RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 YPEL2Q96QA6 119 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 ZGRF1Q86YA3 2104 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 APC2O95996 2303 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 TRAV17A0A0B4J275 112 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 GGTLC3B5MD39 225 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 BMPR1BO00238 502 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 PROP1O75360 226 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 CNIH1O95406 144 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 HIST1H1EP10412 219 aaKnown RBP5.39□□□□□ -1.55
CSDE1-203ENST00000358528 ZNF138P52744 262 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 CX3CL1P78423 397 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 SLAQ13239 276 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 TMEM177Q53S58 311 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 LINC00305Q7Z4B0 112 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 KIR3DL3Q8N743 410 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 WDR31Q8NA23 367 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 OR8B3Q8NGG8 313 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 C20orf144Q9BQM9 153 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 CLEC7AQ9BXN2 247 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 MRPL20Q9BYC9 149 aaKnown RBP5.39□□□□□ -1.55
CSDE1-203ENST00000358528 GP6Q9HCN6 339 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 DCAF16Q9NXF7 216 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 TRBV9A0A0B4J1U6 114 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 MUC21A0A0G2JKD1 596 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 MUC21A0A140T8X8 626 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 LOC389332A0A1B0GUA5 103 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 CORTO00230 105 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 TMEM11P17152 192 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 KIR2DL2P43627 348 aaPredicted RBP5.39□□□□□ -1.55
CSDE1-203ENST00000358528 UQCRFS1P47985 274 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 TBR1Q16650 682 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 MUC21Q5SSG8 566 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 PRNTQ86SH4 94 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 OR1L4Q8NGR5 311 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 TSKUQ8WUA8 353 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 RNF114Q9Y508 228 aa5.39□□□□□ -1.55
CSDE1-203ENST00000358528 KBTBD11-OT1A0A1B0GTJ5 212 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 SPAARA0A1B0GVQ0 90 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 IZUMO1RA6ND01 250 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 C15orf65H3BRN8 121 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 PEX7O00628 323 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 ISLRO14498 428 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 HYPMO75409 117 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 MMP23AO75900 390 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 CT45A6P0DMU7 189 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 CT45A5P0DMU8 189 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 CT45A7P0DMV0 189 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 COX19Q49B96 90 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 TMEM136Q6ZRR5 245 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 OSTCQ9NRP0 149 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 TP53TG3Q9ULZ0 132 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 TEX50A0A1B0GTY4 177 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 OR4C46A6NHA9 309 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 SRRM5B3KS81 715 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 J3QW42 95 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 SS18L1O75177 396 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-203ENST00000358528 LEPROTL1O95214 131 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 NUDT3O95989 172 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 AREGP15514 252 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 BTF3P20290 206 aaKnown RBP5.38□□□□□ -1.55
CSDE1-203ENST00000358528 COX7A1P24310 79 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 ZNF841Q6ZN19 808 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 TEX43Q6ZNM6 134 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 DEFB123Q8N688 67 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 NUDT10Q8NFP7 164 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 OR52E5Q8NH55 327 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 PRSS3P2Q8NHM4 247 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 NUDT11Q96G61 164 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 GSX1Q9H4S2 264 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-203ENST00000358528 ASCL3Q9NQ33 180 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 SLC25A10Q9UBX3 287 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-203ENST00000358528 hDV102S1A0JD36 115 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 C9JCJ5 164 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 VWC2Q2TAL6 325 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 MORN5Q5VZ52 161 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 MDS2Q8NDY4 140 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 DEFB124Q8NES8 71 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 OR8A1Q8NGG7 326 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 TNFRSF19Q9NS68 423 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 S4R3C0 116 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 PRR33A8MZF0 331 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 UPK2O00526 184 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 DLL1O00548 723 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 PRRX1P54821 245 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 FAM27E3Q08E93 113 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 VMA21Q3ZAQ7 101 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 C19orf35Q6ZS72 473 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 FAM90A1Q86YD7 464 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 ZADH2Q8N4Q0 377 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 CHRDL1Q9BU40 450 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 ZNF430Q9H8G1 570 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-203ENST00000358528 TP73-AS1Q9UF72 201 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 ZFP30Q9Y2G7 519 aa5.38□□□□□ -1.55
CSDE1-203ENST00000358528 P0C879 139 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 CA7P43166 264 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 DLX1P56177 255 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 SSBP2P81877 361 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-203ENST00000358528 MALRD1Q5VYJ5 2156 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 FA2HQ7L5A8 372 aa5.37□□□□□ -1.55
CSDE1-203ENST00000358528 NUP35Q8NFH5 326 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms