RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 LY96Q9Y6Y9 160 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 USP24Q9UPU5 2620 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 ZNF891A8MT65 544 aaPredicted RBP11.08□□□□□ -0.64
PRKN-205ENST00000366897 MGST3O14880 152 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 HSBP1O75506 76 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 IGKV3-15P01624 115 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 PRB4P10163 310 aaPredicted RBP11.08□□□□□ -0.64
PRKN-205ENST00000366897 UBE2L3P68036 154 aaKnown RBP11.08□□□□□ -0.64
PRKN-205ENST00000366897 EBLN2Q6P2I7 272 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 Q6ZT83 130 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 SPATA12Q7Z6I5 190 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 SPACA3Q8IXA5 215 aa11.08□□□□□ -0.64
PRKN-205ENST00000366897 FAM90A9PA6NNJ1 464 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 ISLRO14498 428 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 HLA-DQA1P01909 254 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 TSPOP30536 169 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 C17orf58Q2M2W7 97 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 TRAT1Q6PIZ9 186 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 IGF2BP2-AS1Q96M15 143 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 OR2V2Q96R30 315 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 RPH3ALQ9UNE2 315 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 TANC2Q9HCD6 1990 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 MGAQ8IWI9 3026 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 IGHV2OR16-5A0A0B4J2B6 119 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 GNG5P63218 68 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 STUMQ69YW2 141 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 C9orf106Q8NAJ2 232 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 FOXA2Q9Y261 457 aaPredicted RBP11.07□□□□□ -0.64
PRKN-205ENST00000366897 ADGRG4Q8IZF6 3080 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 KALRNO60229 2985 aa11.07□□□□□ -0.64
PRKN-205ENST00000366897 SMIM27A0A1W2PRY6 76 aa11.06□□□□□ -0.64
PRKN-205ENST00000366897 SRRM5B3KS81 715 aa11.06□□□□□ -0.64
PRKN-205ENST00000366897 KIR2DL2P43627 348 aaPredicted RBP11.06□□□□□ -0.64
PRKN-205ENST00000366897 PPOXP50336 477 aa11.06□□□□□ -0.64
PRKN-205ENST00000366897 ANKRD11Q6UB99 2663 aaPredicted RBP11.06□□□□□ -0.64
PRKN-205ENST00000366897 IGHV1-18A0A0C4DH31 117 aa11.06□□□□□ -0.64
PRKN-205ENST00000366897 M0R2Z0 102 aa11.06□□□□□ -0.64
PRKN-205ENST00000366897 MCRIP2Q9BUT9 160 aaKnown RBP11.06□□□□□ -0.64
PRKN-205ENST00000366897 ACACAQ13085 2346 aa11.06□□□□□ -0.64
PRKN-205ENST00000366897 IGLL1P15814 213 aa11.06□□□□□ -0.64
PRKN-205ENST00000366897 FOXA3P55318 350 aaPredicted RBP11.06□□□□□ -0.64
PRKN-205ENST00000366897 SRSF6Q13247 344 aaKnown RBP11.06□□□□□ -0.64
PRKN-205ENST00000366897 TMEM164Q5U3C3 297 aa11.06□□□□□ -0.64
PRKN-205ENST00000366897 SLC25A10Q9UBX3 287 aaPredicted RBP11.06□□□□□ -0.64
PRKN-205ENST00000366897 APC2O95996 2303 aa11.06□□□□□ -0.64
PRKN-205ENST00000366897 E7EUB6 86 aa11.05□□□□□ -0.64
PRKN-205ENST00000366897 H3BTX0 84 aa11.05□□□□□ -0.64
PRKN-205ENST00000366897 F2RL2O00254 374 aa11.05□□□□□ -0.64
PRKN-205ENST00000366897 CRYABP02511 175 aaKnown RBP11.05□□□□□ -0.64
PRKN-205ENST00000366897 REG1BP48304 166 aa11.05□□□□□ -0.64
PRKN-205ENST00000366897 RPL19P84098 196 aaKnown RBP11.05□□□□□ -0.64
PRKN-205ENST00000366897 NUP35Q8NFH5 326 aa11.05□□□□□ -0.64
PRKN-205ENST00000366897 SLC25A33Q9BSK2 321 aa11.05□□□□□ -0.64
PRKN-205ENST00000366897 POLEQ07864 2286 aa11.05□□□□□ -0.64
PRKN-205ENST00000366897 IZUMO1RA6ND01 250 aa11.05□□□□□ -0.64
PRKN-205ENST00000366897 VWC2LB2RUY7 222 aa11.05□□□□□ -0.64
PRKN-205ENST00000366897 C8orf88P0DMB2 117 aa11.05□□□□□ -0.64
PRKN-205ENST00000366897 C10orf55Q5SWW7 151 aa11.05□□□□□ -0.64
PRKN-205ENST00000366897 LINC00173Q6ZV60 143 aa11.05□□□□□ -0.64
PRKN-205ENST00000366897 ITLN1Q8WWA0 313 aa11.05□□□□□ -0.64
PRKN-205ENST00000366897 ZPBPQ9BS86 351 aa11.05□□□□□ -0.64
PRKN-205ENST00000366897 TIMM8BQ9Y5J9 83 aaPredicted RBP11.05□□□□□ -0.64
PRKN-205ENST00000366897 PCNX1Q96RV3 2341 aa11.05□□□□□ -0.64
PRKN-205ENST00000366897 FAM181BA6NEQ2 426 aa11.04□□□□□ -0.64
PRKN-205ENST00000366897 OR2D3Q8NGH3 330 aa11.04□□□□□ -0.64
PRKN-205ENST00000366897 AMMECR1Q9Y4X0 333 aaPredicted RBP11.04□□□□□ -0.64
PRKN-205ENST00000366897 TEX50A0A1B0GTY4 177 aa11.04□□□□□ -0.64
PRKN-205ENST00000366897 NUDT10Q8NFP7 164 aa11.04□□□□□ -0.64
PRKN-205ENST00000366897 NUDT11Q96G61 164 aa11.04□□□□□ -0.64
PRKN-205ENST00000366897 FAM167A-AS1Q96KT0 104 aa11.04□□□□□ -0.64
PRKN-205ENST00000366897 OR8B2Q96RD0 313 aa11.04□□□□□ -0.64
PRKN-205ENST00000366897 SLC25A2Q9BXI2 301 aa11.04□□□□□ -0.64
PRKN-205ENST00000366897 ASCL3Q9NQ33 180 aa11.04□□□□□ -0.64
PRKN-205ENST00000366897 COL27A1Q8IZC6 1860 aaPredicted RBP11.04□□□□□ -0.64
PRKN-205ENST00000366897 CACNA1BQ00975 2339 aa11.04□□□□□ -0.64
PRKN-205ENST00000366897 TAS2R45P59539 299 aa11.03□□□□□ -0.64
PRKN-205ENST00000366897 SELENOVP59797 346 aa11.03□□□□□ -0.64
PRKN-205ENST00000366897 TCF24Q7RTU0 167 aa11.03□□□□□ -0.64
PRKN-205ENST00000366897 FAM216BQ8N7L0 139 aa11.03□□□□□ -0.64
PRKN-205ENST00000366897 BLNKQ8WV28 456 aa11.03□□□□□ -0.64
PRKN-205ENST00000366897 TNFRSF19Q9NS68 423 aa11.03□□□□□ -0.64
PRKN-205ENST00000366897 HIGD1CA8MV81 97 aa11.03□□□□□ -0.64
PRKN-205ENST00000366897 SAA1P0DJI8 122 aaPredicted RBP11.03□□□□□ -0.64
PRKN-205ENST00000366897 KLHDC1Q8N7A1 406 aa11.03□□□□□ -0.64
PRKN-205ENST00000366897 PPP1R35Q8TAP8 253 aa11.03□□□□□ -0.64
PRKN-205ENST00000366897 CORO2AQ92828 525 aa11.03□□□□□ -0.64
PRKN-205ENST00000366897 CCL13Q99616 98 aa11.03□□□□□ -0.64
PRKN-205ENST00000366897 C21orf140B9A014 251 aa11.02□□□□□ -0.64
PRKN-205ENST00000366897 H0Y8G0 127 aa11.02□□□□□ -0.64
PRKN-205ENST00000366897 RNASE2P10153 161 aaKnown RBP11.02□□□□□ -0.64
PRKN-205ENST00000366897 CEACAM8P31997 349 aaPredicted RBP11.02□□□□□ -0.64
PRKN-205ENST00000366897 KIR2DS2P43631 304 aa11.02□□□□□ -0.64
PRKN-205ENST00000366897 PRCDQ00LT1 54 aa11.02□□□□□ -0.64
PRKN-205ENST00000366897 ZNF841Q6ZN19 808 aa11.02□□□□□ -0.64
PRKN-205ENST00000366897 KBTBD11-OT1A0A1B0GTJ5 212 aa11.02□□□□□ -0.65
PRKN-205ENST00000366897 UPK2O00526 184 aa11.02□□□□□ -0.65
PRKN-205ENST00000366897 APELAP0DMC3 54 aa11.02□□□□□ -0.65
PRKN-205ENST00000366897 CT45A6P0DMU7 189 aa11.02□□□□□ -0.65
PRKN-205ENST00000366897 CT45A5P0DMU8 189 aa11.02□□□□□ -0.65
PRKN-205ENST00000366897 CT45A7P0DMV0 189 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms