RNA–Protein interactions for RNA: ENST00000355231.9

HMBOX1-202, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-202ENST00000355231 SAP30LQ9HAJ7 183 aa4.04□□□□□ -1.76
HMBOX1-202ENST00000355231 YTHDF2Q9Y5A9 579 aaKnown RBP4.04□□□□□ -1.76
HMBOX1-202ENST00000355231 TIMM9Q9Y5J7 89 aa4.04□□□□□ -1.76
HMBOX1-202ENST00000355231 SPENQ96T58 3664 aaKnown RBP4.04□□□□□ -1.76
HMBOX1-202ENST00000355231 TNRC6AQ8NDV7 1962 aaKnown RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 A0A1B0GUS0 222 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 FAM90A26D6RGX4 464 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 OR2H2O95918 312 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 SP1P08047 785 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 CELA3BP08861 270 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 GLRXP35754 106 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 VDAC2P45880 294 aaPredicted RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 DAP3P51398 398 aaKnown RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 CX3CL1P78423 397 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 POU3F1Q03052 451 aaPredicted RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 KLF5Q13887 457 aaPredicted RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 HES1Q14469 280 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 MRPL23Q16540 153 aaKnown RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 MS4A18Q3C1V0 323 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 LINC01590Q5TEZ4 76 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 CBLN3Q6UW01 205 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 RBPMS2Q6ZRY4 209 aaKnown RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 SPATA12Q7Z6I5 190 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 OR13A1Q8NGR1 328 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 TSKUQ8WUA8 353 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 LHX4Q969G2 390 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 NKD1Q969G9 470 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 JMJD8Q96S16 334 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 ZNF665Q9H7R5 613 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 RCL1Q9Y2P8 373 aaKnown RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 V9GYY9 64 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 HECTD1Q9ULT8 2610 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 UTP20O75691 2785 aaKnown RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 UBR5O95071 2799 aaPredicted RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 TLN1Q9Y490 2541 aaKnown RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 PRRC2CQ9Y520 2896 aaKnown RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 UNC13CQ8NB66 2214 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 DOPEY1Q5JWR5 2465 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 CTXND1A0A1B0GTU2 59 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 TEX50A0A1B0GTY4 177 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 A1L4Q6 167 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 GGTLC3B5MD39 225 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 C9JAW5 83 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 AMY1AP04745 511 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 ASAH2BP0C7U1 165 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 JMJD7P0C870 316 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 AMY2BP19961 511 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 PTGDSP41222 190 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 NKX2-1P43699 371 aaPredicted RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 ZNF133P52736 654 aaPredicted RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 TAS2R45P59539 299 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 HBG1P69891 147 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 HBG2P69892 147 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 EIF3IQ13347 325 aaKnown RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 CEACAM16Q2WEN9 425 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 KIAA1644Q3SXP7 199 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 TIGITQ495A1 244 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 MORN3Q6PF18 240 aaPredicted RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 ZNF474Q6S9Z5 364 aaPredicted RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 TMEM252Q8N6L7 170 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 ZNF645Q8N7E2 425 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 OR5C1Q8NGR4 320 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 OR6K6Q8NGW6 343 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 RNF138Q8WVD3 245 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 GTSF1Q8WW33 167 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 PPDPFLQ8WWR9 84 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 RPEQ96AT9 228 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 CHCHD1Q96BP2 118 aaKnown RBP4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 ZNF524Q96C55 264 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 PRADC1Q9BSG0 188 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 CDIP1Q9H305 208 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 ZNF286AQ9HBT8 521 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 KCNIP2Q9NS61 270 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 MDFICQ9P1T7 246 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 HIGD1AQ9Y241 93 aa4.03□□□□□ -1.76
HMBOX1-202ENST00000355231 PTPN13Q12923 2485 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 C5orf49A4QMS7 147 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 IGHV3-7P01780 117 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 BGLAPP02818 100 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 MT-ATP8P03928 68 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 ATP5G1P05496 136 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 GYPBP06028 91 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 CRYGDP07320 174 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 NHLRC4P0CG21 123 aaPredicted RBP4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 LIFP15018 202 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 CBLN1P23435 193 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 BLVRBP30043 206 aaPredicted RBP4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 NTF4P34130 210 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 ATP5G3P48201 142 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 ATP5G2Q06055 141 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 ABCA11PQ4W5N1 156 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 OTPQ5XKR4 325 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 FAM19A5Q7Z5A7 132 aaPredicted RBP4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 ATOH7Q8N100 152 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 RFLNBQ8N5W9 214 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 TMEM178AQ8NBL3 297 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 NFAM1Q8NET5 270 aaPredicted RBP4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 ZPLD1Q8TCW7 415 aa4.02□□□□□ -1.77
HMBOX1-202ENST00000355231 CT55Q8WUE5 264 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms