RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 E7EUB6 86 aa19.85■□□□□ 0.77
CPNE1-202ENST00000352393 ZNF324O75467 553 aaPredicted RBP19.85■□□□□ 0.77
CPNE1-202ENST00000352393 CA1P00915 261 aaPredicted RBP19.85■□□□□ 0.77
CPNE1-202ENST00000352393 USF1P22415 310 aaPredicted RBP19.85■□□□□ 0.77
CPNE1-202ENST00000352393 CD40P25942 277 aa19.85■□□□□ 0.77
CPNE1-202ENST00000352393 MEF2CQ06413 473 aaPredicted RBP19.85■□□□□ 0.77
CPNE1-202ENST00000352393 FAM231DQ6ZW35 169 aa19.85■□□□□ 0.77
CPNE1-202ENST00000352393 TMEM167AQ8TBQ9 72 aa19.85■□□□□ 0.77
CPNE1-202ENST00000352393 WIPF2Q8TF74 440 aaPredicted RBP19.85■□□□□ 0.77
CPNE1-202ENST00000352393 ICE1Q9Y2F5 2266 aa19.85■□□□□ 0.77
CPNE1-202ENST00000352393 A0A1W2PN81 502 aa19.84■□□□□ 0.77
CPNE1-202ENST00000352393 CGB1A6NKQ9 187 aa19.84■□□□□ 0.77
CPNE1-202ENST00000352393 PMCHP20382 165 aa19.84■□□□□ 0.77
CPNE1-202ENST00000352393 CTRLP40313 264 aa19.84■□□□□ 0.77
CPNE1-202ENST00000352393 ZNF329Q86UD4 541 aa19.84■□□□□ 0.77
CPNE1-202ENST00000352393 FAM168AQ92567 244 aa19.84■□□□□ 0.77
CPNE1-202ENST00000352393 LINC00479Q96M42 142 aa19.84■□□□□ 0.77
CPNE1-202ENST00000352393 FNDC4Q9H6D8 234 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-202ENST00000352393 ZNF430Q9H8G1 570 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-202ENST00000352393 ZNF355PQ9NSJ1 428 aa19.84■□□□□ 0.77
CPNE1-202ENST00000352393 AMMECR1Q9Y4X0 333 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-202ENST00000352393 COX7A2P2O60397 106 aa19.84■□□□□ 0.77
CPNE1-202ENST00000352393 APCSP02743 223 aa19.84■□□□□ 0.77
CPNE1-202ENST00000352393 REG1AP05451 166 aa19.84■□□□□ 0.77
CPNE1-202ENST00000352393 PYYP10082 97 aa19.84■□□□□ 0.77
CPNE1-202ENST00000352393 ZNF25P17030 456 aaPredicted RBP19.84■□□□□ 0.77
CPNE1-202ENST00000352393 WT1-ASQ06250 92 aa19.83■□□□□ 0.77
CPNE1-202ENST00000352393 RASL11AQ6T310 242 aa19.83■□□□□ 0.77
CPNE1-202ENST00000352393 PATE2Q6UY27 113 aa19.83■□□□□ 0.77
CPNE1-202ENST00000352393 NIT1Q86X76 327 aa19.83■□□□□ 0.77
CPNE1-202ENST00000352393 NUP37Q8NFH4 326 aa19.83■□□□□ 0.77
CPNE1-202ENST00000352393 OR4A5Q8NH83 315 aa19.83■□□□□ 0.77
CPNE1-202ENST00000352393 PAXXQ9BUH6 204 aa19.83■□□□□ 0.77
CPNE1-202ENST00000352393 CCL3L1P16619 93 aa19.82■□□□□ 0.76
CPNE1-202ENST00000352393 C10orf113Q5VZT2 155 aa19.82■□□□□ 0.76
CPNE1-202ENST00000352393 OR1L4Q8NGR5 311 aa19.82■□□□□ 0.76
CPNE1-202ENST00000352393 FLYWCH2Q96CP2 140 aaKnown RBP19.82■□□□□ 0.76
CPNE1-202ENST00000352393 IGKV1D-37A0A075B6S9 117 aa19.82■□□□□ 0.76
CPNE1-202ENST00000352393 PEX7O00628 323 aa19.82■□□□□ 0.76
CPNE1-202ENST00000352393 FCN3O75636 299 aa19.82■□□□□ 0.76
CPNE1-202ENST00000352393 FSTL3O95633 263 aa19.82■□□□□ 0.76
CPNE1-202ENST00000352393 FAM27E3Q08E93 113 aa19.82■□□□□ 0.76
CPNE1-202ENST00000352393 SLAQ13239 276 aa19.82■□□□□ 0.76
CPNE1-202ENST00000352393 SSBP3Q9BWW4 388 aaPredicted RBP19.82■□□□□ 0.76
CPNE1-202ENST00000352393 TCRBV4S1A1TA0A5B7 111 aa19.81■□□□□ 0.76
CPNE1-202ENST00000352393 REG1BP48304 166 aa19.81■□□□□ 0.76
CPNE1-202ENST00000352393 IGFL3Q6UXB1 125 aa19.81■□□□□ 0.76
CPNE1-202ENST00000352393 THAP8Q8NA92 274 aa19.81■□□□□ 0.76
CPNE1-202ENST00000352393 ZNF331Q9NQX6 463 aaPredicted RBP19.81■□□□□ 0.76
CPNE1-202ENST00000352393 CASP6P55212 293 aa19.81■□□□□ 0.76
CPNE1-202ENST00000352393 BPIFB3P59826 476 aa19.81■□□□□ 0.76
CPNE1-202ENST00000352393 C10orf55Q5SWW7 151 aa19.81■□□□□ 0.76
CPNE1-202ENST00000352393 ASPHD1Q5U4P2 390 aa19.81■□□□□ 0.76
CPNE1-202ENST00000352393 TSKUQ8WUA8 353 aa19.81■□□□□ 0.76
CPNE1-202ENST00000352393 FXYD5Q96DB9 178 aa19.81■□□□□ 0.76
CPNE1-202ENST00000352393 MRPL27Q9P0M9 148 aaKnown RBP19.81■□□□□ 0.76
CPNE1-202ENST00000352393 A6NNC1 897 aa19.8■□□□□ 0.76
CPNE1-202ENST00000352393 CEACAM8P31997 349 aaPredicted RBP19.8■□□□□ 0.76
CPNE1-202ENST00000352393 CCL8P80075 99 aa19.8■□□□□ 0.76
CPNE1-202ENST00000352393 PDPNQ86YL7 162 aa19.8■□□□□ 0.76
CPNE1-202ENST00000352393 OR4C13Q8NGP0 309 aa19.8■□□□□ 0.76
CPNE1-202ENST00000352393 VSTM2AQ8TAG5 236 aa19.8■□□□□ 0.76
CPNE1-202ENST00000352393 C18orf32Q8TCD1 76 aa19.8■□□□□ 0.76
CPNE1-202ENST00000352393 NPIPB3Q92617 1050 aa19.8■□□□□ 0.76
CPNE1-202ENST00000352393 FAM71F2Q6NXP2 309 aa19.79■□□□□ 0.76
CPNE1-202ENST00000352393 GRAMD2BQ96HH9 432 aa19.79■□□□□ 0.76
CPNE1-202ENST00000352393 TMEM208Q9BTX3 173 aa19.79■□□□□ 0.76
CPNE1-202ENST00000352393 NAV3Q8IVL0 2385 aa19.79■□□□□ 0.76
CPNE1-202ENST00000352393 IGLV2-23P01705 113 aa19.79■□□□□ 0.76
CPNE1-202ENST00000352393 C3orf79P0CE67 100 aa19.79■□□□□ 0.76
CPNE1-202ENST00000352393 TNFRSF1AP19438 455 aa19.79■□□□□ 0.76
CPNE1-202ENST00000352393 PRRX1P54821 245 aa19.79■□□□□ 0.76
CPNE1-202ENST00000352393 TMEM200BQ69YZ2 307 aa19.79■□□□□ 0.76
CPNE1-202ENST00000352393 TMEM68Q96MH6 324 aa19.79■□□□□ 0.76
CPNE1-202ENST00000352393 C7orf69Q9H7B7 122 aa19.79■□□□□ 0.76
CPNE1-202ENST00000352393 ZFHX4Q86UP3 3567 aa19.78■□□□□ 0.76
CPNE1-202ENST00000352393 MYCNOSP40205 109 aa19.78■□□□□ 0.76
CPNE1-202ENST00000352393 SPATA45Q537H7 98 aa19.78■□□□□ 0.76
CPNE1-202ENST00000352393 MRPL36Q9P0J6 103 aaKnown RBP19.78■□□□□ 0.76
CPNE1-202ENST00000352393 DLEU1O43261 78 aa19.78■□□□□ 0.76
CPNE1-202ENST00000352393 TBR1Q16650 682 aa19.78■□□□□ 0.76
CPNE1-202ENST00000352393 GDF5OSQ5U4N7 250 aa19.78■□□□□ 0.76
CPNE1-202ENST00000352393 IGF2-ASQ6U949 168 aa19.78■□□□□ 0.76
CPNE1-202ENST00000352393 NUDT10Q8NFP7 164 aa19.78■□□□□ 0.76
CPNE1-202ENST00000352393 ZNF596Q8TC21 504 aa19.78■□□□□ 0.76
CPNE1-202ENST00000352393 NUDT11Q96G61 164 aa19.78■□□□□ 0.76
CPNE1-202ENST00000352393 LPAR2Q9HBW0 351 aa19.78■□□□□ 0.76
CPNE1-202ENST00000352393 TRAV34A0A0B4J273 112 aa19.77■□□□□ 0.76
CPNE1-202ENST00000352393 SUB1P53999 127 aaKnown RBP eCLIP19.77■□□□□ 0.761e-12■■■■□ 22.8
CPNE1-202ENST00000352393 GAGE1Q13065 139 aa19.77■□□□□ 0.76
CPNE1-202ENST00000352393 DIAPH2-AS1Q14236 149 aa19.77■□□□□ 0.76
CPNE1-202ENST00000352393 C19orf35Q6ZS72 473 aa19.77■□□□□ 0.76
CPNE1-202ENST00000352393 Q6ZS92 163 aa19.77■□□□□ 0.76
CPNE1-202ENST00000352393 SPACA3Q8IXA5 215 aa19.77■□□□□ 0.76
CPNE1-202ENST00000352393 NUP35Q8NFH5 326 aa19.77■□□□□ 0.76
CPNE1-202ENST00000352393 MFAP2P55001 183 aa19.76■□□□□ 0.75
CPNE1-202ENST00000352393 FAM19A2Q8N3H0 131 aa19.76■□□□□ 0.75
CPNE1-202ENST00000352393 LINC00311Q8N616 119 aa19.76■□□□□ 0.75
CPNE1-202ENST00000352393 C17orf100A8MU93 164 aa19.76■□□□□ 0.75
CPNE1-202ENST00000352393 C8orf31Q8N9H6 132 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms