RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 CHRDL1Q9BU40 450 aa14.34□□□□□ -0.11
TRAPPC3-204ENST00000373166 SRRQ9GZT4 340 aa14.34□□□□□ -0.11
TRAPPC3-204ENST00000373166 DAZ1Q9NQZ3 744 aaKnown RBP14.34□□□□□ -0.11
TRAPPC3-204ENST00000373166 MRPL27Q9P0M9 148 aaKnown RBP14.34□□□□□ -0.11
TRAPPC3-204ENST00000373166 PIGBOS1A0A0B4J2F0 54 aa14.33□□□□□ -0.12
TRAPPC3-204ENST00000373166 FCGR2BP31994 310 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC3-204ENST00000373166 RELQ04864 619 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC3-204ENST00000373166 TRIQKQ629K1 86 aa14.33□□□□□ -0.12
TRAPPC3-204ENST00000373166 BTNL8Q6UX41 500 aa14.33□□□□□ -0.12
TRAPPC3-204ENST00000373166 GPR146Q96CH1 333 aa14.33□□□□□ -0.12
TRAPPC3-204ENST00000373166 WDR89Q96FK6 387 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC3-204ENST00000373166 SLC25A21Q9BQT8 299 aaPredicted RBP14.33□□□□□ -0.12
TRAPPC3-204ENST00000373166 OVOL2Q9BRP0 275 aa14.33□□□□□ -0.12
TRAPPC3-204ENST00000373166 C20orf24Q9BUV8 137 aa14.33□□□□□ -0.12
TRAPPC3-204ENST00000373166 PRR13Q9NZ81 148 aa14.33□□□□□ -0.12
TRAPPC3-204ENST00000373166 CACFD1Q9UGQ2 172 aa14.33□□□□□ -0.12
TRAPPC3-204ENST00000373166 MLXQ9UH92 298 aa14.33□□□□□ -0.12
TRAPPC3-204ENST00000373166 GNG7O60262 68 aa14.32□□□□□ -0.12
TRAPPC3-204ENST00000373166 SULT1A3P0DMM9 295 aa14.32□□□□□ -0.12
TRAPPC3-204ENST00000373166 SULT1A4P0DMN0 295 aa14.32□□□□□ -0.12
TRAPPC3-204ENST00000373166 RNASE2P10153 161 aaKnown RBP14.32□□□□□ -0.12
TRAPPC3-204ENST00000373166 ADMP35318 185 aa14.32□□□□□ -0.12
TRAPPC3-204ENST00000373166 SUPT4H1P63272 117 aaKnown RBP14.32□□□□□ -0.12
TRAPPC3-204ENST00000373166 TMEM61Q8N0U2 210 aa14.32□□□□□ -0.12
TRAPPC3-204ENST00000373166 LGI3Q8N145 548 aa14.32□□□□□ -0.12
TRAPPC3-204ENST00000373166 GGTLC1Q9BX51 225 aa14.32□□□□□ -0.12
TRAPPC3-204ENST00000373166 KMT2AQ03164 3969 aa14.32□□□□□ -0.12
TRAPPC3-204ENST00000373166 A0A0B4J2A0 478 aa14.31□□□□□ -0.12
TRAPPC3-204ENST00000373166 IGHV3-48P01763 117 aa14.31□□□□□ -0.12
TRAPPC3-204ENST00000373166 CTSGP08311 255 aa14.31□□□□□ -0.12
TRAPPC3-204ENST00000373166 C8orf88P0DMB2 117 aa14.31□□□□□ -0.12
TRAPPC3-204ENST00000373166 NPBWR1P48145 328 aa14.31□□□□□ -0.12
TRAPPC3-204ENST00000373166 DUSP18Q8NEJ0 188 aa14.31□□□□□ -0.12
TRAPPC3-204ENST00000373166 HEYLQ9NQ87 328 aaPredicted RBP14.31□□□□□ -0.12
TRAPPC3-204ENST00000373166 SHPKQ9UHJ6 478 aa14.31□□□□□ -0.12
TRAPPC3-204ENST00000373166 SELENOKQ9Y6D0 94 aa14.31□□□□□ -0.12
TRAPPC3-204ENST00000373166 LOC102724200A0A096LPH7 203 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC3-204ENST00000373166 CEBPZOSA8MTT3 80 aa14.3□□□□□ -0.12
TRAPPC3-204ENST00000373166 VAMP1P23763 118 aa14.3□□□□□ -0.12
TRAPPC3-204ENST00000373166 HTR2BP41595 481 aa14.3□□□□□ -0.12
TRAPPC3-204ENST00000373166 TMEM128Q5BJH2 165 aa14.3□□□□□ -0.12
TRAPPC3-204ENST00000373166 PVRIGQ6DKI7 326 aa14.3□□□□□ -0.12
TRAPPC3-204ENST00000373166 CEMP1Q6PRD7 247 aaPredicted RBP14.3□□□□□ -0.12
TRAPPC3-204ENST00000373166 RBPMS2Q6ZRY4 209 aaKnown RBP14.3□□□□□ -0.12
TRAPPC3-204ENST00000373166 IGHV3OR16-8A0A075B7F1 116 aa14.29□□□□□ -0.12
TRAPPC3-204ENST00000373166 TRAV25A0A0B4J276 109 aa14.29□□□□□ -0.12
TRAPPC3-204ENST00000373166 C15orf62A8K5M9 175 aa14.29□□□□□ -0.12
TRAPPC3-204ENST00000373166 YIF1AO95070 293 aa14.29□□□□□ -0.12
TRAPPC3-204ENST00000373166 NXPH3O95157 252 aa14.29□□□□□ -0.12
TRAPPC3-204ENST00000373166 OPRK1P41145 380 aa14.29□□□□□ -0.12
TRAPPC3-204ENST00000373166 CCR6P51684 374 aa14.29□□□□□ -0.12
TRAPPC3-204ENST00000373166 SMCO1Q147U7 214 aa14.29□□□□□ -0.12
TRAPPC3-204ENST00000373166 RBMS2Q15434 407 aaKnown RBP14.29□□□□□ -0.12
TRAPPC3-204ENST00000373166 BSXQ3C1V8 233 aa14.29□□□□□ -0.12
TRAPPC3-204ENST00000373166 OR52B4Q8NGK2 314 aa14.29□□□□□ -0.12
TRAPPC3-204ENST00000373166 KLK5Q9Y337 293 aaPredicted RBP14.29□□□□□ -0.12
TRAPPC3-204ENST00000373166 A0A0J9YWU9 116 aa14.28□□□□□ -0.12
TRAPPC3-204ENST00000373166 DUXBA0A1W2PPF3 345 aa14.28□□□□□ -0.12
TRAPPC3-204ENST00000373166 NAP1L6A6NFF2 107 aa14.28□□□□□ -0.12
TRAPPC3-204ENST00000373166 K7EMT4 169 aa14.28□□□□□ -0.12
TRAPPC3-204ENST00000373166 SCGB2A1O75556 95 aa14.28□□□□□ -0.12
TRAPPC3-204ENST00000373166 SCAF4O95104 1147 aaKnown RBP14.28□□□□□ -0.12
TRAPPC3-204ENST00000373166 BAK1Q16611 211 aa14.28□□□□□ -0.12
TRAPPC3-204ENST00000373166 ANKRD55Q3KP44 614 aa14.28□□□□□ -0.12
TRAPPC3-204ENST00000373166 NMSQ5H8A3 153 aa14.28□□□□□ -0.12
TRAPPC3-204ENST00000373166 LYZL2Q7Z4W2 148 aa14.28□□□□□ -0.12
TRAPPC3-204ENST00000373166 CENPSQ8N2Z9 138 aa14.28□□□□□ -0.12
TRAPPC3-204ENST00000373166 SLC24A4Q8NFF2 622 aa14.28□□□□□ -0.12
TRAPPC3-204ENST00000373166 DNAH10Q8IVF4 4471 aa14.27□□□□□ -0.12
TRAPPC3-204ENST00000373166 RPS10-NUDT3A0A1W2PQS6 291 aa14.27□□□□□ -0.13
TRAPPC3-204ENST00000373166 ZNF207O43670 478 aaKnown RBP14.27□□□□□ -0.13
TRAPPC3-204ENST00000373166 TNFRSF9Q07011 255 aa14.27□□□□□ -0.13
TRAPPC3-204ENST00000373166 RPP25LQ8N5L8 163 aaKnown RBP14.27□□□□□ -0.13
TRAPPC3-204ENST00000373166 PCLOQ9Y6V0 5065 aa14.27□□□□□ -0.13
TRAPPC3-204ENST00000373166 CENPXA8MT69 81 aa14.26□□□□□ -0.13
TRAPPC3-204ENST00000373166 C2orf83Q53S99 150 aa14.26□□□□□ -0.13
TRAPPC3-204ENST00000373166 LAMTOR1Q6IAA8 161 aa14.26□□□□□ -0.13
TRAPPC3-204ENST00000373166 WFDC3Q8IUB2 231 aa14.26□□□□□ -0.13
TRAPPC3-204ENST00000373166 OR1S1Q8NH92 325 aa14.26□□□□□ -0.13
TRAPPC3-204ENST00000373166 SPAG8Q99932 426 aaPredicted RBP14.26□□□□□ -0.13
TRAPPC3-204ENST00000373166 GINS3Q9BRX5 216 aa14.26□□□□□ -0.13
TRAPPC3-204ENST00000373166 A0A1B0GU03 582 aa14.25□□□□□ -0.13
TRAPPC3-204ENST00000373166 SFT2D2O95562 160 aa14.25□□□□□ -0.13
TRAPPC3-204ENST00000373166 BMI1P35226 326 aa14.25□□□□□ -0.13
TRAPPC3-204ENST00000373166 EWSR1Q01844 656 aaKnown RBP eCLIP14.25□□□□□ -0.13
TRAPPC3-204ENST00000373166 PPP1R1AQ13522 171 aa14.25□□□□□ -0.13
TRAPPC3-204ENST00000373166 ZNF600Q6ZNG1 722 aa14.25□□□□□ -0.13
TRAPPC3-204ENST00000373166 LYG2Q86SG7 212 aa14.25□□□□□ -0.13
TRAPPC3-204ENST00000373166 NOXA1Q86UR1 476 aa14.25□□□□□ -0.13
TRAPPC3-204ENST00000373166 OR10C1Q96KK4 312 aa14.25□□□□□ -0.13
TRAPPC3-204ENST00000373166 FNDC4Q9H6D8 234 aaPredicted RBP14.25□□□□□ -0.13
TRAPPC3-204ENST00000373166 HSPB7Q9UBY9 170 aa14.25□□□□□ -0.13
TRAPPC3-204ENST00000373166 TP53TG1Q9Y2A0 90 aa14.25□□□□□ -0.13
TRAPPC3-204ENST00000373166 IGHV7-4-1A0A0J9YVY3 117 aa14.24□□□□□ -0.13
TRAPPC3-204ENST00000373166 LINC00854A0A1B0GVQ3 168 aa14.24□□□□□ -0.13
TRAPPC3-204ENST00000373166 CLN5O75503 358 aa14.24□□□□□ -0.13
TRAPPC3-204ENST00000373166 NDUFB6O95139 128 aa14.24□□□□□ -0.13
TRAPPC3-204ENST00000373166 NPY1RP25929 384 aa14.24□□□□□ -0.13
TRAPPC3-204ENST00000373166 UBE2MP61081 183 aaKnown RBP14.24□□□□□ -0.13
TRAPPC3-204ENST00000373166 Q6ZWC4 215 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms