RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 SPANXN2Q5MJ10 180 aa14.16□□□□□ -0.14
CKS1B-203ENST00000368439 RBPMS2Q6ZRY4 209 aaKnown RBP14.16□□□□□ -0.14
CKS1B-203ENST00000368439 OR52B4Q8NGK2 314 aa14.16□□□□□ -0.14
CKS1B-203ENST00000368439 SDHCQ99643 169 aaPredicted RBP14.16□□□□□ -0.14
CKS1B-203ENST00000368439 SRD5A3Q9H8P0 318 aa14.16□□□□□ -0.14
CKS1B-203ENST00000368439 SMPXQ9UHP9 88 aa14.16□□□□□ -0.14
CKS1B-203ENST00000368439 RYR3Q15413 4870 aa14.16□□□□□ -0.14
CKS1B-203ENST00000368439 IGHV7-4-1A0A0J9YVY3 117 aa14.15□□□□□ -0.14
CKS1B-203ENST00000368439 SULT1A3P0DMM9 295 aa14.15□□□□□ -0.14
CKS1B-203ENST00000368439 SULT1A4P0DMN0 295 aa14.15□□□□□ -0.14
CKS1B-203ENST00000368439 HTR2BP41595 481 aa14.15□□□□□ -0.14
CKS1B-203ENST00000368439 TMEM128Q5BJH2 165 aa14.15□□□□□ -0.14
CKS1B-203ENST00000368439 SLC16A13Q7RTY0 426 aa14.15□□□□□ -0.14
CKS1B-203ENST00000368439 SPAG8Q99932 426 aaPredicted RBP14.15□□□□□ -0.14
CKS1B-203ENST00000368439 SLC25A21Q9BQT8 299 aaPredicted RBP14.15□□□□□ -0.14
CKS1B-203ENST00000368439 SPATA25Q9BR10 227 aa14.15□□□□□ -0.14
CKS1B-203ENST00000368439 CHEK1O14757 476 aa14.14□□□□□ -0.15
CKS1B-203ENST00000368439 SRPXP78539 464 aa14.14□□□□□ -0.15
CKS1B-203ENST00000368439 ANKRD55Q3KP44 614 aa14.14□□□□□ -0.15
CKS1B-203ENST00000368439 C2orf83Q53S99 150 aa14.14□□□□□ -0.15
CKS1B-203ENST00000368439 TOMM20LQ6UXN7 152 aa14.14□□□□□ -0.15
CKS1B-203ENST00000368439 TMED4Q7Z7H5 227 aa14.14□□□□□ -0.15
CKS1B-203ENST00000368439 LGI3Q8N145 548 aa14.14□□□□□ -0.15
CKS1B-203ENST00000368439 OR4X1Q8NH49 305 aa14.14□□□□□ -0.15
CKS1B-203ENST00000368439 ZFAND3Q9H8U3 227 aa14.14□□□□□ -0.15
CKS1B-203ENST00000368439 HEYLQ9NQ87 328 aaPredicted RBP14.14□□□□□ -0.15
CKS1B-203ENST00000368439 HSPB7Q9UBY9 170 aa14.14□□□□□ -0.15
CKS1B-203ENST00000368439 CLN5O75503 358 aa14.13□□□□□ -0.15
CKS1B-203ENST00000368439 YIF1AO95070 293 aa14.13□□□□□ -0.15
CKS1B-203ENST00000368439 NXPH3O95157 252 aa14.13□□□□□ -0.15
CKS1B-203ENST00000368439 ANXA3P12429 323 aa14.13□□□□□ -0.15
CKS1B-203ENST00000368439 OPRK1P41145 380 aa14.13□□□□□ -0.15
CKS1B-203ENST00000368439 CCR6P51684 374 aa14.13□□□□□ -0.15
CKS1B-203ENST00000368439 SMCO1Q147U7 214 aa14.13□□□□□ -0.15
CKS1B-203ENST00000368439 LRTM2Q8N967 370 aa14.13□□□□□ -0.15
CKS1B-203ENST00000368439 CITED4Q96RK1 184 aa14.13□□□□□ -0.15
CKS1B-203ENST00000368439 RNF2Q99496 336 aa14.13□□□□□ -0.15
CKS1B-203ENST00000368439 RHPN1-AS1Q9BWJ2 59 aa14.13□□□□□ -0.15
CKS1B-203ENST00000368439 HIPK2Q9H2X6 1198 aa14.13□□□□□ -0.15
CKS1B-203ENST00000368439 STARD9Q9P2P6 4700 aa14.13□□□□□ -0.15
CKS1B-203ENST00000368439 TRAV14DV4A0A0A6YYC5 116 aa14.12□□□□□ -0.15
CKS1B-203ENST00000368439 A0A1B0GU03 582 aa14.12□□□□□ -0.15
CKS1B-203ENST00000368439 CEBPZOSA8MTT3 80 aa14.12□□□□□ -0.15
CKS1B-203ENST00000368439 TNFRSF9Q07011 255 aa14.12□□□□□ -0.15
CKS1B-203ENST00000368439 LAMTOR1Q6IAA8 161 aa14.12□□□□□ -0.15
CKS1B-203ENST00000368439 ZNF600Q6ZNG1 722 aa14.12□□□□□ -0.15
CKS1B-203ENST00000368439 TMEM116Q8NCL8 245 aa14.12□□□□□ -0.15
CKS1B-203ENST00000368439 SLC24A4Q8NFF2 622 aa14.12□□□□□ -0.15
CKS1B-203ENST00000368439 EDA2RQ9HAV5 297 aa14.12□□□□□ -0.15
CKS1B-203ENST00000368439 CACFD1Q9UGQ2 172 aa14.12□□□□□ -0.15
CKS1B-203ENST00000368439 IGHV3-49A0A0A0MS15 119 aa14.11□□□□□ -0.15
CKS1B-203ENST00000368439 DUXBA0A1W2PPF3 345 aa14.11□□□□□ -0.15
CKS1B-203ENST00000368439 PITX3O75364 302 aa14.11□□□□□ -0.15
CKS1B-203ENST00000368439 SFT2D2O95562 160 aa14.11□□□□□ -0.15
CKS1B-203ENST00000368439 PPP1R1AQ13522 171 aa14.11□□□□□ -0.15
CKS1B-203ENST00000368439 FAM90A2PQ658T7 463 aa14.11□□□□□ -0.15
CKS1B-203ENST00000368439 RNASEH2CQ8TDP1 164 aaKnown RBP14.11□□□□□ -0.15
CKS1B-203ENST00000368439 RETNQ9HD89 108 aa14.11□□□□□ -0.15
CKS1B-203ENST00000368439 NDUFA13Q9P0J0 144 aa14.11□□□□□ -0.15
CKS1B-203ENST00000368439 PUS1Q9Y606 427 aaKnown RBP eCLIP14.11□□□□□ -0.15
CKS1B-203ENST00000368439 DYNC2H1Q8NCM8 4307 aaKnown RBP14.1□□□□□ -0.15
CKS1B-203ENST00000368439 IGKV1-17P01599 117 aa14.1□□□□□ -0.15
CKS1B-203ENST00000368439 APOHP02749 345 aaPredicted RBP14.1□□□□□ -0.15
CKS1B-203ENST00000368439 RBMS2Q15434 407 aaKnown RBP14.1□□□□□ -0.15
CKS1B-203ENST00000368439 ODF3L2Q3SX64 289 aa14.1□□□□□ -0.15
CKS1B-203ENST00000368439 PRSS54Q6PEW0 395 aa14.1□□□□□ -0.15
CKS1B-203ENST00000368439 RBKSQ9H477 322 aa14.1□□□□□ -0.15
CKS1B-203ENST00000368439 VSIRQ9H7M9 311 aa14.1□□□□□ -0.15
CKS1B-203ENST00000368439 CSMD3Q7Z407 3707 aa14.1□□□□□ -0.15
CKS1B-203ENST00000368439 IGHV3OR16-13A0A075B7E8 117 aa14.09□□□□□ -0.15
CKS1B-203ENST00000368439 IGHV3-74A0A0B4J1X5 117 aa14.09□□□□□ -0.15
CKS1B-203ENST00000368439 C3orf84H3BNL1 204 aa14.09□□□□□ -0.15
CKS1B-203ENST00000368439 VAMP1P23763 118 aa14.09□□□□□ -0.15
CKS1B-203ENST00000368439 NPY1RP25929 384 aa14.09□□□□□ -0.15
CKS1B-203ENST00000368439 CENPSQ8N2Z9 138 aa14.09□□□□□ -0.15
CKS1B-203ENST00000368439 LILRB2Q8N423 598 aa14.09□□□□□ -0.15
CKS1B-203ENST00000368439 MUC7Q8TAX7 377 aa14.09□□□□□ -0.15
CKS1B-203ENST00000368439 DTD1Q8TEA8 209 aa14.09□□□□□ -0.15
CKS1B-203ENST00000368439 GINS3Q9BRX5 216 aa14.09□□□□□ -0.15
CKS1B-203ENST00000368439 UBQLN2Q9UHD9 624 aa14.09□□□□□ -0.15
CKS1B-203ENST00000368439 RPS10-NUDT3A0A1W2PQS6 291 aa14.08□□□□□ -0.16
CKS1B-203ENST00000368439 NAP1L6A6NFF2 107 aa14.08□□□□□ -0.16
CKS1B-203ENST00000368439 NDUFB6O95139 128 aa14.08□□□□□ -0.16
CKS1B-203ENST00000368439 IGLC1P0CG04 106 aa14.08□□□□□ -0.16
CKS1B-203ENST00000368439 BTCP35070 178 aa14.08□□□□□ -0.16
CKS1B-203ENST00000368439 TIGITQ495A1 244 aa14.08□□□□□ -0.16
CKS1B-203ENST00000368439 TRIQKQ629K1 86 aa14.08□□□□□ -0.16
CKS1B-203ENST00000368439 ST8SIA2Q92186 375 aa14.08□□□□□ -0.16
CKS1B-203ENST00000368439 FAM110AQ9BQ89 295 aa14.08□□□□□ -0.16
CKS1B-203ENST00000368439 U3KQ87 197 aa14.08□□□□□ -0.16
CKS1B-203ENST00000368439 TRAV30A0A087WSZ9 112 aa14.07□□□□□ -0.16
CKS1B-203ENST00000368439 PIGBOS1A0A0B4J2F0 54 aa14.07□□□□□ -0.16
CKS1B-203ENST00000368439 OR4C46A6NHA9 309 aa14.07□□□□□ -0.16
CKS1B-203ENST00000368439 SLC25A4P12235 298 aa14.07□□□□□ -0.16
CKS1B-203ENST00000368439 SLC25A6P12236 298 aa14.07□□□□□ -0.16
CKS1B-203ENST00000368439 RND2P52198 227 aa14.07□□□□□ -0.16
CKS1B-203ENST00000368439 OR1S1Q8NH92 325 aa14.07□□□□□ -0.16
CKS1B-203ENST00000368439 LOC102724200A0A096LPH7 203 aaPredicted RBP14.06□□□□□ -0.16
CKS1B-203ENST00000368439 IL7P13232 177 aa14.06□□□□□ -0.16
CKS1B-203ENST00000368439 INPP1P49441 399 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms