RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 INSIG2Q9Y5U4 225 aa23.28■■□□□ 1.32
SSBP3-204ENST00000371320 TRAV5A0A0B4J249 113 aa23.28■■□□□ 1.32
SSBP3-204ENST00000371320 A0A1W2PRE2 83 aa23.28■■□□□ 1.32
SSBP3-204ENST00000371320 TCRBV4S1A1TA0A5B7 111 aa23.28■■□□□ 1.32
SSBP3-204ENST00000371320 GGTLC3B5MD39 225 aa23.28■■□□□ 1.32
SSBP3-204ENST00000371320 COX7A2P2O60397 106 aa23.28■■□□□ 1.32
SSBP3-204ENST00000371320 MORN5Q5VZ52 161 aa23.28■■□□□ 1.32
SSBP3-204ENST00000371320 MRPL41Q8IXM3 137 aaKnown RBP23.28■■□□□ 1.32
SSBP3-204ENST00000371320 MMD2Q8IY49 270 aa23.28■■□□□ 1.32
SSBP3-204ENST00000371320 FAM167A-AS1Q96KT0 104 aa23.28■■□□□ 1.32
SSBP3-204ENST00000371320 FSTL3O95633 263 aa23.27■■□□□ 1.32
SSBP3-204ENST00000371320 SUMO1P63165 101 aaKnown RBP23.27■■□□□ 1.32
SSBP3-204ENST00000371320 PRSS8Q16651 343 aa23.27■■□□□ 1.32
SSBP3-204ENST00000371320 CENPWQ5EE01 88 aa23.27■■□□□ 1.32
SSBP3-204ENST00000371320 PFDN5Q99471 154 aa23.27■■□□□ 1.32
SSBP3-204ENST00000371320 PPIAL4CA0A0B4J2A2 164 aa23.26■■□□□ 1.31
SSBP3-204ENST00000371320 PPIAL4GP0DN37 164 aa23.26■■□□□ 1.31
SSBP3-204ENST00000371320 PDLIM4P50479 330 aa23.26■■□□□ 1.31
SSBP3-204ENST00000371320 ZNF90Q03938 601 aa23.26■■□□□ 1.31
SSBP3-204ENST00000371320 THAP8Q8NA92 274 aa23.26■■□□□ 1.31
SSBP3-204ENST00000371320 ST6GALNAC3Q8NDV1 305 aa23.26■■□□□ 1.31
SSBP3-204ENST00000371320 OR1L4Q8NGR5 311 aa23.26■■□□□ 1.31
SSBP3-204ENST00000371320 IL36BQ9NZH7 164 aa23.26■■□□□ 1.31
SSBP3-204ENST00000371320 IGKV1D-37A0A075B6S9 117 aa23.26■■□□□ 1.31
SSBP3-204ENST00000371320 IGLC7A0M8Q6 106 aa23.26■■□□□ 1.31
SSBP3-204ENST00000371320 BUB1B-PAK6H3BSN5 160 aa23.26■■□□□ 1.31
SSBP3-204ENST00000371320 SLC17A3O00476 420 aa23.26■■□□□ 1.31
SSBP3-204ENST00000371320 KLRB1Q12918 225 aa23.26■■□□□ 1.31
SSBP3-204ENST00000371320 C10orf113Q5VZT2 155 aa23.26■■□□□ 1.31
SSBP3-204ENST00000371320 IGHV1-3A0A0C4DH29 117 aa23.25■■□□□ 1.31
SSBP3-204ENST00000371320 CNTFRP26992 372 aa23.25■■□□□ 1.31
SSBP3-204ENST00000371320 UBE2L3P68036 154 aaKnown RBP23.25■■□□□ 1.31
SSBP3-204ENST00000371320 TNXAQ16473 311 aa23.25■■□□□ 1.31
SSBP3-204ENST00000371320 OR5AU1Q8NGC0 362 aa23.25■■□□□ 1.31
SSBP3-204ENST00000371320 MRPL36Q9P0J6 103 aaKnown RBP23.25■■□□□ 1.31
SSBP3-204ENST00000371320 AMBPP02760 352 aa23.24■■□□□ 1.31
SSBP3-204ENST00000371320 RPL27AP46776 148 aaKnown RBP23.24■■□□□ 1.31
SSBP3-204ENST00000371320 CNN1P51911 297 aaKnown RBP23.24■■□□□ 1.31
SSBP3-204ENST00000371320 SELENOTP62341 195 aa23.24■■□□□ 1.31
SSBP3-204ENST00000371320 HCP5Q6MZN7 132 aa23.24■■□□□ 1.31
SSBP3-204ENST00000371320 BEND2Q8NDZ0 799 aa23.24■■□□□ 1.31
SSBP3-204ENST00000371320 COX7A1P24310 79 aa23.24■■□□□ 1.31
SSBP3-204ENST00000371320 BPIFB3P59826 476 aa23.24■■□□□ 1.31
SSBP3-204ENST00000371320 ERVFC1-1P60608 527 aa23.24■■□□□ 1.31
SSBP3-204ENST00000371320 OR5I1Q13606 314 aa23.24■■□□□ 1.31
SSBP3-204ENST00000371320 ETFRF1Q6IPR1 90 aa23.24■■□□□ 1.31
SSBP3-204ENST00000371320 SPTA1P02549 2419 aa23.24■■□□□ 1.31
SSBP3-204ENST00000371320 RBP4P02753 201 aa23.23■■□□□ 1.31
SSBP3-204ENST00000371320 CRYGBP07316 175 aa23.23■■□□□ 1.31
SSBP3-204ENST00000371320 MISP3Q96FF7 219 aa23.23■■□□□ 1.31
SSBP3-204ENST00000371320 ZNF355PQ9NSJ1 428 aa23.23■■□□□ 1.31
SSBP3-204ENST00000371320 NAV3Q8IVL0 2385 aa23.23■■□□□ 1.31
SSBP3-204ENST00000371320 PATE2Q6UY27 113 aa23.23■■□□□ 1.31
SSBP3-204ENST00000371320 SIGLEC9Q9Y336 463 aa23.23■■□□□ 1.31
SSBP3-204ENST00000371320 MALRD1Q5VYJ5 2156 aa23.22■■□□□ 1.31
SSBP3-204ENST00000371320 TRAV9-1A0A075B6T8 112 aa23.22■■□□□ 1.31
SSBP3-204ENST00000371320 HIST1H1BP16401 226 aaKnown RBP23.22■■□□□ 1.31
SSBP3-204ENST00000371320 TIGITQ495A1 244 aa23.22■■□□□ 1.31
SSBP3-204ENST00000371320 DNLZQ5SXM8 178 aa23.22■■□□□ 1.31
SSBP3-204ENST00000371320 OR8B3Q8NGG8 313 aa23.22■■□□□ 1.31
SSBP3-204ENST00000371320 OR8B2Q96RD0 313 aa23.22■■□□□ 1.31
SSBP3-204ENST00000371320 CDSNQ15517 529 aa23.21■■□□□ 1.31
SSBP3-204ENST00000371320 ANKHD1Q8IWZ3 2542 aaKnown RBP23.21■■□□□ 1.31
SSBP3-204ENST00000371320 ADORA2A-AS1P86434 159 aa23.21■■□□□ 1.31
SSBP3-204ENST00000371320 RPEQ96AT9 228 aa23.21■■□□□ 1.31
SSBP3-204ENST00000371320 PAXXQ9BUH6 204 aa23.21■■□□□ 1.31
SSBP3-204ENST00000371320 AMMECR1Q9Y4X0 333 aaPredicted RBP23.21■■□□□ 1.31
SSBP3-204ENST00000371320 COMPP49747 757 aaPredicted RBP23.2■■□□□ 1.3
SSBP3-204ENST00000371320 PVRIGQ6DKI7 326 aa23.2■■□□□ 1.3
SSBP3-204ENST00000371320 C8orf46Q8TAG6 207 aa23.2■■□□□ 1.3
SSBP3-204ENST00000371320 RD3LP0DJH9 198 aa23.2■■□□□ 1.3
SSBP3-204ENST00000371320 APELAP0DMC3 54 aa23.2■■□□□ 1.3
SSBP3-204ENST00000371320 PYYP10082 97 aa23.2■■□□□ 1.3
SSBP3-204ENST00000371320 MFAP2P55001 183 aa23.2■■□□□ 1.3
SSBP3-204ENST00000371320 YPEL3P61236 119 aaPredicted RBP23.2■■□□□ 1.3
SSBP3-204ENST00000371320 RPEL1Q2QD12 228 aa23.2■■□□□ 1.3
SSBP3-204ENST00000371320 TNFRSF19Q9NS68 423 aa23.2■■□□□ 1.3
SSBP3-204ENST00000371320 V9GYV3 84 aa23.2■■□□□ 1.3
SSBP3-204ENST00000371320 CRYGCP07315 174 aa23.19■■□□□ 1.3
SSBP3-204ENST00000371320 ONECUT1Q9UBC0 465 aa23.19■■□□□ 1.3
SSBP3-204ENST00000371320 PPP1R27Q86WC6 154 aa23.18■■□□□ 1.3
SSBP3-204ENST00000371320 C22orf15Q8WYQ4 148 aa23.18■■□□□ 1.3
SSBP3-204ENST00000371320 RAB1BQ9H0U4 201 aa23.18■■□□□ 1.3
SSBP3-204ENST00000371320 C22orf46C9J442 243 aa23.18■■□□□ 1.3
SSBP3-204ENST00000371320 LGALS4P56470 323 aa23.17■■□□□ 1.3
SSBP3-204ENST00000371320 RUSC1-AS1Q66K80 236 aa23.17■■□□□ 1.3
SSBP3-204ENST00000371320 C19orf35Q6ZS72 473 aa23.17■■□□□ 1.3
SSBP3-204ENST00000371320 PRDM13Q9H4Q3 707 aa23.17■■□□□ 1.3
SSBP3-204ENST00000371320 PLXNB1O43157 2135 aa23.17■■□□□ 1.3
SSBP3-204ENST00000371320 MOSP00540 346 aa23.17■■□□□ 1.3
SSBP3-204ENST00000371320 LIPFP07098 398 aa23.17■■□□□ 1.3
SSBP3-204ENST00000371320 LINC00305Q7Z4B0 112 aa23.17■■□□□ 1.3
SSBP3-204ENST00000371320 IGF2RP11717 2491 aa23.16■■□□□ 1.3
SSBP3-204ENST00000371320 LY6HO94772 140 aa23.16■■□□□ 1.3
SSBP3-204ENST00000371320 IGF2BP2-AS1Q96M15 143 aa23.16■■□□□ 1.3
SSBP3-204ENST00000371320 GCGP01275 180 aa23.15■■□□□ 1.3
SSBP3-204ENST00000371320 ADMP35318 185 aa23.15■■□□□ 1.3
SSBP3-204ENST00000371320 JOSD1Q15040 202 aaPredicted RBP23.15■■□□□ 1.3
SSBP3-204ENST00000371320 TMEM18Q96B42 140 aa23.15■■□□□ 1.3
SSBP3-204ENST00000371320 TRGV9Q99603 122 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms