RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 PRCDQ00LT1 54 aa13.28□□□□□ -0.28
PTPN11-201ENST00000351677 PARD6GQ9BYG4 376 aaPredicted RBP13.28□□□□□ -0.28
PTPN11-201ENST00000351677 WDR81Q562E7 1941 aa13.28□□□□□ -0.28
PTPN11-201ENST00000351677 MYLKQ15746 1914 aa13.28□□□□□ -0.28
PTPN11-201ENST00000351677 HGFACQ04756 655 aa13.28□□□□□ -0.28
PTPN11-201ENST00000351677 OCC1Q8TAD7 63 aa13.28□□□□□ -0.28
PTPN11-201ENST00000351677 C7orf69Q9H7B7 122 aa13.28□□□□□ -0.28
PTPN11-201ENST00000351677 TRAV8-6A0A0B4J262 113 aa13.27□□□□□ -0.28
PTPN11-201ENST00000351677 PLP1P60201 277 aa13.27□□□□□ -0.28
PTPN11-201ENST00000351677 C1QL4Q86Z23 238 aa13.27□□□□□ -0.28
PTPN11-201ENST00000351677 IGKV3OR2-268A0A0C4DH90 116 aa13.27□□□□□ -0.28
PTPN11-201ENST00000351677 SRSF7Q16629 238 aaKnown RBP eCLIP13.27□□□□□ -0.28
PTPN11-201ENST00000351677 WDR83OSQ9Y284 106 aa13.27□□□□□ -0.28
PTPN11-201ENST00000351677 TCRBV4S1A1TA0A5B7 111 aa13.27□□□□□ -0.29
PTPN11-201ENST00000351677 CEACAM4O75871 244 aa13.27□□□□□ -0.29
PTPN11-201ENST00000351677 CD5P06127 495 aa13.27□□□□□ -0.29
PTPN11-201ENST00000351677 SRRM5B3KS81 715 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 C10orf55Q5SWW7 151 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 CD177Q8N6Q3 437 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 TMEM170AQ8WVE7 144 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 OTORQ9NRC9 128 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 PLSCR4Q9NRQ2 329 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 PHF3Q92576 2039 aaKnown RBP13.26□□□□□ -0.29
PTPN11-201ENST00000351677 NCOR1O75376 2440 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 ASIPP42127 132 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 B3GALT5-AS1P59052 145 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 TRAV5A0A0B4J249 113 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 CSRP1P21291 193 aaKnown RBP13.26□□□□□ -0.29
PTPN11-201ENST00000351677 SRSF6Q13247 344 aaKnown RBP13.26□□□□□ -0.29
PTPN11-201ENST00000351677 PTPRDP23468 1912 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 FER1L6-AS1Q8NA97 138 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 HIST1H2BKO60814 126 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 IGKV1-5P01602 117 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 HIST1H2BJP06899 126 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 HIST1H2BOP23527 126 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 HIST1H2BBP33778 126 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 HIST1H2BDP58876 126 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 HIST1H2BCP62807 126 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 HIST2H2BEQ16778 126 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.26□□□□□ -0.29
PTPN11-201ENST00000351677 TREML4Q6UXN2 200 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 MBD3L1Q8WWY6 194 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 HIST1H2BHQ93079 126 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 HIST1H2BNQ99877 126 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 HIST1H2BMQ99879 126 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 EPDR1Q9UM22 224 aa13.26□□□□□ -0.29
PTPN11-201ENST00000351677 TIMM23O14925 209 aa13.25□□□□□ -0.29
PTPN11-201ENST00000351677 CIARTQ8N365 385 aaPredicted RBP13.25□□□□□ -0.29
PTPN11-201ENST00000351677 TRAV9-1A0A075B6T8 112 aa13.25□□□□□ -0.29
PTPN11-201ENST00000351677 SPACA3Q8IXA5 215 aa13.25□□□□□ -0.29
PTPN11-201ENST00000351677 AKAP6Q13023 2319 aa13.25□□□□□ -0.29
PTPN11-201ENST00000351677 RNASE4P34096 147 aaKnown RBP13.25□□□□□ -0.29
PTPN11-201ENST00000351677 ADIPOQQ15848 244 aa13.25□□□□□ -0.29
PTPN11-201ENST00000351677 BMPERQ8N8U9 685 aa13.25□□□□□ -0.29
PTPN11-201ENST00000351677 NMSQ5H8A3 153 aa13.25□□□□□ -0.29
PTPN11-201ENST00000351677 RNF125Q96EQ8 232 aa13.25□□□□□ -0.29
PTPN11-201ENST00000351677 E9PLN8 166 aa13.25□□□□□ -0.29
PTPN11-201ENST00000351677 KIR3DL3Q8N743 410 aa13.25□□□□□ -0.29
PTPN11-201ENST00000351677 COX6CP09669 75 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 FAM181BA6NEQ2 426 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 CA1P00915 261 aaPredicted RBP13.24□□□□□ -0.29
PTPN11-201ENST00000351677 SPATA31B1PQ5VZV4 182 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 TRAV3A0A0B4J244 114 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 MLNRO43193 412 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 TMEM42Q69YG0 159 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 HEPN1Q6WQI6 88 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 A0A0G2JLM5 398 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 LINC00205P59089 165 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 TMEM170BQ5T4T1 132 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 PMCHL2Q9BQD1 86 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 REG4Q9BYZ8 158 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 LINC00587B1AMM8 73 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 CXCL1P09341 107 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 PLAURQ03405 335 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 GLMPQ8WWB7 406 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 NRN1Q9NPD7 142 aa13.24□□□□□ -0.29
PTPN11-201ENST00000351677 RPUSD1Q9UJJ7 312 aaKnown RBP13.24□□□□□ -0.29
PTPN11-201ENST00000351677 SOX21Q9Y651 276 aaPredicted RBP13.24□□□□□ -0.29
PTPN11-201ENST00000351677 FER1L5A0AVI2 2057 aa13.23□□□□□ -0.29
PTPN11-201ENST00000351677 MGAMO43451 1857 aa13.23□□□□□ -0.29
PTPN11-201ENST00000351677 FAM71F2Q6NXP2 309 aa13.23□□□□□ -0.29
PTPN11-201ENST00000351677 TEX29Q8N6K0 151 aa13.23□□□□□ -0.29
PTPN11-201ENST00000351677 GGTLC1Q9BX51 225 aa13.23□□□□□ -0.29
PTPN11-201ENST00000351677 FAM90A9PA6NNJ1 464 aa13.23□□□□□ -0.29
PTPN11-201ENST00000351677 FOXC2Q99958 501 aa13.23□□□□□ -0.29
PTPN11-201ENST00000351677 RSPO3Q9BXY4 272 aaPredicted RBP13.23□□□□□ -0.29
PTPN11-201ENST00000351677 GEMIN7Q9H840 131 aaKnown RBP13.23□□□□□ -0.29
PTPN11-201ENST00000351677 COLCA1Q6ZS62 124 aa13.23□□□□□ -0.29
PTPN11-201ENST00000351677 MDS2Q8NDY4 140 aa13.23□□□□□ -0.29
PTPN11-201ENST00000351677 OR11H12B2RN74 326 aa13.23□□□□□ -0.29
PTPN11-201ENST00000351677 THBDP07204 575 aa13.23□□□□□ -0.29
PTPN11-201ENST00000351677 OR11H1Q8NG94 326 aa13.23□□□□□ -0.29
PTPN11-201ENST00000351677 OR11H2Q8NH07 326 aa13.23□□□□□ -0.29
PTPN11-201ENST00000351677 A0A1W2PRE2 83 aa13.22□□□□□ -0.29
PTPN11-201ENST00000351677 NPFFO15130 113 aa13.22□□□□□ -0.29
PTPN11-201ENST00000351677 TMEM200BQ69YZ2 307 aa13.22□□□□□ -0.29
PTPN11-201ENST00000351677 ORMDL3Q8N138 153 aa13.22□□□□□ -0.29
PTPN11-201ENST00000351677 POLEQ07864 2286 aa13.22□□□□□ -0.29
PTPN11-201ENST00000351677 LY6DQ14210 128 aa13.22□□□□□ -0.29
PTPN11-201ENST00000351677 SLC25A15Q9Y619 301 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms