RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 ZNF320A2RRD8 509 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 I3L2K1 104 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 CST7O76096 145 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 MPC2O95563 127 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 OR8U8P0C7N1 319 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 SLC25A6P12236 298 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 OPRK1P41145 380 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 RAB11AP62491 216 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 RPL23AP62750 156 aaKnown RBP3.11□□□□□ -1.91
LIG4-201ENST00000356922 RHOGP84095 191 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 CYCSP99999 105 aaKnown RBP3.11□□□□□ -1.91
LIG4-201ENST00000356922 ZNF124Q15973 351 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 Q56UQ5 140 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 PVRIGQ6DKI7 326 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 OR8G2PQ6IF36 304 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 TMEM182Q6ZP80 229 aaPredicted RBP3.11□□□□□ -1.91
LIG4-201ENST00000356922 MYOZ3Q8TDC0 251 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 CCDC140Q96MF4 163 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 CITED1Q99966 193 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 F11RQ9Y624 299 aaKnown RBP3.11□□□□□ -1.91
LIG4-201ENST00000356922 IGSF23A1L1A6 192 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 PPP5D1E7EU14 171 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 SCO1O75880 301 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 METTL15P1P0C7V9 234 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 MAS1LP35410 378 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 C21orf62-AS1Q17RA5 79 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 C15orf32Q32M92 178 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 TEX38Q6PEX7 206 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 C8orf86Q6ZUL3 223 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 ZNF767PQ75MW2 155 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 NOXA1Q86UR1 476 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 ZNF491Q8N8L2 437 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 RNF152Q8N8N0 203 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 FAM110DQ8TAY7 271 aaPredicted RBP3.11□□□□□ -1.91
LIG4-201ENST00000356922 C12orf57Q99622 126 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 CHRDL1Q9BU40 450 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 SAV1Q9H4B6 383 aaPredicted RBP3.11□□□□□ -1.91
LIG4-201ENST00000356922 CACFD1Q9UGQ2 172 aa3.11□□□□□ -1.91
LIG4-201ENST00000356922 NPIPB5A8MRT5 1133 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 DEDDO75618 318 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 PET100P0DJ07 73 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 ADMP35318 185 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 RPL35P42766 123 aaKnown RBP3.1□□□□□ -1.91
LIG4-201ENST00000356922 RPL15P61313 204 aaKnown RBP3.1□□□□□ -1.91
LIG4-201ENST00000356922 RELQ04864 619 aaPredicted RBP3.1□□□□□ -1.91
LIG4-201ENST00000356922 TOR2AQ5JU69 321 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 ACSM6Q6P461 480 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 TMEM217Q8N7C4 229 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 OR2T35Q8NGX2 323 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 ACY3Q96HD9 319 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 NMES1Q9C002 83 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 ZFP57Q9NU63 452 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 FBXL7Q9UJT9 491 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 FXYD6-FXYD2A0A087WZ82 144 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 A0A1B0GUS0 222 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 INS-IGF2F8WCM5 200 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 MT-CO2P00403 227 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 CLEC3BP05452 202 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 AKR1C1Q04828 323 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 ATP5G2Q06055 141 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 KLK9Q2XQG4 91 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 LINC01559Q495D7 138 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 PRSS54Q6PEW0 395 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 INO80EQ8NBZ0 244 aaPredicted RBP3.1□□□□□ -1.91
LIG4-201ENST00000356922 MARC2Q969Z3 335 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 CIB3Q96Q77 187 aaPredicted RBP3.1□□□□□ -1.91
LIG4-201ENST00000356922 C20orf24Q9BUV8 137 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 WFDC1Q9HC57 220 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 ZNF580Q9UK33 172 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 KLK9Q9UKQ9 250 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 CBY1Q9Y3M2 126 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 S100A9P06702 114 aaKnown RBP3.1□□□□□ -1.91
LIG4-201ENST00000356922 GATA2P23769 480 aaPredicted RBP3.1□□□□□ -1.91
LIG4-201ENST00000356922 RPL11P62913 178 aaKnown RBP3.1□□□□□ -1.91
LIG4-201ENST00000356922 TMEM14EPQ6UXP3 125 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 ETV3LQ6ZN32 361 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 TMEM252Q8N6L7 170 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 SLC24A4Q8NFF2 622 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 OR1P1Q8NH06 330 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 RAX2Q96IS3 184 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 PPP1R14DQ9NXH3 145 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 PSENENQ9NZ42 101 aa3.1□□□□□ -1.91
LIG4-201ENST00000356922 STRAPQ9Y3F4 350 aaKnown RBP3.1□□□□□ -1.91
LIG4-201ENST00000356922 IGKV1D-37A0A075B6S9 117 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 A0A0G2JLM5 398 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 RNF222A6NCQ9 220 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 OR2T8A6NH00 312 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 F8W036 122 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 GATCO43716 136 aaKnown RBP3.09□□□□□ -1.91
LIG4-201ENST00000356922 GNG7O60262 68 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 CTSGP08311 255 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 ZNF90Q03938 601 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 GAMTQ14353 236 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 OXLD1Q5BKU9 147 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 CLEC19AQ6UXS0 136 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 UNQ9165/PRO28630Q6UXU0 137 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 KLHL30-AS1Q8NEE0 82 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 ST8SIA2Q92186 375 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 SMIM8Q96KF7 97 aa3.09□□□□□ -1.91
LIG4-201ENST00000356922 FBN3Q75N90 2809 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms