RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 CLEC12BQ2HXU8 276 aa5.9□□□□□ -1.46
CLCN3-202ENST00000360642 RNF183Q96D59 192 aa5.9□□□□□ -1.46
CLCN3-202ENST00000360642 SNRNP40Q96DI7 357 aaKnown RBP5.9□□□□□ -1.46
CLCN3-202ENST00000360642 IMMP2LQ96T52 175 aa5.9□□□□□ -1.46
CLCN3-202ENST00000360642 SRRM4A7MD48 611 aaKnown RBP5.9□□□□□ -1.47
CLCN3-202ENST00000360642 PPP5D1E7EU14 171 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 UPK2O00526 184 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 IGKV1-16P04430 117 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 RD3LP0DJH9 198 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 GNG10P50151 68 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 PDLIM4P50479 330 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 PDZD11Q5EBL8 140 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 ACTL10Q5JWF8 245 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 LCNL1Q6ZST4 164 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 TMEM183AQ8IXX5 376 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 OSR1Q8TAX0 266 aaPredicted RBP5.9□□□□□ -1.47
CLCN3-202ENST00000360642 HIST1H2BLQ99880 126 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 PRNDQ9UKY0 176 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 OR51B2Q9Y5P1 312 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 LINC00312Q9Y6C7 94 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 PKDREJQ9NTG1 2253 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 ARFGEF3Q5TH69 2177 aa5.9□□□□□ -1.47
CLCN3-202ENST00000360642 PLCE1Q9P212 2302 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 TRBV20OR9-2A0A075B6H5 130 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 FCN3O75636 299 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 LINC00869P0C866 280 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 TDGF1P3P51864 188 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 LCN2P80188 198 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 PRCDQ00LT1 54 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 ZNF833PQ6ZTB9 187 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 TMEM144Q7Z5S9 345 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 DOLPP1Q86YN1 238 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 ZNF114Q8NC26 417 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 OR2T10Q8NGZ9 312 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 SSMEM1Q8WWF3 244 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 ELOVL5Q9NYP7 299 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 ANKRD11Q6UB99 2663 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-202ENST00000360642 DYSFO75923 2080 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 A0A1W2PPQ1 181 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 hADV38S2A0JD32 116 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 FABP4P15090 132 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 HIST1H1BP16401 226 aaKnown RBP5.89□□□□□ -1.47
CLCN3-202ENST00000360642 Q6YL49 198 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 BET1LQ9NYM9 111 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 YTHDF2Q9Y5A9 579 aaKnown RBP5.89□□□□□ -1.47
CLCN3-202ENST00000360642 TACC2O95359 2948 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 ZNF292O60281 2723 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 DPRXA6NFQ7 191 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 J3QR06 171 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 TNFRSF13BO14836 293 aaPredicted RBP5.89□□□□□ -1.47
CLCN3-202ENST00000360642 IRF2P14316 349 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 GCHFRP30047 84 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 CHRNA7P36544 502 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 RHOBP62745 196 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 SPATA31B1PQ5VZV4 182 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 RNASEH2CQ8TDP1 164 aaKnown RBP5.89□□□□□ -1.47
CLCN3-202ENST00000360642 ACY3Q96HD9 319 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 ENY2Q9NPA8 101 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 ZNRD1Q9P1U0 126 aa5.89□□□□□ -1.47
CLCN3-202ENST00000360642 TEX50A0A1B0GTY4 177 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 C16orf97H3BN30 126 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 FOXH1O75593 365 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 ATP5IP56385 69 aaPredicted RBP5.88□□□□□ -1.47
CLCN3-202ENST00000360642 CCL8P80075 99 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 MEF2CQ06413 473 aaPredicted RBP5.88□□□□□ -1.47
CLCN3-202ENST00000360642 RTL8BQ17RB0 113 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 KCNIP4Q6PIL6 250 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 OR1P1Q8NH06 330 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 OCC1Q8TAD7 63 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 SFRP2Q96HF1 295 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 PACRGQ96M98 296 aaPredicted RBP5.88□□□□□ -1.47
CLCN3-202ENST00000360642 TMEM204Q9BSN7 226 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 SLC35D1Q9NTN3 355 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 ACACAQ13085 2346 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 IGKV1OR2-108A0A075B7D4 117 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 OR4A8P0C604 315 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 RAB31Q13636 194 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 C2orf83Q53S99 150 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 C11orf52Q96A22 123 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 PLEKHA3Q9HB20 300 aa5.88□□□□□ -1.47
CLCN3-202ENST00000360642 AURKAIP1Q9NWT8 199 aaPredicted RBP5.88□□□□□ -1.47
CLCN3-202ENST00000360642 AMBPP02760 352 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 AREGP15514 252 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 IL3RAP26951 378 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 CDKN1AP38936 164 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 FAM78BQ5VT40 261 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 OR5T1Q8NG75 326 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 OR1L8Q8NGR8 309 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 OR5B3Q8NH48 314 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 ZNF596Q8TC21 504 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 GAL3ST2Q9H3Q3 398 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 FKBP11Q9NYL4 201 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 SH3BGRL2Q9UJC5 107 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 ARL2-SNX15V9GYD0 113 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 XKRY2A2RUG3 117 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 NKX6-3A6NJ46 265 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 SAA1P0DJI8 122 aaPredicted RBP5.87□□□□□ -1.47
CLCN3-202ENST00000360642 BSPH1Q075Z2 132 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 MOB3BQ86TA1 216 aa5.87□□□□□ -1.47
CLCN3-202ENST00000360642 ZCCHC24Q8N2G6 241 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms