RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 UBE2G2P60604 165 aa10.62□□□□□ -0.71
SQSTM1-201ENST00000360718 RELBQ01201 579 aa10.62□□□□□ -0.71
SQSTM1-201ENST00000360718 PAX2Q02962 417 aa10.62□□□□□ -0.71
SQSTM1-201ENST00000360718 RAB31Q13636 194 aa10.62□□□□□ -0.71
SQSTM1-201ENST00000360718 HLA-DRB5Q30154 266 aa10.62□□□□□ -0.71
SQSTM1-201ENST00000360718 TGIF2LXQ8IUE1 241 aa10.62□□□□□ -0.71
SQSTM1-201ENST00000360718 TMEM37Q8WXS4 190 aa10.62□□□□□ -0.71
SQSTM1-201ENST00000360718 SLC35D1Q9NTN3 355 aa10.62□□□□□ -0.71
SQSTM1-201ENST00000360718 FUT9Q9Y231 359 aa10.62□□□□□ -0.71
SQSTM1-201ENST00000360718 MT-CO2P00403 227 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 STAG3L2P0CL84 134 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 STAG3L3P0CL85 134 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 CHRNA7P36544 502 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 FOXL1Q12952 345 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 CLEC12BQ2HXU8 276 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 ST6GALNAC6Q969X2 333 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 MRPL20Q9BYC9 149 aaKnown RBP10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 PXMP4Q9Y6I8 212 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 MDFIC2A0A1B0GVS7 189 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 RRHO14718 337 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 ATP5G3P48201 142 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 REG1BP48304 166 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 DIAPH2-AS1Q14236 149 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 FAM78BQ5VT40 261 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 ENY2Q9NPA8 101 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 TMEM140Q9NV12 185 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 BEX4Q9NWD9 120 aaPredicted RBP10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 ITPR2Q14571 2701 aa10.61□□□□□ -0.71
SQSTM1-201ENST00000360718 BUB1B-PAK6H3BSN5 160 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 CNN1P51911 297 aaKnown RBP10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 TAS2R60P59551 318 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 GCSAMLQ5JQS6 135 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 OR11H6Q8NGC7 330 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 MGST2Q99735 147 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 GGTLC1Q9BX51 225 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 TCF19Q9Y242 345 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 TET2Q6N021 2002 aaPredicted RBP10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 UNC79Q9P2D8 2635 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 HECTD1Q9ULT8 2610 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 A0A0U1RQK1 487 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 ZNF320A2RRD8 509 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 PRSS46E5RG02 174 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 ARL14EPLP0DKL9 152 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 GZMBP10144 247 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 DEFA4P12838 97 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 SLC25A16P16260 332 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 MC5RP33032 325 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 CEACAM3P40198 252 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 VMO1Q7Z5L0 202 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 OR5AN1Q8NGI8 311 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 RPEQ96AT9 228 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 NOL4LQ96MY1 436 aaPredicted RBP10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 TRAPPC1Q9Y5R8 145 aa10.6□□□□□ -0.71
SQSTM1-201ENST00000360718 HTR1DP28221 377 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 RAB4BP61018 213 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 RHOBP62745 196 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 MIC13Q5XKP0 118 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 TEPPQ6URK8 271 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 PDPNQ86YL7 162 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 SFRP2Q96HF1 295 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 RHOVQ96L33 236 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 NABP2Q9BQ15 211 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 LPAR2Q9HBW0 351 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 POLR3KQ9Y2Y1 108 aaPredicted RBP10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 WASHC3Q9Y3C0 194 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 INSIG2Q9Y5U4 225 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 PDZD2O15018 2839 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 ZANQ9Y493 2812 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 C15orf61A6NNL5 157 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 H0YJW9 148 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 TOX4O94842 621 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 HSPE1P61604 102 aaKnown RBP10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 TMEM144Q7Z5S9 345 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 VKORC1L1Q8N0U8 176 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 OR4P4Q8NGL7 312 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 OSR1Q8TAX0 266 aaPredicted RBP10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 FLYWCH2Q96CP2 140 aaKnown RBP10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 C2orf88Q9BSF0 95 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 SIRPDQ9H106 197 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 PRO1933Q9H354 126 aa10.59□□□□□ -0.71
SQSTM1-201ENST00000360718 USF1P22415 310 aaPredicted RBP10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 NPY1RP25929 384 aa10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 KLRD1Q13241 179 aa10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 DEFB113Q30KQ7 82 aa10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 HCP5Q6MZN7 132 aa10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 OR4C13Q8NGP0 309 aa10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 UHRF2Q96PU4 802 aa10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 DPM3Q9P2X0 92 aa10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 FOXA2Q9Y261 457 aaPredicted RBP10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 LSM4Q9Y4Z0 139 aaKnown RBP10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 TRAV9-1A0A075B6T8 112 aa10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 A0A1B0GV90 55 aa10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 FNDC10F2Z333 226 aa10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 IL6RP08887 468 aaPredicted RBP10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 RPL29P47914 159 aaKnown RBP10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 LGALS4P56470 323 aa10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 LDLRAD2Q5SZI1 272 aa10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 LRRC75A-AS1Q8N1F1 130 aa10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 SLC24A4Q8NFF2 622 aa10.58□□□□□ -0.72
SQSTM1-201ENST00000360718 OR10G8Q8NGN5 311 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms