RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 RAB31Q13636 194 aa8.59□□□□□ -1.03
SMC3-201ENST00000361804 GAFA1Q96PS6 74 aa8.59□□□□□ -1.03
SMC3-201ENST00000361804 SFXN3Q9BWM7 321 aa8.59□□□□□ -1.03
SMC3-201ENST00000361804 LPAR2Q9HBW0 351 aa8.59□□□□□ -1.03
SMC3-201ENST00000361804 IL19Q9UHD0 177 aa8.59□□□□□ -1.03
SMC3-201ENST00000361804 FOSL1P15407 271 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 CAMPP49913 170 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 UBE2L3P68036 154 aaKnown RBP8.58□□□□□ -1.04
SMC3-201ENST00000361804 CX3CL1P78423 397 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 KIR3DL3Q8N743 410 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 ZNF439Q8NDP4 499 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 MED13LQ71F56 2210 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 LHBP01229 141 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 FTH1P19P0C7X4 201 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 TIGITQ495A1 244 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 SPATA45Q537H7 98 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 LEMD1Q68G75 181 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 ERASQ7Z444 233 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 DEFB124Q8NES8 71 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 PRSS33Q8NF86 280 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 BLNKQ8WV28 456 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 SLC25A2Q9BXI2 301 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 FNDC4Q9H6D8 234 aaPredicted RBP8.58□□□□□ -1.04
SMC3-201ENST00000361804 CFAP46Q8IYW2 2715 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 C9JCJ5 164 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 MOSP00540 346 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 RPLP1P05386 114 aaKnown RBP8.58□□□□□ -1.04
SMC3-201ENST00000361804 C3orf79P0CE67 100 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 RNASE2P10153 161 aaKnown RBP8.58□□□□□ -1.04
SMC3-201ENST00000361804 C21orf62-AS1Q17RA5 79 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 TMEM183BQ1AE95 376 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 TRAT1Q6PIZ9 186 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 IGFBPL1Q8WX77 278 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 GSX1Q9H4S2 264 aaPredicted RBP8.58□□□□□ -1.04
SMC3-201ENST00000361804 TECRQ9NZ01 308 aaKnown RBP8.58□□□□□ -1.04
SMC3-201ENST00000361804 ABCA4P78363 2273 aa8.58□□□□□ -1.04
SMC3-201ENST00000361804 UPK2O00526 184 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 IGHV1-46P01743 117 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 RPL8P62917 257 aaKnown RBP8.57□□□□□ -1.04
SMC3-201ENST00000361804 TNFAIP6P98066 277 aaPredicted RBP8.57□□□□□ -1.04
SMC3-201ENST00000361804 ZNF841Q6ZN19 808 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 PPP1R35Q8TAP8 253 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 SH3BGRL2Q9UJC5 107 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 FAM90A9PA6NNJ1 464 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 VWC2LB2RUY7 222 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 ISLRO14498 428 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 MT-CO2P00403 227 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 RANP62826 216 aaKnown RBP8.57□□□□□ -1.04
SMC3-201ENST00000361804 PAFAH1B2P68402 229 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 PRCDQ00LT1 54 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 NIT1Q86X76 327 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 NPIPB3Q92617 1050 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 FAM167A-AS1Q96KT0 104 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 IGF2BP2-AS1Q96M15 143 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 HARBI1Q96MB7 349 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 CR1LQ2VPA4 569 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 SARAFQ96BY9 339 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 SLC25A33Q9BSK2 321 aa8.57□□□□□ -1.04
SMC3-201ENST00000361804 MCRIP2Q9BUT9 160 aaKnown RBP8.57□□□□□ -1.04
SMC3-201ENST00000361804 USF1P22415 310 aaPredicted RBP8.56□□□□□ -1.04
SMC3-201ENST00000361804 PTPRZ1P23471 2315 aaPredicted RBP8.56□□□□□ -1.04
SMC3-201ENST00000361804 MFAP2P55001 183 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 CACNA1BQ00975 2339 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 HCP5Q6MZN7 132 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 STPG4Q8N801 248 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 TSKUQ8WUA8 353 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 ST6GALNAC6Q969X2 333 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 TMEM68Q96MH6 324 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 WT1-ASQ06250 92 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 PATE2Q6UY27 113 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 SPATA12Q7Z6I5 190 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 C20orf144Q9BQM9 153 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 GNB1LQ9BYB4 327 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 FAM215AQ9Y5M1 114 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 DLEU1O43261 78 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 OR5G3P0C626 314 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 RAB7AP51149 207 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 TNXAQ16473 311 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 DMRTA1Q5VZB9 504 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 STUMQ69YW2 141 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 TXNDC17Q9BRA2 123 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 RNF7Q9UBF6 113 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 CGB1A6NKQ9 187 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 FOXA3P55318 350 aaPredicted RBP8.56□□□□□ -1.04
SMC3-201ENST00000361804 Q0VG73 95 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 C1orf162Q8NEQ5 155 aaPredicted RBP8.56□□□□□ -1.04
SMC3-201ENST00000361804 H1FXQ92522 213 aaKnown RBP8.56□□□□□ -1.04
SMC3-201ENST00000361804 KCNS1Q96KK3 526 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 TUBG2Q9NRH3 451 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 ZNF586Q9NXT0 402 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 SSUH2Q9Y2M2 353 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 GOLT1BQ9Y3E0 138 aa8.56□□□□□ -1.04
SMC3-201ENST00000361804 ORM2P19652 201 aa8.55□□□□□ -1.04
SMC3-201ENST00000361804 LINC00322Q6ZN03 302 aaPredicted RBP8.55□□□□□ -1.04
SMC3-201ENST00000361804 TCF24Q7RTU0 167 aa8.55□□□□□ -1.04
SMC3-201ENST00000361804 CLEC5AQ9NY25 188 aa8.55□□□□□ -1.04
SMC3-201ENST00000361804 ZNF324O75467 553 aaPredicted RBP8.55□□□□□ -1.04
SMC3-201ENST00000361804 APCSP02743 223 aa8.55□□□□□ -1.04
SMC3-201ENST00000361804 C8orf88P0DMB2 117 aa8.55□□□□□ -1.04
SMC3-201ENST00000361804 ESDP10768 282 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms