RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 STX5Q13190 355 aa0.55□□□□□ -2.32
RNU4-56P-201ENST00000364700 C12orf74Q32Q52 190 aa0.55□□□□□ -2.32
RNU4-56P-201ENST00000364700 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.55□□□□□ -2.32
RNU4-56P-201ENST00000364700 DEFB128Q7Z7B8 93 aa0.55□□□□□ -2.32
RNU4-56P-201ENST00000364700 TMEM106AQ96A25 262 aa0.55□□□□□ -2.32
RNU4-56P-201ENST00000364700 ADAT3Q96EY9 351 aaPredicted RBP0.55□□□□□ -2.32
RNU4-56P-201ENST00000364700 CCDC42Q96M95 316 aa0.55□□□□□ -2.32
RNU4-56P-201ENST00000364700 TLNRD1Q9H1K6 362 aa0.55□□□□□ -2.32
RNU4-56P-201ENST00000364700 CST9LQ9H4G1 147 aa0.55□□□□□ -2.32
RNU4-56P-201ENST00000364700 RNF122Q9H9V4 155 aa0.55□□□□□ -2.32
RNU4-56P-201ENST00000364700 SLC22A13Q9Y226 551 aa0.55□□□□□ -2.32
RNU4-56P-201ENST00000364700 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
RNU4-56P-201ENST00000364700 TTC21AQ8NDW8 1320 aa0.55□□□□□ -2.32
RNU4-56P-201ENST00000364700 MYO18AQ92614 2054 aaKnown RBP0.55□□□□□ -2.32
RNU4-56P-201ENST00000364700 UBR2Q8IWV8 1755 aa0.55□□□□□ -2.32
RNU4-56P-201ENST00000364700 MYH2Q9UKX2 1941 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 IGKV3D-7A0A0C4DH55 119 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 IGKV1-9A0A0C4DH69 117 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 IGKV3OR2-268A0A0C4DH90 116 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 hADV38S2A0JD32 116 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 TMEM212A6NML5 194 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 SDCBPO00560 298 aaPredicted RBP0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 TNNC2P02585 160 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 COX6A1P12074 109 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 HOXA6P31267 233 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 OMPP47874 163 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 SRSF6Q13247 344 aaKnown RBP0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 PDE6HQ13956 83 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 EDDM3AQ14507 147 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 NDUFA5Q16718 116 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 LINC01554Q52M75 96 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 MIR17HGQ75NE6 70 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 TRAPPC5Q8IUR0 188 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 ANKRD29Q8N6D5 301 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 OR52L1Q8NGH7 329 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 SCGB3A1Q96QR1 104 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 TMEM147Q9BVK8 224 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 REG4Q9BYZ8 158 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 TMEM133Q9H2Q1 129 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 FAM96AQ9H5X1 160 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 C14orf105Q9NVL8 296 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 PRELID3BQ9Y3B1 194 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 SOX21Q9Y651 276 aaPredicted RBP0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 NOTCH1P46531 2555 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 ALPK3Q96L96 1907 aa0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 CHD3Q12873 2000 aaKnown RBP0.54□□□□□ -2.32
RNU4-56P-201ENST00000364700 SNRNP200O75643 2136 aaKnown RBP0.53□□□□□ -2.32
RNU4-56P-201ENST00000364700 UNC13CQ8NB66 2214 aa0.53□□□□□ -2.32
RNU4-56P-201ENST00000364700 LOC110117498A0A087WWA1 95 aa0.53□□□□□ -2.32
RNU4-56P-201ENST00000364700 C2orf70A6NJV1 201 aa0.53□□□□□ -2.32
RNU4-56P-201ENST00000364700 E2F6O75461 281 aa0.53□□□□□ -2.32
RNU4-56P-201ENST00000364700 CDK5R1Q15078 307 aa0.53□□□□□ -2.32
RNU4-56P-201ENST00000364700 TMEM97Q5BJF2 176 aa0.53□□□□□ -2.32
RNU4-56P-201ENST00000364700 C3orf56Q8N813 242 aa0.53□□□□□ -2.32
RNU4-56P-201ENST00000364700 DCUN1D1Q96GG9 259 aa0.53□□□□□ -2.32
RNU4-56P-201ENST00000364700 OR51V1Q9H2C8 321 aa0.53□□□□□ -2.32
RNU4-56P-201ENST00000364700 MIXL1Q9H2W2 232 aa0.53□□□□□ -2.32
RNU4-56P-201ENST00000364700 CKLFQ9UBR5 152 aa0.53□□□□□ -2.32
RNU4-56P-201ENST00000364700 CYSLTR1Q9Y271 337 aa0.53□□□□□ -2.32
RNU4-56P-201ENST00000364700 MYH3P11055 1940 aa0.53□□□□□ -2.32
RNU4-56P-201ENST00000364700 EML5Q05BV3 1969 aa0.53□□□□□ -2.32
RNU4-56P-201ENST00000364700 MED1Q15648 1581 aaPredicted RBP0.53□□□□□ -2.33
RNU4-56P-201ENST00000364700 TRAV9-1A0A075B6T8 112 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 SMIM23A6NLE4 172 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 RPP14O95059 124 aaKnown RBP0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 IFNA10P01566 189 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 ASAH2BP0C7U1 165 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 SPI1P17947 270 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 RNASE4P34096 147 aaKnown RBP0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 EIF2B2P49770 351 aaKnown RBP0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 HIST1H3AP68431 136 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 H3F3AP84243 136 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 BPIFA4PQ86YQ2 179 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 CLVS1Q8IUQ0 354 aaPredicted RBP0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 SIGLECL1Q8N7X8 197 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 GDPD1Q8N9F7 314 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 MNS1Q8NEH6 495 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 OR4D11Q8NGI4 311 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 WFDC5Q8TCV5 224 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 AQP3Q92482 292 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 BORCS7Q96B45 105 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 COMMD5Q9GZQ3 224 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 UQCC1Q9NVA1 299 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 UBAP1Q9NZ09 502 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 FBXO5Q9UKT4 447 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 ERGIC3Q9Y282 383 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 RIC1Q4ADV7 1423 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 ADGRL3Q9HAR2 1447 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 CAMSAP1Q5T5Y3 1602 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 TAF1LQ8IZX4 1826 aa0.52□□□□□ -2.33
RNU4-56P-201ENST00000364700 IGKV3-7A0A075B6H7 116 aa0.51□□□□□ -2.33
RNU4-56P-201ENST00000364700 A0A0D9SG52 128 aa0.51□□□□□ -2.33
RNU4-56P-201ENST00000364700 TMEM114B3SHH9 223 aa0.51□□□□□ -2.33
RNU4-56P-201ENST00000364700 LYZL6O75951 148 aa0.51□□□□□ -2.33
RNU4-56P-201ENST00000364700 S100A6P06703 90 aa0.51□□□□□ -2.33
RNU4-56P-201ENST00000364700 UBBP0CG47 229 aa0.51□□□□□ -2.33
RNU4-56P-201ENST00000364700 SRIP30626 198 aa0.51□□□□□ -2.33
RNU4-56P-201ENST00000364700 CNBPP62633 177 aaKnown RBP0.51□□□□□ -2.33
RNU4-56P-201ENST00000364700 FADDQ13158 208 aa0.51□□□□□ -2.33
RNU4-56P-201ENST00000364700 CDK10Q15131 360 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms