RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 PAX1P15863 534 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 INO80CQ6PI98 192 aaPredicted RBP8.55□□□□□ -1.04
CD28-202ENST00000374481 FAM222BQ8WU58 562 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 ZNF581Q9P0T4 197 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 ZNHIT1O43257 154 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 DPM2O94777 84 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 GAB4Q2WGN9 574 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 TMEM196Q5HYL7 178 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 COQ2Q96H96 371 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 KLK15Q9H2R5 256 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 YAE1D1Q9NRH1 226 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 LILRA5A6NI73 299 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 CTSBP07858 339 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 IGLV3-21P80748 117 aaPredicted RBP8.55□□□□□ -1.04
CD28-202ENST00000374481 AMTNQ6UX39 209 aa8.55□□□□□ -1.04
CD28-202ENST00000374481 GFRA3O60609 400 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 CELA2BP08218 269 aaPredicted RBP8.54□□□□□ -1.04
CD28-202ENST00000374481 CCDC144NLQ6NUI1 221 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 GTSCR1Q86UQ5 136 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 DECR2Q9NUI1 292 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 TGFBR3LH3BV60 316 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 IGKCP01834 107 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 CYB561P49447 251 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 KIR3DL3Q8N743 410 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 PPDPFLQ8WWR9 84 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 ONECUT1Q9UBC0 465 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 KLF12Q9Y4X4 402 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 ARHGEF17Q96PE2 2063 aaPredicted RBP8.54□□□□□ -1.04
CD28-202ENST00000374481 hCG_38984A0A1B0GV85 526 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 MOSP00540 346 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 CFIP05156 583 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 SP9P0CG40 484 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 GNG5P63218 68 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 RPRMLQ8N4K4 120 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 RAXQ9Y2V3 346 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 TRIOBPQ9H2D6 2365 aa8.54□□□□□ -1.04
CD28-202ENST00000374481 SPTY2D1-AS1A0A0U1RR47 76 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 NDUFA3O95167 84 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 PRSS2P07478 247 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 PRSS57Q6UWY2 283 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 LRRC29Q8WV35 223 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 HARBI1Q96MB7 349 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 PGPEP1Q9NXJ5 209 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 HIGD1AQ9Y241 93 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 IGHV1-24A0A0C4DH33 117 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 FOXH1O75593 365 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 MRPS21P82921 87 aaKnown RBP8.53□□□□□ -1.04
CD28-202ENST00000374481 RNF166Q96A37 237 aaPredicted RBP8.53□□□□□ -1.04
CD28-202ENST00000374481 IFITM1P13164 125 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 PPIFP30405 207 aaKnown RBP8.53□□□□□ -1.04
CD28-202ENST00000374481 LILRA6Q6PI73 481 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 INSIG2Q9Y5U4 225 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 ASXL3Q9C0F0 2248 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 TRBV20-1A0A075B6N2 111 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 H0YJW9 148 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 PLA2G5P39877 138 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 KLF17Q5JT82 389 aaPredicted RBP8.53□□□□□ -1.04
CD28-202ENST00000374481 C10orf128Q5T292 105 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 TMEM178AQ8NBL3 297 aa8.53□□□□□ -1.04
CD28-202ENST00000374481 SDK2Q58EX2 2172 aa8.52□□□□□ -1.04
CD28-202ENST00000374481 LEPP41159 167 aa8.52□□□□□ -1.04
CD28-202ENST00000374481 SRSF7Q16629 238 aaKnown RBP eCLIP8.52□□□□□ -1.04
CD28-202ENST00000374481 TMEM95Q3KNT9 176 aa8.52□□□□□ -1.04
CD28-202ENST00000374481 LINC00305Q7Z4B0 112 aa8.52□□□□□ -1.04
CD28-202ENST00000374481 NPIPB3Q92617 1050 aa8.52□□□□□ -1.04
CD28-202ENST00000374481 SLC25A2Q9BXI2 301 aa8.52□□□□□ -1.04
CD28-202ENST00000374481 ZNF785A8K8V0 405 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 IGHV3-48P01763 117 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 TCTEX1D4Q5JR98 221 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 C8orf86Q6ZUL3 223 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 LHFPL4Q7Z7J7 247 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 WDR31Q8NA23 367 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 NFAM1Q8NET5 270 aaPredicted RBP8.52□□□□□ -1.05
CD28-202ENST00000374481 FER1L6-AS2Q96M78 137 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 IGHV3-21A0A0B4J1V1 117 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 PTGDSP41222 190 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 Q6AWC8 147 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 MGST2Q99735 147 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 ZSWIM8A7E2V4 1837 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 TRBV20OR9-2A0A075B6H5 130 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 K7ERJ3 54 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 PYYP10082 97 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 FCGR2BP31994 310 aaPredicted RBP8.52□□□□□ -1.05
CD28-202ENST00000374481 FXYD7P58549 80 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 WFDC2Q14508 124 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 TMEM155Q4W5P6 130 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 C1orf122Q6ZSJ8 110 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 C1QTNF4Q9BXJ3 329 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 EPDR1Q9UM22 224 aa8.52□□□□□ -1.05
CD28-202ENST00000374481 PLXNB2O15031 1838 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 A0A0J9YW62 118 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 C5orf63A6NC05 138 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 CTRLP40313 264 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 ATP5G2Q06055 141 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 ZNF146Q15072 292 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 ZC2HC1BQ5TFG8 222 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 SPANXN1Q5VSR9 72 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 FMC1Q96HJ9 113 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 RASL11BQ9BPW5 248 aa8.51□□□□□ -1.05
CD28-202ENST00000374481 WDR90Q96KV7 1748 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms