RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 JMJD8Q96S16 334 aa19.92■□□□□ 0.78
RAPGEF1-203ENST00000372195 ATP5LO75964 103 aa19.91■□□□□ 0.78
RAPGEF1-203ENST00000372195 OR5A1Q8NGJ0 315 aa19.91■□□□□ 0.78
RAPGEF1-203ENST00000372195 SPATA31B1PQ5VZV4 182 aa19.91■□□□□ 0.78
RAPGEF1-203ENST00000372195 NUDT10Q8NFP7 164 aa19.91■□□□□ 0.78
RAPGEF1-203ENST00000372195 MRPS16Q9Y3D3 137 aaKnown RBP19.91■□□□□ 0.78
RAPGEF1-203ENST00000372195 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP19.91■□□□□ 0.78
RAPGEF1-203ENST00000372195 NBR2O15453 112 aa19.91■□□□□ 0.78
RAPGEF1-203ENST00000372195 C1orf162Q8NEQ5 155 aaPredicted RBP19.91■□□□□ 0.78
RAPGEF1-203ENST00000372195 IGKV1-12A0A0C4DH73 117 aa19.9■□□□□ 0.78
RAPGEF1-203ENST00000372195 IGKV1D-12P01611 117 aa19.9■□□□□ 0.78
RAPGEF1-203ENST00000372195 NEUROG1Q92886 237 aa19.9■□□□□ 0.78
RAPGEF1-203ENST00000372195 PRDM13Q9H4Q3 707 aa19.9■□□□□ 0.78
RAPGEF1-203ENST00000372195 EPDR1Q9UM22 224 aa19.9■□□□□ 0.78
RAPGEF1-203ENST00000372195 RALGAPA2Q2PPJ7 1873 aa19.9■□□□□ 0.78
RAPGEF1-203ENST00000372195 KLHDC3Q9BQ90 382 aa19.9■□□□□ 0.78
RAPGEF1-203ENST00000372195 SEC16AO15027 2179 aa19.89■□□□□ 0.78
RAPGEF1-203ENST00000372195 SAMD13Q5VXD3 122 aa19.89■□□□□ 0.78
RAPGEF1-203ENST00000372195 C11orf44Q8N8P7 122 aa19.89■□□□□ 0.78
RAPGEF1-203ENST00000372195 YPEL1O60688 119 aa19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 CD33P20138 364 aa19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 EFNB3Q15768 340 aa19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 TMEM144Q7Z5S9 345 aa19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 YPEL2Q96QA6 119 aa19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 F8VVB4 439 aa19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 F8VWA3 439 aa19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 HGFACQ04756 655 aa19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 BEND2Q8NDZ0 799 aa19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 GP6Q9HCN6 339 aa19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 FOXF2Q12947 444 aa19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 PAPPA-AS1Q5QFB9 102 aa19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 RNF144BQ7Z419 303 aa19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 CIARTQ8N365 385 aaPredicted RBP19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 GTF3AQ92664 365 aaKnown RBP19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 SCN10AQ9Y5Y9 1956 aa19.89■□□□□ 0.77
RAPGEF1-203ENST00000372195 LCTP09848 1927 aa19.88■□□□□ 0.77
RAPGEF1-203ENST00000372195 C19orf67A6NJJ6 358 aa19.88■□□□□ 0.77
RAPGEF1-203ENST00000372195 SELLP14151 372 aa19.88■□□□□ 0.77
RAPGEF1-203ENST00000372195 FXYD7P58549 80 aa19.88■□□□□ 0.77
RAPGEF1-203ENST00000372195 COQ2Q96H96 371 aa19.88■□□□□ 0.77
RAPGEF1-203ENST00000372195 FOXD3Q9UJU5 478 aaPredicted RBP19.88■□□□□ 0.77
RAPGEF1-203ENST00000372195 CACNG8Q8WXS5 425 aa19.88■□□□□ 0.77
RAPGEF1-203ENST00000372195 GREB1LQ9C091 1923 aaPredicted RBP19.88■□□□□ 0.77
RAPGEF1-203ENST00000372195 MAP1BP46821 2468 aaKnown RBP19.88■□□□□ 0.77
RAPGEF1-203ENST00000372195 C5orf63A6NC05 138 aa19.88■□□□□ 0.77
RAPGEF1-203ENST00000372195 HEATR5BQ9P2D3 2071 aa19.88■□□□□ 0.77
RAPGEF1-203ENST00000372195 H7C1H1 209 aa19.88■□□□□ 0.77
RAPGEF1-203ENST00000372195 UBE2CO00762 179 aa19.88■□□□□ 0.77
RAPGEF1-203ENST00000372195 CACNA1IQ9P0X4 2223 aa19.88■□□□□ 0.77
RAPGEF1-203ENST00000372195 TRGV2A0A075B6R0 118 aa19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 TDGF1P13385 188 aa19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 CSRP2Q16527 193 aa19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 NRN1LQ496H8 165 aa19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 ZIC4Q8N9L1 334 aa19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 NEU4Q8WWR8 484 aaPredicted RBP19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 SNRNP200O75643 2136 aaKnown RBP19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 EFNA2O43921 213 aa19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 TRAV8-2A0A0B4J237 113 aa19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 IGKV1-27A0A075B6S5 117 aa19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 MLNRO43193 412 aa19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 TMEM105Q8N8V8 129 aa19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 NAA38Q9BRA0 125 aaKnown RBP19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 GAS1P54826 345 aa19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 NUTF2P61970 127 aaKnown RBP19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 RNF125Q96EQ8 232 aa19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 VKORC1Q9BQB6 163 aa19.87■□□□□ 0.77
RAPGEF1-203ENST00000372195 TCRBV4S1A1TA0A5B7 111 aa19.86■□□□□ 0.77
RAPGEF1-203ENST00000372195 NDUFAF3Q9BU61 184 aa19.86■□□□□ 0.77
RAPGEF1-203ENST00000372195 A0A0G2JMZ2 1700 aa19.86■□□□□ 0.77
RAPGEF1-203ENST00000372195 LRRC37A2A6NM11 1700 aa19.86■□□□□ 0.77
RAPGEF1-203ENST00000372195 CCL1P22362 96 aa19.86■□□□□ 0.77
RAPGEF1-203ENST00000372195 HEPN1Q6WQI6 88 aa19.86■□□□□ 0.77
RAPGEF1-203ENST00000372195 TRBV7-9A0A0J9YWB2 115 aa19.86■□□□□ 0.77
RAPGEF1-203ENST00000372195 MST1P26927 711 aa19.86■□□□□ 0.77
RAPGEF1-203ENST00000372195 DMRTC2Q8IXT2 367 aaPredicted RBP19.86■□□□□ 0.77
RAPGEF1-203ENST00000372195 ZNF257Q9Y2Q1 563 aa19.86■□□□□ 0.77
RAPGEF1-203ENST00000372195 C10orf55Q5SWW7 151 aa19.86■□□□□ 0.77
RAPGEF1-203ENST00000372195 TMEM133Q9H2Q1 129 aa19.86■□□□□ 0.77
RAPGEF1-203ENST00000372195 PGPEP1Q9NXJ5 209 aa19.86■□□□□ 0.77
RAPGEF1-203ENST00000372195 SVILO95425 2214 aa19.85■□□□□ 0.77
RAPGEF1-203ENST00000372195 A0A0G2JLM5 398 aa19.85■□□□□ 0.77
RAPGEF1-203ENST00000372195 HIST1H2BLQ99880 126 aa19.85■□□□□ 0.77
RAPGEF1-203ENST00000372195 IGKV2-40A0A087WW87 121 aaPredicted RBP19.85■□□□□ 0.77
RAPGEF1-203ENST00000372195 A0A0U1RRA0 63 aa19.85■□□□□ 0.77
RAPGEF1-203ENST00000372195 IGKV2D-40P01614 121 aaPredicted RBP19.85■□□□□ 0.77
RAPGEF1-203ENST00000372195 DUTP33316 252 aaKnown RBP19.85■□□□□ 0.77
RAPGEF1-203ENST00000372195 CFHR1Q03591 330 aa19.85■□□□□ 0.77
RAPGEF1-203ENST00000372195 GLRX5Q86SX6 157 aa19.85■□□□□ 0.77
RAPGEF1-203ENST00000372195 ZNF581Q9P0T4 197 aa19.85■□□□□ 0.77
RAPGEF1-203ENST00000372195 NPC2P61916 151 aa19.85■□□□□ 0.77
RAPGEF1-203ENST00000372195 MYOD1P15172 320 aa19.84■□□□□ 0.77
RAPGEF1-203ENST00000372195 FOXL1Q12952 345 aa19.84■□□□□ 0.77
RAPGEF1-203ENST00000372195 PSG8Q9UQ74 426 aa19.84■□□□□ 0.77
RAPGEF1-203ENST00000372195 RHOGP84095 191 aa19.84■□□□□ 0.77
RAPGEF1-203ENST00000372195 CRIM1Q9NZV1 1036 aa19.84■□□□□ 0.77
RAPGEF1-203ENST00000372195 TIMM23O14925 209 aa19.84■□□□□ 0.77
RAPGEF1-203ENST00000372195 FABP5P3A8MUU1 101 aa19.84■□□□□ 0.77
RAPGEF1-203ENST00000372195 LINC00271P0C7V0 271 aa19.84■□□□□ 0.77
RAPGEF1-203ENST00000372195 TIMP3P35625 211 aa19.84■□□□□ 0.77
RAPGEF1-203ENST00000372195 ASCL2Q99929 193 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms