RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 CCL3P10147 92 aa9.81□□□□□ -0.84
PTPN1-201ENST00000371621 MYOZ3Q8TDC0 251 aa9.81□□□□□ -0.84
PTPN1-201ENST00000371621 C20orf204Q6ZNR8 217 aa9.81□□□□□ -0.84
PTPN1-201ENST00000371621 OR4X2Q8NGF9 303 aa9.81□□□□□ -0.84
PTPN1-201ENST00000371621 SSC4DQ8WTU2 575 aa9.81□□□□□ -0.84
PTPN1-201ENST00000371621 PHF7Q9BWX1 381 aaPredicted RBP9.81□□□□□ -0.84
PTPN1-201ENST00000371621 A0A1W2PPM0 123 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 J3QT63 122 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 IGKV3-11P04433 115 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 CELA2AP08217 269 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 MRPS21P82921 87 aaKnown RBP9.8□□□□□ -0.84
PTPN1-201ENST00000371621 WFDC2Q14508 124 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 RPL39P5Q59GN2 51 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 GTSCR1Q86UQ5 136 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 FOXC2Q99958 501 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 SFXN3Q9BWM7 321 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 MRPL27Q9P0M9 148 aaKnown RBP9.8□□□□□ -0.84
PTPN1-201ENST00000371621 TRAV8-1A0A0A6YYK1 113 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 K7EN84 100 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 PEX7O00628 323 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 C2orf83Q53S99 150 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 HCP5Q6MZN7 132 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 INO80CQ6PI98 192 aaPredicted RBP9.8□□□□□ -0.84
PTPN1-201ENST00000371621 TMEM92Q6UXU6 159 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 TRGV10A0A0A0MS01 117 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 H3BRM9 83 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 NBEAP1P0C6P0 100 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 RPL30P62888 115 aaKnown RBP9.8□□□□□ -0.84
PTPN1-201ENST00000371621 PCSK4Q6UW60 755 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 C3orf56Q8N813 242 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 FAM168AQ92567 244 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 NPIPB3Q92617 1050 aa9.8□□□□□ -0.84
PTPN1-201ENST00000371621 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.79□□□□□ -0.84
PTPN1-201ENST00000371621 ETV2O00321 342 aaPredicted RBP9.79□□□□□ -0.84
PTPN1-201ENST00000371621 NTF4P34130 210 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 RAC3P60763 192 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 HERV-K104P63124 156 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 TMEM249Q2WGJ8 235 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 V9GYV3 84 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 PCDH15Q96QU1 1955 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 SPEGQ15772 3267 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 IGKV1-6A0A0C4DH72 117 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 J3KRW8 73 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 Q8IYB0 196 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 SPEM1Q8N4L4 309 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 ZIC4Q8N9L1 334 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 PRELID3AQ96N28 172 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 ASCL2Q99929 193 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 SLC25A33Q9BSK2 321 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 RAB9BQ9NP90 201 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 A0A1B0GUT8 65 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 NDUFA3O95167 84 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 CCL1P22362 96 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 CYB561P49447 251 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 FAM53AQ6NSI3 398 aaPredicted RBP9.79□□□□□ -0.84
PTPN1-201ENST00000371621 Q6ZS52 159 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 TUSC5Q8IXB3 177 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 ZBTB34Q8NCN2 500 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 OR10X1Q8NGY0 326 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 KCNE4Q8WWG9 221 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 ANAPC10Q9UM13 185 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 MPC1Q9Y5U8 109 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 EP300Q09472 2414 aaPredicted RBP9.79□□□□□ -0.84
PTPN1-201ENST00000371621 hCG_38984A0A1B0GV85 526 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 SPAARA0A1B0GVQ0 90 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 A0A1W2PPC4 97 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 C12orf77C9JDV5 145 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 WNT9BO14905 357 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 MOSP00540 346 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 REG1AP05451 166 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 MGST2Q99735 147 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 NPFFR1Q9GZQ6 430 aa9.79□□□□□ -0.84
PTPN1-201ENST00000371621 ABCA4P78363 2273 aa9.78□□□□□ -0.84
PTPN1-201ENST00000371621 C2CD3Q4AC94 2353 aa9.78□□□□□ -0.84
PTPN1-201ENST00000371621 LILRA5A6NI73 299 aa9.78□□□□□ -0.84
PTPN1-201ENST00000371621 EFNA2O43921 213 aa9.78□□□□□ -0.84
PTPN1-201ENST00000371621 OR9G1Q8NH87 305 aa9.78□□□□□ -0.84
PTPN1-201ENST00000371621 RPP21Q9H633 154 aaKnown RBP9.78□□□□□ -0.84
PTPN1-201ENST00000371621 TP53TG3Q9ULZ0 132 aa9.78□□□□□ -0.84
PTPN1-201ENST00000371621 PCNX2A6NKB5 2137 aa9.78□□□□□ -0.84
PTPN1-201ENST00000371621 MLNRO43193 412 aa9.78□□□□□ -0.84
PTPN1-201ENST00000371621 ZNF585BQ52M93 769 aa9.78□□□□□ -0.84
PTPN1-201ENST00000371621 LRRC29Q8WV35 223 aa9.78□□□□□ -0.84
PTPN1-201ENST00000371621 FCGR2BP31994 310 aaPredicted RBP9.78□□□□□ -0.84
PTPN1-201ENST00000371621 KIR2DL1P43626 348 aaPredicted RBP9.78□□□□□ -0.84
PTPN1-201ENST00000371621 KIR2DL2P43627 348 aaPredicted RBP9.78□□□□□ -0.84
PTPN1-201ENST00000371621 IGLV3-21P80748 117 aaPredicted RBP9.78□□□□□ -0.84
PTPN1-201ENST00000371621 MORN2Q502X0 79 aa9.78□□□□□ -0.84
PTPN1-201ENST00000371621 SF3B5Q9BWJ5 86 aaKnown RBP9.78□□□□□ -0.84
PTPN1-201ENST00000371621 IGHV3OR15-7A0A075B7D8 119 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 IGHV1-24A0A0C4DH33 117 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 M0R3E3 92 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 YPEL1O60688 119 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 IGKV1-39P01597 117 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 IGKV1D-39P04432 117 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 OR9G9P0C7N8 305 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 HSPE1P61604 102 aaKnown RBP9.77□□□□□ -0.85
PTPN1-201ENST00000371621 PSG7Q13046 419 aa9.77□□□□□ -0.85
PTPN1-201ENST00000371621 RBPMS2Q6ZRY4 209 aaKnown RBP9.77□□□□□ -0.85
PTPN1-201ENST00000371621 IFI27L1Q96BM0 104 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms