RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 EFEMP2O95967 443 aa14.28□□□□□ -0.12
PTP4A1-201ENST00000370651 ZNF56Q15929 161 aa14.28□□□□□ -0.12
PTP4A1-201ENST00000370651 OR4X2Q8NGF9 303 aa14.28□□□□□ -0.12
PTP4A1-201ENST00000370651 MEGF9Q9H1U4 602 aa14.28□□□□□ -0.12
PTP4A1-201ENST00000370651 C9JQL5 133 aa14.28□□□□□ -0.12
PTP4A1-201ENST00000370651 TMEM14EPQ6UXP3 125 aa14.28□□□□□ -0.12
PTP4A1-201ENST00000370651 TSKUQ8WUA8 353 aa14.28□□□□□ -0.12
PTP4A1-201ENST00000370651 AGMATQ9BSE5 352 aa14.28□□□□□ -0.12
PTP4A1-201ENST00000370651 ST20Q9HBF5 79 aa14.28□□□□□ -0.12
PTP4A1-201ENST00000370651 IGKV1-5P01602 117 aa14.27□□□□□ -0.12
PTP4A1-201ENST00000370651 FDCSPQ8NFU4 85 aa14.27□□□□□ -0.12
PTP4A1-201ENST00000370651 C21orf62Q9NYP8 219 aa14.27□□□□□ -0.12
PTP4A1-201ENST00000370651 ZNF257Q9Y2Q1 563 aa14.27□□□□□ -0.12
PTP4A1-201ENST00000370651 PRCDQ00LT1 54 aa14.27□□□□□ -0.13
PTP4A1-201ENST00000370651 FAM159AQ6UWV7 190 aa14.27□□□□□ -0.13
PTP4A1-201ENST00000370651 E9PQ18 207 aa14.27□□□□□ -0.13
PTP4A1-201ENST00000370651 TCRBV4S1A1TA0A5B7 111 aa14.26□□□□□ -0.13
PTP4A1-201ENST00000370651 FAM106AQ4KMX7 169 aa14.26□□□□□ -0.13
PTP4A1-201ENST00000370651 SAMD13Q5VXD3 122 aa14.26□□□□□ -0.13
PTP4A1-201ENST00000370651 PNRC2Q9NPJ4 139 aaKnown RBP14.26□□□□□ -0.13
PTP4A1-201ENST00000370651 C5orf63A6NC05 138 aa14.26□□□□□ -0.13
PTP4A1-201ENST00000370651 TFF1P04155 84 aa14.26□□□□□ -0.13
PTP4A1-201ENST00000370651 ZNF664Q8N3J9 261 aa14.26□□□□□ -0.13
PTP4A1-201ENST00000370651 CHCHD1Q96BP2 118 aaKnown RBP14.26□□□□□ -0.13
PTP4A1-201ENST00000370651 DPM3Q9P2X0 92 aa14.26□□□□□ -0.13
PTP4A1-201ENST00000370651 PPP1R17O96001 155 aa14.26□□□□□ -0.13
PTP4A1-201ENST00000370651 TYMSP04818 313 aa14.26□□□□□ -0.13
PTP4A1-201ENST00000370651 HBDP02042 147 aa14.26□□□□□ -0.13
PTP4A1-201ENST00000370651 DDB2Q92466 427 aa14.26□□□□□ -0.13
PTP4A1-201ENST00000370651 ELOVL5Q9NYP7 299 aa14.26□□□□□ -0.13
PTP4A1-201ENST00000370651 B9A039 149 aa14.25□□□□□ -0.13
PTP4A1-201ENST00000370651 C9JCJ5 164 aa14.25□□□□□ -0.13
PTP4A1-201ENST00000370651 IGHV3-23P01764 117 aa14.25□□□□□ -0.13
PTP4A1-201ENST00000370651 GEMIN7Q9H840 131 aaKnown RBP14.25□□□□□ -0.13
PTP4A1-201ENST00000370651 NHP2Q9NX24 153 aaKnown RBP14.25□□□□□ -0.13
PTP4A1-201ENST00000370651 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.25□□□□□ -0.13
PTP4A1-201ENST00000370651 FAM27E3Q08E93 113 aa14.25□□□□□ -0.13
PTP4A1-201ENST00000370651 ATP5L2Q7Z4Y8 100 aa14.25□□□□□ -0.13
PTP4A1-201ENST00000370651 ORAOV1Q8WV07 137 aa14.25□□□□□ -0.13
PTP4A1-201ENST00000370651 COPS9Q8WXC6 57 aa14.25□□□□□ -0.13
PTP4A1-201ENST00000370651 APOMO95445 188 aa14.25□□□□□ -0.13
PTP4A1-201ENST00000370651 TSPOP30536 169 aa14.25□□□□□ -0.13
PTP4A1-201ENST00000370651 FHL1Q13642 323 aa14.25□□□□□ -0.13
PTP4A1-201ENST00000370651 IGHV3-49A0A0A0MS15 119 aa14.25□□□□□ -0.13
PTP4A1-201ENST00000370651 GZMBP10144 247 aa14.25□□□□□ -0.13
PTP4A1-201ENST00000370651 CCL3L1P16619 93 aa14.24□□□□□ -0.13
PTP4A1-201ENST00000370651 LEPP41159 167 aa14.24□□□□□ -0.13
PTP4A1-201ENST00000370651 FAM90A2PQ658T7 463 aa14.24□□□□□ -0.13
PTP4A1-201ENST00000370651 CFPP27918 469 aa14.24□□□□□ -0.13
PTP4A1-201ENST00000370651 OR2K2Q8NGT1 345 aa14.24□□□□□ -0.13
PTP4A1-201ENST00000370651 FBXL7Q9UJT9 491 aa14.24□□□□□ -0.13
PTP4A1-201ENST00000370651 CLPSP04118 112 aa14.24□□□□□ -0.13
PTP4A1-201ENST00000370651 ASIPP42127 132 aa14.24□□□□□ -0.13
PTP4A1-201ENST00000370651 TRIOBPQ9H2D6 2365 aa14.24□□□□□ -0.13
PTP4A1-201ENST00000370651 CACNG7P62955 275 aa14.23□□□□□ -0.13
PTP4A1-201ENST00000370651 SEC11AP67812 179 aa14.23□□□□□ -0.13
PTP4A1-201ENST00000370651 FOXF2Q12947 444 aa14.23□□□□□ -0.13
PTP4A1-201ENST00000370651 MEIG1Q5JSS6 88 aa14.23□□□□□ -0.13
PTP4A1-201ENST00000370651 SIP14410 1827 aa14.23□□□□□ -0.13
PTP4A1-201ENST00000370651 SPATA31B1PQ5VZV4 182 aa14.23□□□□□ -0.13
PTP4A1-201ENST00000370651 NUDT10Q8NFP7 164 aa14.23□□□□□ -0.13
PTP4A1-201ENST00000370651 NUDT11Q96G61 164 aa14.23□□□□□ -0.13
PTP4A1-201ENST00000370651 NDUFA3O95167 84 aa14.23□□□□□ -0.13
PTP4A1-201ENST00000370651 SPSB3Q6PJ21 355 aa14.23□□□□□ -0.13
PTP4A1-201ENST00000370651 OR5A1Q8NGJ0 315 aa14.23□□□□□ -0.13
PTP4A1-201ENST00000370651 SBF1O95248 1867 aa14.23□□□□□ -0.13
PTP4A1-201ENST00000370651 SPTBN1Q01082 2364 aaKnown RBP14.23□□□□□ -0.13
PTP4A1-201ENST00000370651 IGHV3-66A0A0C4DH42 116 aa14.23□□□□□ -0.13
PTP4A1-201ENST00000370651 IGKV1D-33P01593 117 aa14.22□□□□□ -0.13
PTP4A1-201ENST00000370651 IGKV1-33P01594 117 aa14.22□□□□□ -0.13
PTP4A1-201ENST00000370651 SFTPCP11686 197 aa14.22□□□□□ -0.13
PTP4A1-201ENST00000370651 UBE2L6O14933 153 aa14.22□□□□□ -0.13
PTP4A1-201ENST00000370651 LTBP1Q14766 1721 aa14.22□□□□□ -0.13
PTP4A1-201ENST00000370651 C5orf24Q7Z6I8 188 aa14.22□□□□□ -0.13
PTP4A1-201ENST00000370651 MS4A6AQ9H2W1 248 aa14.22□□□□□ -0.13
PTP4A1-201ENST00000370651 PSG8Q9UQ74 426 aa14.22□□□□□ -0.13
PTP4A1-201ENST00000370651 FAM181BA6NEQ2 426 aa14.22□□□□□ -0.13
PTP4A1-201ENST00000370651 FABP5P3A8MUU1 101 aa14.22□□□□□ -0.13
PTP4A1-201ENST00000370651 CFHR1Q03591 330 aa14.22□□□□□ -0.13
PTP4A1-201ENST00000370651 SEPSECSQ9HD40 501 aaKnown RBP14.22□□□□□ -0.13
PTP4A1-201ENST00000370651 CNOT1A5YKK6 2376 aaKnown RBP14.22□□□□□ -0.13
PTP4A1-201ENST00000370651 IGHV3OR16-8A0A075B7F1 116 aa14.21□□□□□ -0.13
PTP4A1-201ENST00000370651 TRAV5A0A0B4J249 113 aa14.21□□□□□ -0.13
PTP4A1-201ENST00000370651 TMEM50AO95807 157 aa14.21□□□□□ -0.13
PTP4A1-201ENST00000370651 ARTNQ5T4W7 220 aa14.21□□□□□ -0.13
PTP4A1-201ENST00000370651 TMEM42Q69YG0 159 aa14.21□□□□□ -0.13
PTP4A1-201ENST00000370651 APOBEC3AP31941 199 aaPredicted RBP14.21□□□□□ -0.13
PTP4A1-201ENST00000370651 COQ2Q96H96 371 aa14.21□□□□□ -0.13
PTP4A1-201ENST00000370651 BRWD3Q6RI45 1802 aa14.21□□□□□ -0.13
PTP4A1-201ENST00000370651 XIRP1Q702N8 1843 aaKnown RBP14.21□□□□□ -0.13
PTP4A1-201ENST00000370651 FOXG1P55316 489 aaPredicted RBP14.21□□□□□ -0.13
PTP4A1-201ENST00000370651 CLEC2AQ6UVW9 174 aa14.21□□□□□ -0.13
PTP4A1-201ENST00000370651 C9orf106Q8NAJ2 232 aa14.21□□□□□ -0.14
PTP4A1-201ENST00000370651 OR5AN1Q8NGI8 311 aa14.21□□□□□ -0.14
PTP4A1-201ENST00000370651 MGST2Q99735 147 aa14.21□□□□□ -0.14
PTP4A1-201ENST00000370651 CRIM1Q9NZV1 1036 aa14.2□□□□□ -0.14
PTP4A1-201ENST00000370651 ZNF581Q9P0T4 197 aa14.2□□□□□ -0.14
PTP4A1-201ENST00000370651 C3orf79P0CE67 100 aa14.2□□□□□ -0.14
PTP4A1-201ENST00000370651 CD33P20138 364 aa14.2□□□□□ -0.14
PTP4A1-201ENST00000370651 HSD52Q0P140 79 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms