RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 MZT2AQ6P582 158 aa11.68□□□□□ -0.54
CKS1B-202ENST00000368436 OR4X1Q8NH49 305 aa11.68□□□□□ -0.54
CKS1B-202ENST00000368436 OR52I2Q8NH67 350 aa11.68□□□□□ -0.54
CKS1B-202ENST00000368436 PDCD10Q9BUL8 212 aa11.68□□□□□ -0.54
CKS1B-202ENST00000368436 FBXL17Q9UF56 701 aa11.68□□□□□ -0.54
CKS1B-202ENST00000368436 AGRNO00468 2067 aa11.67□□□□□ -0.54
CKS1B-202ENST00000368436 A0A0G2JRQ6 117 aa11.67□□□□□ -0.54
CKS1B-202ENST00000368436 A0A1W2PS18 150 aa11.67□□□□□ -0.54
CKS1B-202ENST00000368436 FAM25AB3EWG3 89 aa11.67□□□□□ -0.54
CKS1B-202ENST00000368436 FAM25CB3EWG5 89 aa11.67□□□□□ -0.54
CKS1B-202ENST00000368436 FAM25GB3EWG6 89 aa11.67□□□□□ -0.54
CKS1B-202ENST00000368436 K7EQG2 157 aa11.67□□□□□ -0.54
CKS1B-202ENST00000368436 UCP1P25874 307 aa11.67□□□□□ -0.54
CKS1B-202ENST00000368436 TCTAP57738 103 aa11.67□□□□□ -0.54
CKS1B-202ENST00000368436 MLANAQ16655 118 aa11.67□□□□□ -0.54
CKS1B-202ENST00000368436 SP6Q3SY56 376 aa11.67□□□□□ -0.54
CKS1B-202ENST00000368436 RNASE12Q5GAN4 147 aaKnown RBP11.67□□□□□ -0.54
CKS1B-202ENST00000368436 TERB2Q8NHR7 220 aa11.67□□□□□ -0.54
CKS1B-202ENST00000368436 ABHD1Q96SE0 405 aa11.67□□□□□ -0.54
CKS1B-202ENST00000368436 VPS13DQ5THJ4 4388 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 DEFB4AO15263 64 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 CD74P04233 296 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 GIG44P09565 113 aaPredicted RBP11.66□□□□□ -0.54
CKS1B-202ENST00000368436 TRIM16LQ309B1 348 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 AARDQ4LEZ3 155 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 Q6ZRM9 215 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 TRPT1Q86TN4 253 aaKnown RBP11.66□□□□□ -0.54
CKS1B-202ENST00000368436 STHQ8IWL8 128 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 CCDC71LQ8N9Z2 235 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 Q8NAQ8 132 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 OR4D10Q8NGI6 311 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 ZFAND1Q8TCF1 268 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 C2CD4CQ8TF44 421 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 AP3S1Q92572 193 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 GRAMD2BQ96HH9 432 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 METTL26Q96S19 204 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 COPZ2Q9P299 210 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 EXTL2Q9UBQ6 330 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 RABAC1Q9UI14 185 aa11.66□□□□□ -0.54
CKS1B-202ENST00000368436 TRAV30A0A087WSZ9 112 aa11.65□□□□□ -0.54
CKS1B-202ENST00000368436 B3GALNT1O75752 331 aa11.65□□□□□ -0.54
CKS1B-202ENST00000368436 IGKV1-17P01599 117 aa11.65□□□□□ -0.54
CKS1B-202ENST00000368436 OPRK1P41145 380 aa11.65□□□□□ -0.54
CKS1B-202ENST00000368436 HOXA1P49639 335 aaPredicted RBP11.65□□□□□ -0.54
CKS1B-202ENST00000368436 PPP5CP53041 499 aa11.65□□□□□ -0.54
CKS1B-202ENST00000368436 TMEM41BQ5BJD5 291 aa11.65□□□□□ -0.54
CKS1B-202ENST00000368436 TMEM229BQ8NBD8 167 aa11.65□□□□□ -0.54
CKS1B-202ENST00000368436 OR13C8Q8NGS7 320 aa11.65□□□□□ -0.54
CKS1B-202ENST00000368436 TMEM230Q96A57 120 aa11.65□□□□□ -0.54
CKS1B-202ENST00000368436 RRNAD1Q96FB5 475 aaKnown RBP11.65□□□□□ -0.54
CKS1B-202ENST00000368436 HRH4Q9H3N8 390 aa11.65□□□□□ -0.54
CKS1B-202ENST00000368436 ENY2Q9NPA8 101 aa11.65□□□□□ -0.54
CKS1B-202ENST00000368436 CDS2O95674 445 aa11.64□□□□□ -0.55
CKS1B-202ENST00000368436 SPP1P10451 314 aa11.64□□□□□ -0.55
CKS1B-202ENST00000368436 ZNF182P17025 639 aaPredicted RBP11.64□□□□□ -0.55
CKS1B-202ENST00000368436 P2RY1P47900 373 aa11.64□□□□□ -0.55
CKS1B-202ENST00000368436 TAS2R19P59542 299 aa11.64□□□□□ -0.55
CKS1B-202ENST00000368436 SPCS3P61009 180 aa11.64□□□□□ -0.55
CKS1B-202ENST00000368436 CTF1Q16619 201 aa11.64□□□□□ -0.55
CKS1B-202ENST00000368436 TIGITQ495A1 244 aa11.64□□□□□ -0.55
CKS1B-202ENST00000368436 MORN3Q6PF18 240 aaPredicted RBP11.64□□□□□ -0.55
CKS1B-202ENST00000368436 FAM219AQ8IW50 185 aa11.64□□□□□ -0.55
CKS1B-202ENST00000368436 STXBP6Q8NFX7 210 aa11.64□□□□□ -0.55
CKS1B-202ENST00000368436 OR52E5Q8NH55 327 aa11.64□□□□□ -0.55
CKS1B-202ENST00000368436 DCANP1Q8TF63 244 aa11.64□□□□□ -0.55
CKS1B-202ENST00000368436 C15orf40Q8WUR7 153 aa11.64□□□□□ -0.55
CKS1B-202ENST00000368436 U3KQE9 123 aa11.64□□□□□ -0.55
CKS1B-202ENST00000368436 ZNF705EA8MWA4 302 aaPredicted RBP11.63□□□□□ -0.55
CKS1B-202ENST00000368436 C11orf94C9JXX5 98 aa11.63□□□□□ -0.55
CKS1B-202ENST00000368436 SCGB2A1O75556 95 aa11.63□□□□□ -0.55
CKS1B-202ENST00000368436 RAB3DO95716 219 aa11.63□□□□□ -0.55
CKS1B-202ENST00000368436 RBMY1A1P0DJD3 496 aaKnown RBP11.63□□□□□ -0.55
CKS1B-202ENST00000368436 RBMY1CP0DJD4 496 aa11.63□□□□□ -0.55
CKS1B-202ENST00000368436 PRR20EP86478 221 aa11.63□□□□□ -0.55
CKS1B-202ENST00000368436 PRR20CP86479 221 aa11.63□□□□□ -0.55
CKS1B-202ENST00000368436 PRR20DP86480 221 aa11.63□□□□□ -0.55
CKS1B-202ENST00000368436 PRR20BP86481 221 aa11.63□□□□□ -0.55
CKS1B-202ENST00000368436 PRR20AP86496 221 aa11.63□□□□□ -0.55
CKS1B-202ENST00000368436 RBMY1FQ15415 496 aaKnown RBP11.63□□□□□ -0.55
CKS1B-202ENST00000368436 MARCH1Q8TCQ1 289 aa11.63□□□□□ -0.55
CKS1B-202ENST00000368436 NAA50Q9GZZ1 169 aaKnown RBP11.63□□□□□ -0.55
CKS1B-202ENST00000368436 TMEM222Q9H0R3 208 aa11.63□□□□□ -0.55
CKS1B-202ENST00000368436 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.63□□□□□ -0.55
CKS1B-202ENST00000368436 APLNQ9ULZ1 77 aa11.63□□□□□ -0.55
CKS1B-202ENST00000368436 IGHV4-28A0A0C4DH34 117 aa11.62□□□□□ -0.55
CKS1B-202ENST00000368436 GABARAPO95166 117 aa11.62□□□□□ -0.55
CKS1B-202ENST00000368436 ZNF688P0C7X2 276 aa11.62□□□□□ -0.55
CKS1B-202ENST00000368436 MIFP14174 115 aa11.62□□□□□ -0.55
CKS1B-202ENST00000368436 C4BPBP20851 252 aa11.62□□□□□ -0.55
CKS1B-202ENST00000368436 HTR2BP41595 481 aa11.62□□□□□ -0.55
CKS1B-202ENST00000368436 SCGB2B2Q4G0G5 96 aa11.62□□□□□ -0.55
CKS1B-202ENST00000368436 C2orf83Q53S99 150 aa11.62□□□□□ -0.55
CKS1B-202ENST00000368436 STEAP1BQ6NZ63 245 aa11.62□□□□□ -0.55
CKS1B-202ENST00000368436 RNASE11Q8TAA1 199 aaKnown RBP11.62□□□□□ -0.55
CKS1B-202ENST00000368436 LHFPL5Q8TAF8 219 aa11.62□□□□□ -0.55
CKS1B-202ENST00000368436 GLYATL2Q8WU03 294 aa11.62□□□□□ -0.55
CKS1B-202ENST00000368436 NARS2Q96I59 477 aaKnown RBP11.62□□□□□ -0.55
CKS1B-202ENST00000368436 RTBDNQ9BSG5 229 aaPredicted RBP11.62□□□□□ -0.55
CKS1B-202ENST00000368436 DNAH6Q9C0G6 4158 aa11.61□□□□□ -0.55
CKS1B-202ENST00000368436 TEX13DA0A0J9YY54 714 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms