RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 ZNF672Q499Z4 452 aaPredicted RBP16.56■□□□□ 0.24
VEGFA-204ENST00000372064 PVRIGQ6DKI7 326 aa16.56■□□□□ 0.24
VEGFA-204ENST00000372064 A0A0U1RQK1 487 aa16.56■□□□□ 0.24
VEGFA-204ENST00000372064 ZNF320A2RRD8 509 aa16.56■□□□□ 0.24
VEGFA-204ENST00000372064 TEX45Q8NA69 505 aa16.56■□□□□ 0.24
VEGFA-204ENST00000372064 THAP8Q8NA92 274 aa16.56■□□□□ 0.24
VEGFA-204ENST00000372064 FAM167A-AS1Q96KT0 104 aa16.56■□□□□ 0.24
VEGFA-204ENST00000372064 SLC25A2Q9BXI2 301 aa16.56■□□□□ 0.24
VEGFA-204ENST00000372064 HNF1AP20823 631 aa16.56■□□□□ 0.24
VEGFA-204ENST00000372064 CDPF1Q6NVV7 123 aa16.56■□□□□ 0.24
VEGFA-204ENST00000372064 IGKV1D-37A0A075B6S9 117 aa16.55■□□□□ 0.24
VEGFA-204ENST00000372064 A0A1W2PRE2 83 aa16.55■□□□□ 0.24
VEGFA-204ENST00000372064 IGHV3-48P01763 117 aa16.55■□□□□ 0.24
VEGFA-204ENST00000372064 GGTLC3B5MD39 225 aa16.55■□□□□ 0.24
VEGFA-204ENST00000372064 CRYGBP07316 175 aa16.55■□□□□ 0.24
VEGFA-204ENST00000372064 DNAJC4Q9NNZ3 241 aa16.55■□□□□ 0.24
VEGFA-204ENST00000372064 TCRBV4S1A1TA0A5B7 111 aa16.54■□□□□ 0.24
VEGFA-204ENST00000372064 ZZEF1O43149 2961 aa16.54■□□□□ 0.24
VEGFA-204ENST00000372064 RBP4P02753 201 aa16.54■□□□□ 0.24
VEGFA-204ENST00000372064 REG1AP05451 166 aa16.54■□□□□ 0.24
VEGFA-204ENST00000372064 CRYBB3P26998 211 aa16.54■□□□□ 0.24
VEGFA-204ENST00000372064 PRRX1P54821 245 aa16.54■□□□□ 0.24
VEGFA-204ENST00000372064 TRAV9-1A0A075B6T8 112 aa16.54■□□□□ 0.24
VEGFA-204ENST00000372064 IGLC7A0M8Q6 106 aa16.54■□□□□ 0.24
VEGFA-204ENST00000372064 MORN5Q5VZ52 161 aa16.54■□□□□ 0.24
VEGFA-204ENST00000372064 NPIPB3Q92617 1050 aa16.54■□□□□ 0.24
VEGFA-204ENST00000372064 IL36BQ9NZH7 164 aa16.54■□□□□ 0.24
VEGFA-204ENST00000372064 HELTA6NFD8 242 aa16.53■□□□□ 0.24
VEGFA-204ENST00000372064 LY6HO94772 140 aa16.53■□□□□ 0.24
VEGFA-204ENST00000372064 OR10J4P0C629 311 aa16.53■□□□□ 0.24
VEGFA-204ENST00000372064 BEND2Q8NDZ0 799 aa16.53■□□□□ 0.24
VEGFA-204ENST00000372064 AMBPP02760 352 aa16.53■□□□□ 0.24
VEGFA-204ENST00000372064 CNTFRP26992 372 aa16.53■□□□□ 0.24
VEGFA-204ENST00000372064 PRSS8Q16651 343 aa16.53■□□□□ 0.24
VEGFA-204ENST00000372064 BUB1B-PAK6H3BSN5 160 aa16.52■□□□□ 0.24
VEGFA-204ENST00000372064 SSX2Q16385 188 aa16.52■□□□□ 0.24
VEGFA-204ENST00000372064 CENPWQ5EE01 88 aa16.52■□□□□ 0.24
VEGFA-204ENST00000372064 C8orf46Q8TAG6 207 aa16.52■□□□□ 0.24
VEGFA-204ENST00000372064 PFDN5Q99471 154 aa16.52■□□□□ 0.24
VEGFA-204ENST00000372064 MRPL36Q9P0J6 103 aaKnown RBP16.52■□□□□ 0.24
VEGFA-204ENST00000372064 TRAPPC1Q9Y5R8 145 aa16.52■□□□□ 0.24
VEGFA-204ENST00000372064 SPTBN4Q9H254 2564 aa16.52■□□□□ 0.24
VEGFA-204ENST00000372064 PPIAL4CA0A0B4J2A2 164 aa16.52■□□□□ 0.24
VEGFA-204ENST00000372064 PPIAL4GP0DN37 164 aa16.52■□□□□ 0.24
VEGFA-204ENST00000372064 HIST1H1BP16401 226 aaKnown RBP16.52■□□□□ 0.24
VEGFA-204ENST00000372064 COX7A1P24310 79 aa16.52■□□□□ 0.24
VEGFA-204ENST00000372064 GNG4P50150 75 aa16.52■□□□□ 0.24
VEGFA-204ENST00000372064 MMD2Q8IY49 270 aa16.52■□□□□ 0.24
VEGFA-204ENST00000372064 CLEC7AQ9BXN2 247 aa16.52■□□□□ 0.24
VEGFA-204ENST00000372064 CRYGCP07315 174 aa16.52■□□□□ 0.23
VEGFA-204ENST00000372064 YPEL3P61236 119 aaPredicted RBP16.52■□□□□ 0.23
VEGFA-204ENST00000372064 ZNF90Q03938 601 aa16.52■□□□□ 0.23
VEGFA-204ENST00000372064 OR1L4Q8NGR5 311 aa16.52■□□□□ 0.23
VEGFA-204ENST00000372064 COL6A6A6NMZ7 2263 aa16.51■□□□□ 0.23
VEGFA-204ENST00000372064 TRAV5A0A0B4J249 113 aa16.51■□□□□ 0.23
VEGFA-204ENST00000372064 IGHV1-3A0A0C4DH29 117 aa16.51■□□□□ 0.23
VEGFA-204ENST00000372064 CNN1P51911 297 aaKnown RBP16.51■□□□□ 0.23
VEGFA-204ENST00000372064 SELENOTP62341 195 aa16.51■□□□□ 0.23
VEGFA-204ENST00000372064 MRPL41Q8IXM3 137 aaKnown RBP16.51■□□□□ 0.23
VEGFA-204ENST00000372064 PATE2Q6UY27 113 aa16.51■□□□□ 0.23
VEGFA-204ENST00000372064 INSIG2Q9Y5U4 225 aa16.51■□□□□ 0.23
VEGFA-204ENST00000372064 V9GYV3 84 aa16.51■□□□□ 0.23
VEGFA-204ENST00000372064 LRBAP50851 2863 aa16.51■□□□□ 0.23
VEGFA-204ENST00000372064 COX7A2P2O60397 106 aa16.5■□□□□ 0.23
VEGFA-204ENST00000372064 C10orf113Q5VZT2 155 aa16.5■□□□□ 0.23
VEGFA-204ENST00000372064 PRDM13Q9H4Q3 707 aa16.5■□□□□ 0.23
VEGFA-204ENST00000372064 SLC17A3O00476 420 aa16.5■□□□□ 0.23
VEGFA-204ENST00000372064 SUMO1P63165 101 aaKnown RBP16.5■□□□□ 0.23
VEGFA-204ENST00000372064 ETFRF1Q6IPR1 90 aa16.5■□□□□ 0.23
VEGFA-204ENST00000372064 HCP5Q6MZN7 132 aa16.5■□□□□ 0.23
VEGFA-204ENST00000372064 OR5AU1Q8NGC0 362 aa16.5■□□□□ 0.23
VEGFA-204ENST00000372064 SIGLEC9Q9Y336 463 aa16.5■□□□□ 0.23
VEGFA-204ENST00000372064 APELAP0DMC3 54 aa16.49■□□□□ 0.23
VEGFA-204ENST00000372064 MFAP2P55001 183 aa16.49■□□□□ 0.23
VEGFA-204ENST00000372064 BPIFB3P59826 476 aa16.49■□□□□ 0.23
VEGFA-204ENST00000372064 UBE2L3P68036 154 aaKnown RBP16.49■□□□□ 0.23
VEGFA-204ENST00000372064 IGF2BP2-AS1Q96M15 143 aa16.49■□□□□ 0.23
VEGFA-204ENST00000372064 ZNF355PQ9NSJ1 428 aa16.49■□□□□ 0.23
VEGFA-204ENST00000372064 RPL27AP46776 148 aaKnown RBP16.49■□□□□ 0.23
VEGFA-204ENST00000372064 COMPP49747 757 aaPredicted RBP16.49■□□□□ 0.23
VEGFA-204ENST00000372064 TNXAQ16473 311 aa16.49■□□□□ 0.23
VEGFA-204ENST00000372064 C19orf35Q6ZS72 473 aa16.49■□□□□ 0.23
VEGFA-204ENST00000372064 OR5I1Q13606 314 aa16.49■□□□□ 0.23
VEGFA-204ENST00000372064 LGALS4P56470 323 aa16.48■□□□□ 0.23
VEGFA-204ENST00000372064 ERVFC1-1P60608 527 aa16.48■□□□□ 0.23
VEGFA-204ENST00000372064 PAX2Q02962 417 aa16.48■□□□□ 0.23
VEGFA-204ENST00000372064 RUSC1-AS1Q66K80 236 aa16.48■□□□□ 0.23
VEGFA-204ENST00000372064 OR8B3Q8NGG8 313 aa16.48■□□□□ 0.23
VEGFA-204ENST00000372064 OR8B2Q96RD0 313 aa16.48■□□□□ 0.23
VEGFA-204ENST00000372064 C22orf46C9J442 243 aa16.48■□□□□ 0.23
VEGFA-204ENST00000372064 LY6LH3BQJ8 138 aa16.48■□□□□ 0.23
VEGFA-204ENST00000372064 GCGP01275 180 aa16.48■□□□□ 0.23
VEGFA-204ENST00000372064 IGLV2-8P01709 118 aa16.48■□□□□ 0.23
VEGFA-204ENST00000372064 LY6G5BQ8NDX9 201 aa16.48■□□□□ 0.23
VEGFA-204ENST00000372064 OR5R1Q8NH85 324 aa16.48■□□□□ 0.23
VEGFA-204ENST00000372064 DCHS2Q6V1P9 2916 aa16.48■□□□□ 0.23
VEGFA-204ENST00000372064 JOSD1Q15040 202 aaPredicted RBP16.47■□□□□ 0.23
VEGFA-204ENST00000372064 AMMECR1Q9Y4X0 333 aaPredicted RBP16.47■□□□□ 0.23
VEGFA-204ENST00000372064 RPEL1Q2QD12 228 aa16.47■□□□□ 0.23
VEGFA-204ENST00000372064 RPEQ96AT9 228 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms