RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 TMEM50AO95807 157 aa5.49□□□□□ -1.53
TRIM38-201ENST00000357085 RPL7P18124 248 aaKnown RBP5.49□□□□□ -1.53
TRIM38-201ENST00000357085 C1orf61Q13536 156 aa5.49□□□□□ -1.53
TRIM38-201ENST00000357085 TPRX1Q8N7U7 411 aa5.49□□□□□ -1.53
TRIM38-201ENST00000357085 OR4C13Q8NGP0 309 aa5.49□□□□□ -1.53
TRIM38-201ENST00000357085 RNF186Q9NXI6 227 aa5.49□□□□□ -1.53
TRIM38-201ENST00000357085 TMEM189A5PLL7 270 aa5.49□□□□□ -1.53
TRIM38-201ENST00000357085 ZNF137PP52743 207 aa5.49□□□□□ -1.53
TRIM38-201ENST00000357085 NXPH1P58417 271 aa5.49□□□□□ -1.53
TRIM38-201ENST00000357085 PSG4Q00888 419 aa5.49□□□□□ -1.53
TRIM38-201ENST00000357085 ZFP36L1Q07352 338 aaKnown RBP5.49□□□□□ -1.53
TRIM38-201ENST00000357085 Q1RN00 199 aa5.49□□□□□ -1.53
TRIM38-201ENST00000357085 DEFB133Q30KQ1 61 aa5.49□□□□□ -1.53
TRIM38-201ENST00000357085 SARAFQ96BY9 339 aa5.49□□□□□ -1.53
TRIM38-201ENST00000357085 CITED2Q99967 270 aaPredicted RBP5.49□□□□□ -1.53
TRIM38-201ENST00000357085 F2Z2F3 143 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 IGLL1P15814 213 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 RNASE7Q9H1E1 156 aaKnown RBP5.48□□□□□ -1.53
TRIM38-201ENST00000357085 R4GN57 208 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 CLPSP04118 112 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 LTBRP36941 435 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 PRCDQ00LT1 54 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 KRTCAP3Q53RY4 240 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 PRSS8Q16651 343 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 MORN3Q6PF18 240 aaPredicted RBP5.48□□□□□ -1.53
TRIM38-201ENST00000357085 OR11H6Q8NGC7 330 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 FLYWCH2Q96CP2 140 aaKnown RBP5.48□□□□□ -1.53
TRIM38-201ENST00000357085 ZNF479Q96JC4 524 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 IGHV5-51A0A0C4DH38 117 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 C2CD4DB7Z1M9 353 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 ANOS1P23352 680 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 SRSF9Q13242 221 aaKnown RBP eCLIP5.48□□□□□ -1.53
TRIM38-201ENST00000357085 LHX8Q68G74 356 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 ZNF562Q6V9R5 426 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 SRSF8Q9BRL6 282 aaKnown RBP5.48□□□□□ -1.53
TRIM38-201ENST00000357085 SSBP3Q9BWW4 388 aaPredicted RBP5.48□□□□□ -1.53
TRIM38-201ENST00000357085 SHISA8B8ZZ34 492 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 SNAI2O43623 268 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 NDUFB8O95169 186 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 LCNL1Q6ZST4 164 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 IFI27L2Q9H2X8 130 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 ZNF355PQ9NSJ1 428 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 K7ESF4 209 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 SMAD7O15105 426 aaKnown RBP5.48□□□□□ -1.53
TRIM38-201ENST00000357085 IZUMO4Q1ZYL8 232 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 GAB4Q2WGN9 574 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 C6orf15Q6UXA7 325 aaPredicted RBP5.48□□□□□ -1.53
TRIM38-201ENST00000357085 hDV102S1A0JD36 115 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 SPINK8P0C7L1 97 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 CACNG7P62955 275 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 V9GYV3 84 aa5.48□□□□□ -1.53
TRIM38-201ENST00000357085 C21orf140B9A014 251 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 DPM2O94777 84 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 CHCHD2Q9Y6H1 151 aaPredicted RBP5.47□□□□□ -1.53
TRIM38-201ENST00000357085 IGKV1D-13A0A0B4J2D9 117 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 IGKV1-13P0DP09 117 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 CKS2P33552 79 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 HAPLN4Q86UW8 402 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 FAM169BQ8N8A8 192 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 NABP1Q96AH0 204 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 PRELID3AQ96N28 172 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 LOXL2Q9Y4K0 774 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 ACACAQ13085 2346 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 A0A1W2PPM0 123 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 PLAURQ03405 335 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 TNXAQ16473 311 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 BHLHA15Q7RTS1 189 aaPredicted RBP5.47□□□□□ -1.53
TRIM38-201ENST00000357085 FAM60AQ9NP50 221 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 TAX1BP3O14907 124 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 CXCL13O43927 109 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 PATE1Q8WXA2 126 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 TSSC4Q9Y5U2 329 aaPredicted RBP5.47□□□□□ -1.53
TRIM38-201ENST00000357085 NUPR1O60356 82 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 ZIC3O60481 467 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 DUTP33316 252 aaKnown RBP5.47□□□□□ -1.53
TRIM38-201ENST00000357085 ZNF775Q96BV0 537 aaPredicted RBP5.47□□□□□ -1.53
TRIM38-201ENST00000357085 TRGV9Q99603 122 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 ZNF716A6NP11 495 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 H3BVH4 76 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 TCRBV4S1A1TA0A5B7 111 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 PVRIGQ6DKI7 326 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 LRRC29Q8WV35 223 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 LIME1Q9H400 295 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 PROCRQ9UNN8 238 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 ARFGEF3Q5TH69 2177 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 IGKV1-5P01602 117 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 SLC25A16P16260 332 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 PGLYRP4Q96LB8 373 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 PILRBQ9UKJ0 227 aa5.47□□□□□ -1.53
TRIM38-201ENST00000357085 IGHV3-20A0A0C4DH32 117 aa5.46□□□□□ -1.53
TRIM38-201ENST00000357085 H3BMG7 143 aa5.46□□□□□ -1.53
TRIM38-201ENST00000357085 FOXA3P55318 350 aaPredicted RBP5.46□□□□□ -1.53
TRIM38-201ENST00000357085 GUSBP1Q15486 140 aa5.46□□□□□ -1.53
TRIM38-201ENST00000357085 NACAE9PAV3 2078 aa5.46□□□□□ -1.53
TRIM38-201ENST00000357085 C3orf80F5H4A9 247 aa5.46□□□□□ -1.53
TRIM38-201ENST00000357085 PLXNB1O43157 2135 aa5.46□□□□□ -1.53
TRIM38-201ENST00000357085 EDDM3AQ14507 147 aa5.46□□□□□ -1.53
TRIM38-201ENST00000357085 RCHY1Q96PM5 261 aa5.46□□□□□ -1.53
TRIM38-201ENST00000357085 HIF1ANQ9NWT6 349 aa5.46□□□□□ -1.53
TRIM38-201ENST00000357085 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms