RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 Q6ZWC4 215 aa10.27□□□□□ -0.77
GGPS1-202ENST00000358966 RAB40CQ96S21 281 aa10.27□□□□□ -0.77
GGPS1-202ENST00000358966 ABCA2Q9BZC7 2435 aa10.26□□□□□ -0.77
GGPS1-202ENST00000358966 GNG7O60262 68 aa10.26□□□□□ -0.77
GGPS1-202ENST00000358966 SAP30O75446 220 aa10.26□□□□□ -0.77
GGPS1-202ENST00000358966 IGHV1-8P0DP01 117 aa10.26□□□□□ -0.77
GGPS1-202ENST00000358966 MSMO1Q15800 293 aa10.26□□□□□ -0.77
GGPS1-202ENST00000358966 ZNF48Q96MX3 618 aaPredicted RBP10.26□□□□□ -0.77
GGPS1-202ENST00000358966 HINT2Q9BX68 163 aa10.26□□□□□ -0.77
GGPS1-202ENST00000358966 KIAA1456Q9P272 454 aa10.26□□□□□ -0.77
GGPS1-202ENST00000358966 ANKRD17O75179 2603 aaKnown RBP10.26□□□□□ -0.77
GGPS1-202ENST00000358966 A0A1W2PRD5 423 aa10.26□□□□□ -0.77
GGPS1-202ENST00000358966 A0A1W2PRF3 423 aa10.26□□□□□ -0.77
GGPS1-202ENST00000358966 A0A1W2PRM7 423 aa10.26□□□□□ -0.77
GGPS1-202ENST00000358966 CNN1P51911 297 aaKnown RBP10.26□□□□□ -0.77
GGPS1-202ENST00000358966 SAMD13Q5VXD3 122 aa10.26□□□□□ -0.77
GGPS1-202ENST00000358966 OR4A47Q6IF82 309 aa10.26□□□□□ -0.77
GGPS1-202ENST00000358966 UBE2L5PA0A1B0GUS4 154 aa10.25□□□□□ -0.77
GGPS1-202ENST00000358966 PFN1P07737 140 aaKnown RBP10.25□□□□□ -0.77
GGPS1-202ENST00000358966 RAB11AP62491 216 aa10.25□□□□□ -0.77
GGPS1-202ENST00000358966 ABHD12Q8N2K0 398 aa10.25□□□□□ -0.77
GGPS1-202ENST00000358966 OR4S2Q8NH73 311 aa10.25□□□□□ -0.77
GGPS1-202ENST00000358966 RITA1Q96K30 269 aa10.25□□□□□ -0.77
GGPS1-202ENST00000358966 PYGO2Q9BRQ0 406 aa10.25□□□□□ -0.77
GGPS1-202ENST00000358966 ONECUT1Q9UBC0 465 aa10.25□□□□□ -0.77
GGPS1-202ENST00000358966 J3QR06 171 aa10.25□□□□□ -0.77
GGPS1-202ENST00000358966 RHOGP84095 191 aa10.25□□□□□ -0.77
GGPS1-202ENST00000358966 RELBQ01201 579 aa10.25□□□□□ -0.77
GGPS1-202ENST00000358966 SLAQ13239 276 aa10.25□□□□□ -0.77
GGPS1-202ENST00000358966 ACOT6Q3I5F7 207 aaPredicted RBP10.25□□□□□ -0.77
GGPS1-202ENST00000358966 ACTL10Q5JWF8 245 aa10.25□□□□□ -0.77
GGPS1-202ENST00000358966 ZNF525Q8N782 197 aa10.25□□□□□ -0.77
GGPS1-202ENST00000358966 OR2G3Q8NGZ4 309 aa10.25□□□□□ -0.77
GGPS1-202ENST00000358966 SLC35D1Q9NTN3 355 aa10.25□□□□□ -0.77
GGPS1-202ENST00000358966 PPIAL4CA0A0B4J2A2 164 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 PPIAL4GP0DN37 164 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 DEFA4P12838 97 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 FAM3BP58499 235 aaPredicted RBP10.24□□□□□ -0.77
GGPS1-202ENST00000358966 RPS20P60866 119 aaKnown RBP10.24□□□□□ -0.77
GGPS1-202ENST00000358966 ERVK-16P61578 105 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 PNRC1Q12796 327 aaPredicted RBP10.24□□□□□ -0.77
GGPS1-202ENST00000358966 ZNF506Q5JVG8 444 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 DTX2Q86UW9 622 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 OR4A16Q8NH70 328 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 TMEM186Q96B77 213 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 ATP5SQ99766 215 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 VSIRQ9H7M9 311 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 BET1LQ9NYM9 111 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 UQCR10Q9UDW1 63 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 A0A1B0GV72 72 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 SLC25A17O43808 307 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 KLRD1Q13241 179 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 NRGNQ92686 78 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 RAB9BQ9NP90 201 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 SMPXQ9UHP9 88 aa10.24□□□□□ -0.77
GGPS1-202ENST00000358966 HYPMO75409 117 aa10.23□□□□□ -0.77
GGPS1-202ENST00000358966 THBS3P49746 956 aa10.23□□□□□ -0.77
GGPS1-202ENST00000358966 ZNF266Q14584 549 aa10.23□□□□□ -0.77
GGPS1-202ENST00000358966 FAM90A2PQ658T7 463 aa10.23□□□□□ -0.77
GGPS1-202ENST00000358966 ZNF833PQ6ZTB9 187 aa10.23□□□□□ -0.77
GGPS1-202ENST00000358966 NIT1Q86X76 327 aa10.23□□□□□ -0.77
GGPS1-202ENST00000358966 MAP1LC3B2A6NCE7 125 aa10.23□□□□□ -0.77
GGPS1-202ENST00000358966 IGFBP2P18065 325 aa10.23□□□□□ -0.77
GGPS1-202ENST00000358966 BAXQ07812 192 aa10.23□□□□□ -0.77
GGPS1-202ENST00000358966 SPATA45Q537H7 98 aa10.23□□□□□ -0.77
GGPS1-202ENST00000358966 PNKDQ8N490 385 aa10.23□□□□□ -0.77
GGPS1-202ENST00000358966 OR8B3Q8NGG8 313 aa10.23□□□□□ -0.77
GGPS1-202ENST00000358966 OR8B2Q96RD0 313 aa10.23□□□□□ -0.77
GGPS1-202ENST00000358966 MAP1LC3BQ9GZQ8 125 aa10.23□□□□□ -0.77
GGPS1-202ENST00000358966 TPSG1Q9NRR2 321 aa10.23□□□□□ -0.77
GGPS1-202ENST00000358966 IGHV2-26A0A0B4J1V2 119 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 H0YJW9 148 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 RRHO14718 337 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 SAA1P0DJI8 122 aaPredicted RBP10.22□□□□□ -0.77
GGPS1-202ENST00000358966 PRRX1P54821 245 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 SLC38A11Q08AI6 406 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 C10orf55Q5SWW7 151 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 C16orf82Q7Z2V1 217 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 CTDSP1Q9GZU7 261 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 TMEM133Q9H2Q1 129 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 SDF2L1Q9HCN8 221 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 GAGE12BA1L429 117 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 A1L4Q6 167 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 RBFOX2O43251 390 aaKnown RBP eCLIP10.22□□□□□ -0.77
GGPS1-202ENST00000358966 IGLC2P0DOY2 106 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 IGLC3P0DOY3 106 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 TAS2R30P59541 319 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 TMEM14EPQ6UXP3 125 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 TCTEX1D1Q8N7M0 179 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 OR10W1Q8NGF6 305 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 OR4B1Q8NGF8 309 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 OR51G1Q8NGK1 321 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 HARBI1Q96MB7 349 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 IMMP2LQ96T52 175 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 DOPEY2Q9Y3R5 2298 aa10.22□□□□□ -0.77
GGPS1-202ENST00000358966 C15orf62A8K5M9 175 aa10.21□□□□□ -0.77
GGPS1-202ENST00000358966 E7EUB6 86 aa10.21□□□□□ -0.77
GGPS1-202ENST00000358966 APELAP0DMC3 54 aa10.21□□□□□ -0.77
GGPS1-202ENST00000358966 CNTFRP26992 372 aa10.21□□□□□ -0.77
GGPS1-202ENST00000358966 CTRLP40313 264 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms