RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 TMEM70Q9BUB7 260 aa9.65□□□□□ -0.86
COPA-202ENST00000368069 Q9H3A6 140 aa9.65□□□□□ -0.86
COPA-202ENST00000368069 NRN1Q9NPD7 142 aa9.65□□□□□ -0.86
COPA-202ENST00000368069 DPM3Q9P2X0 92 aa9.65□□□□□ -0.86
COPA-202ENST00000368069 IGKV1D-17A0A075B6S4 117 aa9.65□□□□□ -0.87
COPA-202ENST00000368069 TRAV5A0A0B4J249 113 aa9.65□□□□□ -0.87
COPA-202ENST00000368069 ANOS1P23352 680 aa9.65□□□□□ -0.87
COPA-202ENST00000368069 C10orf55Q5SWW7 151 aa9.65□□□□□ -0.87
COPA-202ENST00000368069 LYPD6Q86Y78 171 aa9.65□□□□□ -0.87
COPA-202ENST00000368069 C14orf144Q96I85 54 aa9.65□□□□□ -0.87
COPA-202ENST00000368069 C16orf92Q96LL3 132 aa9.65□□□□□ -0.87
COPA-202ENST00000368069 TCRBV4S1A1TA0A5B7 111 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 IGHV3-23P01764 117 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 LOXL3P58215 753 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 WFDC3Q8IUB2 231 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 GPR82Q96P67 336 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 PARD6GQ9BYG4 376 aaPredicted RBP9.64□□□□□ -0.87
COPA-202ENST00000368069 SHANK1Q9Y566 2161 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 KIAA1549LQ6ZVL6 1849 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 CACNA1HO95180 2353 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 OR4C46A6NHA9 309 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 IGKV1D-33P01593 117 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 IGKV1-33P01594 117 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 LEMD1Q68G75 181 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 C12orf54Q6X4T0 127 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 FMC1Q96HJ9 113 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 SSBP4Q9BWG4 385 aaPredicted RBP9.64□□□□□ -0.87
COPA-202ENST00000368069 LOC102724200A0A096LPH7 203 aaPredicted RBP9.64□□□□□ -0.87
COPA-202ENST00000368069 FOXH1O75593 365 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 RPS20P60866 119 aaKnown RBP9.64□□□□□ -0.87
COPA-202ENST00000368069 ZNF841Q6ZN19 808 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 LINC00469Q8N7U9 141 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 C2orf16Q68DN1 1984 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 NBASA2RRP1 2371 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 GFRA3O60609 400 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 CA1P00915 261 aaPredicted RBP9.64□□□□□ -0.87
COPA-202ENST00000368069 IGKV1-39P01597 117 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 IGKV1D-39P04432 117 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 SCGB1C2P0DMR2 95 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 RPL24P83731 157 aaKnown RBP9.64□□□□□ -0.87
COPA-202ENST00000368069 SCGB1D4Q6XE38 83 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 TMEM133Q9H2Q1 129 aa9.64□□□□□ -0.87
COPA-202ENST00000368069 ZNF600Q6ZNG1 722 aa9.63□□□□□ -0.87
COPA-202ENST00000368069 AP5S1Q9NUS5 200 aa9.63□□□□□ -0.87
COPA-202ENST00000368069 ZNF257Q9Y2Q1 563 aa9.63□□□□□ -0.87
COPA-202ENST00000368069 ALPK3Q96L96 1907 aa9.63□□□□□ -0.87
COPA-202ENST00000368069 LTBP2Q14767 1821 aa9.63□□□□□ -0.87
COPA-202ENST00000368069 FOXL1Q12952 345 aa9.63□□□□□ -0.87
COPA-202ENST00000368069 C21orf62-AS1Q17RA5 79 aa9.63□□□□□ -0.87
COPA-202ENST00000368069 TCF24Q7RTU0 167 aa9.63□□□□□ -0.87
COPA-202ENST00000368069 IGHV3OR16-13A0A075B7E8 117 aa9.63□□□□□ -0.87
COPA-202ENST00000368069 IGHV3-74A0A0B4J1X5 117 aa9.63□□□□□ -0.87
COPA-202ENST00000368069 MAP1LC3AQ9H492 121 aa9.63□□□□□ -0.87
COPA-202ENST00000368069 IGKV3-15P01624 115 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 IGHG3P01860 377 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 FAM53AQ6NSI3 398 aaPredicted RBP9.62□□□□□ -0.87
COPA-202ENST00000368069 WDR86Q86TI4 376 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 RNF138Q8WVD3 245 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 EPDR1Q9UM22 224 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 A0A1B0GUT8 65 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 LYNX1G3V0Z9 82 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 LYNX1P0DP58 116 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 CX3CL1P78423 397 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 C2orf83Q53S99 150 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 ACTL10Q5JWF8 245 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 MIEN1Q9BRT3 115 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 GNB1LQ9BYB4 327 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 CHODLQ9H9P2 273 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 MUC21A0A0G2JKD1 596 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 MUC21A0A140T8X8 626 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 MUC21Q5SSG8 566 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 RBPMS2Q6ZRY4 209 aaKnown RBP9.62□□□□□ -0.87
COPA-202ENST00000368069 ST6GALNAC6Q969X2 333 aa9.62□□□□□ -0.87
COPA-202ENST00000368069 PF4V1P10720 104 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 SAPCD1Q5SSQ6 148 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 SSC4DQ8WTU2 575 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 PET117Q6UWS5 81 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 TMEM136Q6ZRR5 245 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 LHFPL4Q7Z7J7 247 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 PPP1R27Q86WC6 154 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 TMEM256Q8N2U0 113 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 OR10J6PQ8NGY7 276 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 COL25A1Q9BXS0 654 aaPredicted RBP9.61□□□□□ -0.87
COPA-202ENST00000368069 SOX21Q9Y651 276 aaPredicted RBP9.61□□□□□ -0.87
COPA-202ENST00000368069 DOCK11Q5JSL3 2073 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 CADP27708 2225 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 IGHV3OR16-8A0A075B7F1 116 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 ZNF726P1Q15940 193 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 C21orf62Q9NYP8 219 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 C9JCJ5 164 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.61□□□□□ -0.87
COPA-202ENST00000368069 ZNF324O75467 553 aaPredicted RBP9.61□□□□□ -0.87
COPA-202ENST00000368069 APOHP02749 345 aaPredicted RBP9.61□□□□□ -0.87
COPA-202ENST00000368069 HTN1P15515 57 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 DOCK10Q96BY6 2186 aa9.61□□□□□ -0.87
COPA-202ENST00000368069 DKK1O94907 266 aa9.6□□□□□ -0.87
COPA-202ENST00000368069 RNASE6Q93091 150 aaKnown RBP9.6□□□□□ -0.87
COPA-202ENST00000368069 GAFA1Q96PS6 74 aa9.6□□□□□ -0.87
COPA-202ENST00000368069 PRDM13Q9H4Q3 707 aa9.6□□□□□ -0.87
COPA-202ENST00000368069 OTORQ9NRC9 128 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms