□□□ -0.78
PTCH1-202ENST00000375271 XCL2Q9UBD3 114 aa10.19□□□□□ -0.78
PTCH1-202ENST00000375271 MUC4Q99102 2169 aa10.19□□□□□ -0.78
PTCH1-202ENST00000375271 PKHD1P08F94 4074 aa10.19□□□□□ -0.78
PTCH1-202ENST00000375271 A0A1B0GU03 582 aa10.18□□□□□ -0.78
PTCH1-202ENST00000375271 RPS10-NUDT3A0A1W2PQS6 291 aa10.18□□□□□ -0.78
PTCH1-202ENST00000375271 TMEM189A5PLL7 270 aa10.18□□□□□ -0.78
PTCH1-202ENST00000375271 ANKRD65E5RJM6 399 aa10.18□□□□□ -0.78
PTCH1-202ENST00000375271 CLN5O75503 358 aa10.18□□□□□ -0.78
PTCH1-202ENST00000375271 GIG44P09565 113 aaPredicted RBP10.18□□□□□ -0.78
PTCH1-202ENST00000375271 HLA-DMAP28067 261 aa10.18□□□□□ -0.78
PTCH1-202ENST00000375271 PRSS3P35030 304 aa10.18□□□□□ -0.78
PTCH1-202ENST00000375271 UBE2NLQ5JXB2 153 aa10.18□□□□□ -0.78
PTCH1-202ENST00000375271 SPARTQ8N0X7 666 aa10.18□□□□□ -0.78
PTCH1-202ENST00000375271 TRAV30A0A087WSZ9 112 aa10.17□□□□□ -0.78
PTCH1-202ENST00000375271 PGAM2P15259 253 aa10.17□□□□□ -0.78
PTCH1-202ENST00000375271 CRYBB3P26998 211 aa10.17□□□□□ -0.78
PTCH1-202ENST00000375271 PPP5CP53041 499 aa10.17□□□□□ -0.78
PTCH1-202ENST00000375271 TAS2R20P59543 309 aa10.17□□□□□ -0.78
PTCH1-202ENST00000375271 RAB40CQ96S21 281 aa10.17□□□□□ -0.78
PTCH1-202ENST00000375271 Q9H521 79 aa10.17□□□□□ -0.78
PTCH1-202ENST00000375271 AGRNO00468 2067 aa10.17□□□□□ -0.78
PTCH1-202ENST00000375271 IGHV3OR16-12A0A075B7B8 117 aa10.16□□□□□ -0.78
PTCH1-202ENST00000375271 SMIM31A0A1B0GVY4 71 aa10.16□□□□□ -0.78
PTCH1-202ENST00000375271 GSTZ1O43708 216 aaPredicted RBP10.16□□□□□ -0.78
PTCH1-202ENST00000375271 HNRNPCP07910 306 aaKnown RBP eCLIP10.16□□□□□ -0.78
PTCH1-202ENST00000375271 HTN3P15516 51 aa10.16□□□□□ -0.78
PTCH1-202ENST00000375271 TRIM16LQ309B1 348 aa10.16□□□□□ -0.78
PTCH1-202ENST00000375271 SAMD12Q8N8I0 201 aa10.16□□□□□ -0.78
PTCH1-202ENST00000375271 DCANP1Q8TF63 244 aa10.16□□□□□ -0.78
PTCH1-202ENST00000375271 Q8WTZ3 238 aa10.16□□□□□ -0.78
PTCH1-202ENST00000375271 FAM210BQ96KR6 192 aa10.16□□□□□ -0.78
PTCH1-202ENST00000375271 RAB26Q9ULW5 256 aa10.16□□□□□ -0.78
PTCH1-202ENST00000375271 TMED3Q9Y3Q3 217 aa10.16□□□□□ -0.78
PTCH1-202ENST00000375271 C1orf134Q5TEV5 83 aa10.15□□□□□ -0.78
PTCH1-202ENST00000375271 ZNF575Q86XF7 245 aa10.15□□□□□ -0.78
PTCH1-202ENST00000375271 OR4X1Q8NH49 305 aa10.15□□□□□ -0.78
PTCH1-202ENST00000375271 RRNAD1Q96FB5 475 aaKnown RBP10.15□□□□□ -0.78
PTCH1-202ENST00000375271 RNF167Q9H6Y7 350 aa10.15□□□□□ -0.78
PTCH1-202ENST00000375271 SMIM9A6NGZ8 99 aa10.14□□□□□ -0.79
PTCH1-202ENST00000375271 NAT1P18440 290 aa10.14□□□□□ -0.79
PTCH1-202ENST00000375271 RCVRNP35243 200 aa10.14□□□□□ -0.79
PTCH1-202ENST00000375271 IZUMO4Q1ZYL8 232 aa10.14□□□□□ -0.79
PTCH1-202ENST00000375271 TIGITQ495A1 244 aa10.14□□□□□ -0.79
PTCH1-202ENST00000375271 CSNK1G2-AS1Q8NCQ2 148 aa10.14□□□□□ -0.79
PTCH1-202ENST00000375271 OR1S2Q8NGQ3 325 aa10.14□□□□□ -0.79
PTCH1-202ENST00000375271 PFDN2Q9UHV9 154 aa10.14□□□□□ -0.79
PTCH1-202ENST00000375271 RFNGQ9Y644 331 aa10.14□□□□□ -0.79
PTCH1-202ENST00000375271 C16orf90A8MZG2 172 aa10.13□□□□□ -0.79
PTCH1-202ENST00000375271 IGKV1-39P01597 117 aa10.13□□□□□ -0.79
PTCH1-202ENST00000375271 IGKV1D-39P04432 117 aa10.13□□□□□ -0.79
PTCH1-202ENST00000375271 RNASE2P10153 161 aaKnown RBP10.13□□□□□ -0.79
PTCH1-202ENST00000375271 ETV6P41212 452 aa10.13□□□□□ -0.79
PTCH1-202ENST00000375271 Q6ZRM9 215 aa10.13□□□□□ -0.79
PTCH1-202ENST00000375271 C7orf50Q9BRJ6 194 aaKnown RBP10.13□□□□□ -0.79
PTCH1-202ENST00000375271 NIPSNAP3BQ9BS92 247 aa10.13□□□□□ -0.79
PTCH1-202ENST00000375271 ATG101Q9BSB4 218 aa10.13□□□□□ -0.79
PTCH1-202ENST00000375271 NRN1Q9NPD7 142 aa10.13□□□□□ -0.79
PTCH1-202ENST00000375271 ANAPC10Q9UM13 185 aa10.13□□□□□ -0.79
PTCH1-202ENST00000375271 FAT2Q9NYQ8 4349 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 DNAH2Q9P225 4427 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 FAM90A26D6RGX4 464 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 INS-IGF2F8WCM5 200 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 IGKV3-20P01619 116 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 IL4P05112 153 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 SLC25A4P12235 298 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 NUP62P37198 522 aaPredicted RBP10.12□□□□□ -0.79
PTCH1-202ENST00000375271 HTR2BP41595 481 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 RPL5P46777 297 aaKnown RBP10.12□□□□□ -0.79
PTCH1-202ENST00000375271 UCP3P55916 312 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 NEDD8Q15843 81 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 RNF212Q495C1 297 aa10.12□□□□□ -0.79
PTCH1-202ENST00000375271 C16orf54Q6UWD8 224 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms