RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 IGKV1D-8A0A087WSZ0 117 aa8.71□□□□□ -1.02
PRDM1-201ENST00000369089 A0A1W2PNR3 127 aa8.71□□□□□ -1.02
PRDM1-201ENST00000369089 FOXF1Q12946 379 aa8.71□□□□□ -1.02
PRDM1-201ENST00000369089 PRR31Q5SQ13 230 aa8.71□□□□□ -1.02
PRDM1-201ENST00000369089 PPP1R32Q7Z5V6 425 aa8.71□□□□□ -1.02
PRDM1-201ENST00000369089 GTSCR1Q86UQ5 136 aa8.71□□□□□ -1.02
PRDM1-201ENST00000369089 MOGAT3Q86VF5 341 aa8.71□□□□□ -1.02
PRDM1-201ENST00000369089 MRPL32Q9BYC8 188 aaKnown RBP8.71□□□□□ -1.02
PRDM1-201ENST00000369089 HIGD1AQ9Y241 93 aa8.71□□□□□ -1.02
PRDM1-201ENST00000369089 BRCA1P38398 1863 aaKnown RBP8.71□□□□□ -1.02
PRDM1-201ENST00000369089 IGHV1OR15-9A0A0B4J2B8 117 aa8.71□□□□□ -1.02
PRDM1-201ENST00000369089 CELA2BP08218 269 aaPredicted RBP8.71□□□□□ -1.02
PRDM1-201ENST00000369089 CELA3BP08861 270 aa8.71□□□□□ -1.02
PRDM1-201ENST00000369089 MOB3BQ86TA1 216 aa8.71□□□□□ -1.02
PRDM1-201ENST00000369089 COQ2Q96H96 371 aa8.71□□□□□ -1.02
PRDM1-201ENST00000369089 TPRP12270 2363 aaKnown RBP8.7□□□□□ -1.02
PRDM1-201ENST00000369089 SMIM9A6NGZ8 99 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 GGTLC3B5MD39 225 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 CLDN14O95500 239 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 NMSQ5H8A3 153 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 C1QL2Q7Z5L3 287 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 Q8IYB0 196 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 MAFAQ8NHW3 353 aaPredicted RBP8.7□□□□□ -1.02
PRDM1-201ENST00000369089 MRPL33O75394 65 aaKnown RBP8.7□□□□□ -1.02
PRDM1-201ENST00000369089 SSC4DQ8WTU2 575 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 ZNF501Q96CX3 271 aaPredicted RBP8.7□□□□□ -1.02
PRDM1-201ENST00000369089 TNFRSF18Q9Y5U5 241 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 IGHV5-51A0A0C4DH38 117 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 IGLL5B9A064 214 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 CFHR2P36980 270 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 SPATA31B1PQ5VZV4 182 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 NUP37Q8NFH4 326 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 RND1Q92730 232 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 SNRNP40Q96DI7 357 aaKnown RBP8.7□□□□□ -1.02
PRDM1-201ENST00000369089 SCRT1Q9BWW7 348 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 FAM60AQ9NP50 221 aa8.7□□□□□ -1.02
PRDM1-201ENST00000369089 TAL2Q16559 108 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 VWC2Q2TAL6 325 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 C2orf82Q6UX34 121 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 CEND1Q8N111 149 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 C3orf56Q8N813 242 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 SLC25A10Q9UBX3 287 aaPredicted RBP8.69□□□□□ -1.02
PRDM1-201ENST00000369089 ASXL3Q9C0F0 2248 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 PRSS2P07478 247 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 ATXN8Q156A1 80 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 RRN3P1Q2M238 152 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 NRN1LQ496H8 165 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 C2orf83Q53S99 150 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 Q6AWC8 147 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 SPATA12Q7Z6I5 190 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 TEN1Q86WV5 123 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 WDR83OSQ9Y284 106 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 SCN3AQ9NY46 2000 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 MOSP00540 346 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 SPACA3Q8IXA5 215 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 SMRP1Q8NCR6 262 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 C1orf162Q8NEQ5 155 aaPredicted RBP8.69□□□□□ -1.02
PRDM1-201ENST00000369089 VSTM2LQ96N03 204 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 LOC101059948A0A1B0GTJ6 334 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 NDUFA3O95167 84 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 MEOX1P50221 254 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 PSG4Q00888 419 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 GCSAMQ8N6F7 178 aa8.69□□□□□ -1.02
PRDM1-201ENST00000369089 APC2O95996 2303 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 LOC285556D6RIA3 1793 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 GRPP07492 148 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 ZNF658BQ4V348 819 aaPredicted RBP8.68□□□□□ -1.02
PRDM1-201ENST00000369089 LINC00596Q86U02 117 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 MRAPQ8TCY5 172 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 DEPPQ9NTK1 212 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 DOCK8Q8NF50 2099 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 IGHV1OR21-1A0A087WYE8 117 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 A0A1W2PPV9 198 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 C12orf74Q32Q52 190 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 PRADC1Q9BSG0 188 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 H3BMM0 161 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 LGALS9BQ3B8N2 356 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 LGALS9CQ6DKI2 356 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 CIARTQ8N365 385 aaPredicted RBP8.68□□□□□ -1.02
PRDM1-201ENST00000369089 UBE2WQ96B02 151 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 V9GYV3 84 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 DOCK11Q5JSL3 2073 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 IGKV1D-42A0A075B6H8 117 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 A0A1W2PPI3 338 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 NDUFC2O95298 119 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 LEPP41159 167 aa8.68□□□□□ -1.02
PRDM1-201ENST00000369089 CNOT1A5YKK6 2376 aaKnown RBP8.67□□□□□ -1.02
PRDM1-201ENST00000369089 ORM1P02763 201 aa8.67□□□□□ -1.02
PRDM1-201ENST00000369089 ZNF138P52744 262 aa8.67□□□□□ -1.02
PRDM1-201ENST00000369089 HOXA4Q00056 320 aaPredicted RBP8.67□□□□□ -1.02
PRDM1-201ENST00000369089 ZFP36L1Q07352 338 aaKnown RBP8.67□□□□□ -1.02
PRDM1-201ENST00000369089 MIR17HGQ75NE6 70 aa8.67□□□□□ -1.02
PRDM1-201ENST00000369089 ZNF114Q8NC26 417 aa8.67□□□□□ -1.02
PRDM1-201ENST00000369089 TRAV25A0A0B4J276 109 aa8.67□□□□□ -1.02
PRDM1-201ENST00000369089 ZNF815PA8K554 130 aa8.67□□□□□ -1.02
PRDM1-201ENST00000369089 NPFFO15130 113 aa8.67□□□□□ -1.02
PRDM1-201ENST00000369089 NXPH1P58417 271 aa8.67□□□□□ -1.02
PRDM1-201ENST00000369089 ZC2HC1BQ5TFG8 222 aa8.67□□□□□ -1.02
PRDM1-201ENST00000369089 ALPK2Q86TB3 2170 aa8.67□□□□□ -1.02
PRDM1-201ENST00000369089 HEATR5AQ86XA9 2040 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms