RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 FCN3O75636 299 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 MT-ND6P03923 174 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 OR10J4P0C629 311 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 AMTP48728 403 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 GNG4P50150 75 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 RPL19P84098 196 aaKnown RBP13.75□□□□□ -0.21
PHF1-202ENST00000374516 SPATA45Q537H7 98 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 WDR73Q6P4I2 378 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 TMEM136Q6ZRR5 245 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 TCF19Q9Y242 345 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 ARFGEF3Q5TH69 2177 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 PPIAL4EA0A075B759 164 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 PPIAL4DF5H284 164 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 PPIAL4FP0DN26 164 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 CENPWQ5EE01 88 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 TMEM140Q9NV12 185 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 ZNRD1Q9P1U0 126 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 SLC25A10Q9UBX3 287 aaPredicted RBP13.75□□□□□ -0.21
PHF1-202ENST00000374516 PPIAL4AQ9Y536 164 aa13.75□□□□□ -0.21
PHF1-202ENST00000374516 ZNF253O75346 499 aa13.74□□□□□ -0.21
PHF1-202ENST00000374516 CRYBB3P26998 211 aa13.74□□□□□ -0.21
PHF1-202ENST00000374516 ADORA2A-AS1P86434 159 aa13.74□□□□□ -0.21
PHF1-202ENST00000374516 RAB31Q13636 194 aa13.74□□□□□ -0.21
PHF1-202ENST00000374516 LYPD2Q6UXB3 125 aa13.74□□□□□ -0.21
PHF1-202ENST00000374516 PQLC2Q6ZP29 291 aa13.74□□□□□ -0.21
PHF1-202ENST00000374516 RCHY1Q96PM5 261 aa13.74□□□□□ -0.21
PHF1-202ENST00000374516 RNASE7Q9H1E1 156 aaKnown RBP13.74□□□□□ -0.21
PHF1-202ENST00000374516 NCOR1P1Q9H4R4 102 aa13.74□□□□□ -0.21
PHF1-202ENST00000374516 SPTBN1Q01082 2364 aaKnown RBP13.74□□□□□ -0.21
PHF1-202ENST00000374516 SAA2P0DJI9 122 aaPredicted RBP13.74□□□□□ -0.21
PHF1-202ENST00000374516 APOBEC3AP31941 199 aaPredicted RBP13.74□□□□□ -0.21
PHF1-202ENST00000374516 MIR17HGQ75NE6 70 aa13.74□□□□□ -0.21
PHF1-202ENST00000374516 LYG1Q8N1E2 194 aa13.74□□□□□ -0.21
PHF1-202ENST00000374516 C11orf42Q8N5U0 333 aa13.74□□□□□ -0.21
PHF1-202ENST00000374516 KCNS1Q96KK3 526 aa13.74□□□□□ -0.21
PHF1-202ENST00000374516 UQCR10Q9UDW1 63 aa13.74□□□□□ -0.21
PHF1-202ENST00000374516 TANC2Q9HCD6 1990 aa13.74□□□□□ -0.21
PHF1-202ENST00000374516 NKX6-3A6NJ46 265 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 OR5G3P0C626 314 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 SLC35B1P78383 322 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 PRR20EP86478 221 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 PRR20CP86479 221 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 PRR20DP86480 221 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 PRR20BP86481 221 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 PRR20AP86496 221 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 S1PR3Q99500 378 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 IDI2-AS1Q9NZ38 188 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 ACTL6BO94805 426 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 IGLC2P0DOY2 106 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 IGLC3P0DOY3 106 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 PMCHP20382 165 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 PSG5Q15238 335 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 COX19Q49B96 90 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 STPG4Q8N801 248 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 DNAJC4Q9NNZ3 241 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 OSTCQ9NRP0 149 aa13.73□□□□□ -0.21
PHF1-202ENST00000374516 hADV38S2A0JD32 116 aa13.72□□□□□ -0.21
PHF1-202ENST00000374516 HYPMO75409 117 aa13.72□□□□□ -0.21
PHF1-202ENST00000374516 LINC00869P0C866 280 aa13.72□□□□□ -0.21
PHF1-202ENST00000374516 CCL3L1P16619 93 aa13.72□□□□□ -0.21
PHF1-202ENST00000374516 IGFBP2P18065 325 aa13.72□□□□□ -0.21
PHF1-202ENST00000374516 NPY1RP25929 384 aa13.72□□□□□ -0.21
PHF1-202ENST00000374516 PRRX1P54821 245 aa13.72□□□□□ -0.21
PHF1-202ENST00000374516 FXYD3Q14802 87 aa13.72□□□□□ -0.21
PHF1-202ENST00000374516 H1FXQ92522 213 aaKnown RBP13.72□□□□□ -0.21
PHF1-202ENST00000374516 HRNRQ86YZ3 2850 aaPredicted RBP13.72□□□□□ -0.21
PHF1-202ENST00000374516 TCF21O43680 179 aa13.72□□□□□ -0.21
PHF1-202ENST00000374516 ZNF324O75467 553 aaPredicted RBP13.72□□□□□ -0.21
PHF1-202ENST00000374516 REG1AP05451 166 aa13.72□□□□□ -0.21
PHF1-202ENST00000374516 SLC24A4Q8NFF2 622 aa13.72□□□□□ -0.21
PHF1-202ENST00000374516 RAB9BQ9NP90 201 aa13.72□□□□□ -0.21
PHF1-202ENST00000374516 ARL2-SNX15V9GYD0 113 aa13.72□□□□□ -0.21
PHF1-202ENST00000374516 LYNX1G3V0Z9 82 aa13.71□□□□□ -0.21
PHF1-202ENST00000374516 BMPR1BO00238 502 aa13.71□□□□□ -0.21
PHF1-202ENST00000374516 C3orf79P0CE67 100 aa13.71□□□□□ -0.21
PHF1-202ENST00000374516 LYNX1P0DP58 116 aa13.71□□□□□ -0.21
PHF1-202ENST00000374516 SRIP30626 198 aa13.71□□□□□ -0.21
PHF1-202ENST00000374516 TCL1AP56279 114 aa13.71□□□□□ -0.21
PHF1-202ENST00000374516 FBXL19-AS1Q494R0 122 aa13.71□□□□□ -0.21
PHF1-202ENST00000374516 TIGITQ495A1 244 aa13.71□□□□□ -0.21
PHF1-202ENST00000374516 TXN2Q99757 166 aa13.71□□□□□ -0.21
PHF1-202ENST00000374516 TMEM167BQ9NRX6 74 aa13.71□□□□□ -0.21
PHF1-202ENST00000374516 HCFC1P51610 2035 aa13.71□□□□□ -0.22
PHF1-202ENST00000374516 ISLRO14498 428 aa13.7□□□□□ -0.22
PHF1-202ENST00000374516 NDUFB8O95169 186 aa13.7□□□□□ -0.22
PHF1-202ENST00000374516 CA2P00918 260 aa13.7□□□□□ -0.22
PHF1-202ENST00000374516 Q6ZN92 141 aa13.7□□□□□ -0.22
PHF1-202ENST00000374516 PKD1L2Q7Z442 2459 aa13.7□□□□□ -0.22
PHF1-202ENST00000374516 NIT1Q86X76 327 aa13.7□□□□□ -0.22
PHF1-202ENST00000374516 ZNF439Q8NDP4 499 aa13.7□□□□□ -0.22
PHF1-202ENST00000374516 CORO2AQ92828 525 aa13.7□□□□□ -0.22
PHF1-202ENST00000374516 LAMTOR2Q9Y2Q5 125 aa13.7□□□□□ -0.22
PHF1-202ENST00000374516 C15orf61A6NNL5 157 aa13.7□□□□□ -0.22
PHF1-202ENST00000374516 B9A039 149 aa13.7□□□□□ -0.22
PHF1-202ENST00000374516 TMEM200BQ69YZ2 307 aa13.7□□□□□ -0.22
PHF1-202ENST00000374516 CTSZQ9UBR2 303 aa13.7□□□□□ -0.22
PHF1-202ENST00000374516 RPUSD1Q9UJJ7 312 aaKnown RBP13.7□□□□□ -0.22
PHF1-202ENST00000374516 LINC00312Q9Y6C7 94 aa13.7□□□□□ -0.22
PHF1-202ENST00000374516 IGHV1-69-2A0A0G2JMI3 117 aa13.69□□□□□ -0.22
PHF1-202ENST00000374516 HLA-DQA1P01909 254 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms