RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 HIGD1CA8MV81 97 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 TIMP3P35625 211 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 NABP1Q96AH0 204 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 NEU1Q99519 415 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 TMEM133Q9H2Q1 129 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 SIGLEC5O15389 551 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 ARF6P62330 175 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 TFF3Q07654 80 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 TRBV20OR9-2A0A075B6H5 130 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 IGFBP2P18065 325 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 RNASE6Q93091 150 aaKnown RBP10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 RTN4RQ9BZR6 473 aa10.07□□□□□ -0.8
CDC42BPA-203ENST00000366766 IGHV3-72A0A0B4J1Y9 119 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 C2orf88Q9BSF0 95 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 A0A0G2JMM0 328 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 A0A1W2PPB8 328 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 A0A1W2PRS3 328 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 KIR3DP1A8MWS1 328 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 HIST1H2BKO60814 126 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 HIST1H2BJP06899 126 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 HIST1H2BOP23527 126 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 HIST1H2BBP33778 126 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 HIST1H2BDP58876 126 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 HIST1H2BCP62807 126 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 HIST2H2BEQ16778 126 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 SLC25A48Q6ZT89 311 aaKnown RBP10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 HIST1H2BHQ93079 126 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 SMIM12Q96EX1 92 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 PRELID3AQ96N28 172 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 HIST1H2BNQ99877 126 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 HIST1H2BMQ99879 126 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 SPOCK3Q9BQ16 436 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 F2Z2F3 143 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 LYZL4Q96KX0 146 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 ITGB1BP1O14713 200 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 NDUFAF3Q9BU61 184 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 GEMIN7Q9H840 131 aaKnown RBP10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 WDR83OSQ9Y284 106 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 ASIPP42127 132 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 GGNQ86UU5 652 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 CACNG7P62955 275 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 NMSQ5H8A3 153 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 ALKBH7Q9BT30 221 aaPredicted RBP10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 PRR14LQ5THK1 2151 aa10.06□□□□□ -0.8
CDC42BPA-203ENST00000366766 CCL19Q99731 98 aa10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 GRIFINA4D1Z8 144 aa10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 PPP1R27Q86WC6 154 aa10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 ETV2O00321 342 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 SAA1P0DJI8 122 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 SRSF8Q9BRL6 282 aaKnown RBP10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 H0YIZ8 118 aa10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 SUPT4H1P63272 117 aaKnown RBP10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 Q9H3A6 140 aa10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 SCO2A0A1W2PP80 73 aa10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 ZNF324O75467 553 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 HINT1P49773 126 aaPredicted RBP10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 CD69Q07108 199 aa10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 ASCL4Q6XD76 172 aa10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 MOB4Q9Y3A3 225 aa10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 IGKV1D-13A0A0B4J2D9 117 aa10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 IGKV1-13P0DP09 117 aa10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 H3BVH4 76 aa10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 CELA3AP09093 270 aa10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 ST20Q9HBF5 79 aa10.05□□□□□ -0.8
CDC42BPA-203ENST00000366766 MDKP21741 143 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 QRFPP83859 136 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 CBLN4Q9NTU7 201 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 REG1AP05451 166 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 STAG3L3P0CL85 134 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 PROB1E7EW31 1015 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 H3BRM9 83 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 FOXL2NBQ6ZUU3 175 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 MRPL20Q9BYC9 149 aaKnown RBP10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 A0A0A6YYD4 124 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 LOC107984156A0A0G2JMH3 177 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 RAMP3O60896 148 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 ARL17AQ8IVW1 177 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 EAF1Q96JC9 268 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 TMEM14EPQ6UXP3 125 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 LEAP2Q969E1 77 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 GHRHP01286 108 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 OR4X2Q8NGF9 303 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 ZNF837Q96EG3 531 aaPredicted RBP10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 SMPXQ9UHP9 88 aa10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 PNRC2Q9NPJ4 139 aaKnown RBP10.04□□□□□ -0.8
CDC42BPA-203ENST00000366766 E9PLN8 166 aa10.03□□□□□ -0.8
CDC42BPA-203ENST00000366766 NDUFS6O75380 124 aaKnown RBP10.03□□□□□ -0.8
CDC42BPA-203ENST00000366766 VKORC1Q9BQB6 163 aa10.03□□□□□ -0.8
CDC42BPA-203ENST00000366766 CEACAM4O75871 244 aa10.03□□□□□ -0.8
CDC42BPA-203ENST00000366766 EFNB3Q15768 340 aa10.03□□□□□ -0.8
CDC42BPA-203ENST00000366766 NAV3Q8IVL0 2385 aa10.03□□□□□ -0.8
CDC42BPA-203ENST00000366766 FER1L6-AS1Q8NA97 138 aa10.03□□□□□ -0.8
CDC42BPA-203ENST00000366766 PLPPR1Q8TBJ4 325 aa10.03□□□□□ -0.8
CDC42BPA-203ENST00000366766 SORL1Q92673 2214 aa10.03□□□□□ -0.8
CDC42BPA-203ENST00000366766 TEX38Q6PEX7 206 aa10.03□□□□□ -0.8
CDC42BPA-203ENST00000366766 TSKUQ8WUA8 353 aa10.03□□□□□ -0.8
CDC42BPA-203ENST00000366766 RNF125Q96EQ8 232 aa10.03□□□□□ -0.8
CDC42BPA-203ENST00000366766 FBXL7Q9UJT9 491 aa10.03□□□□□ -0.8
CDC42BPA-203ENST00000366766 HTN1P15515 57 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms