RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 HCP5Q6MZN7 132 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 ATOH7Q8N100 152 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 CYB561D1Q8N8Q1 229 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 FOXI3A8MTJ6 420 aaPredicted RBP10.04□□□□□ -0.8
SMAD9-201ENST00000350148 Q6ZR03 302 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 METTL26Q96S19 204 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 NABP2Q9BQ15 211 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 FOLR2P14207 255 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 LCN2P80188 198 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 PSG9Q00887 426 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 ATP5G2Q06055 141 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 FGF16O43320 207 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 PRR30Q53SZ7 412 aaPredicted RBP10.04□□□□□ -0.8
SMAD9-201ENST00000350148 LYPD6Q86Y78 171 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 OR5A1Q8NGJ0 315 aa10.04□□□□□ -0.8
SMAD9-201ENST00000350148 COL4A2P08572 1712 aa10.03□□□□□ -0.8
SMAD9-201ENST00000350148 DNAJC13O75165 2243 aa10.03□□□□□ -0.8
SMAD9-201ENST00000350148 SGMS2Q8NHU3 365 aa10.03□□□□□ -0.8
SMAD9-201ENST00000350148 SGK494Q96LW2 274 aa10.03□□□□□ -0.8
SMAD9-201ENST00000350148 MT-ND6P03923 174 aa10.03□□□□□ -0.8
SMAD9-201ENST00000350148 IL6RP08887 468 aaPredicted RBP10.03□□□□□ -0.8
SMAD9-201ENST00000350148 IGHV2-26A0A0B4J1V2 119 aa10.03□□□□□ -0.8
SMAD9-201ENST00000350148 IGKV1D-33P01593 117 aa10.03□□□□□ -0.8
SMAD9-201ENST00000350148 IGKV1-33P01594 117 aa10.03□□□□□ -0.8
SMAD9-201ENST00000350148 TMEM249Q2WGJ8 235 aa10.03□□□□□ -0.8
SMAD9-201ENST00000350148 RPRMLQ8N4K4 120 aa10.03□□□□□ -0.8
SMAD9-201ENST00000350148 TBL2Q9Y4P3 447 aaKnown RBP10.03□□□□□ -0.8
SMAD9-201ENST00000350148 METRNQ9UJH8 293 aa10.03□□□□□ -0.8
SMAD9-201ENST00000350148 COL5A1P20908 1838 aaPredicted RBP10.03□□□□□ -0.8
SMAD9-201ENST00000350148 IL4P05112 153 aa10.02□□□□□ -0.8
SMAD9-201ENST00000350148 BEND2Q8NDZ0 799 aa10.02□□□□□ -0.8
SMAD9-201ENST00000350148 TMEM167AQ8TBQ9 72 aa10.02□□□□□ -0.8
SMAD9-201ENST00000350148 ARPC1AQ92747 370 aa10.02□□□□□ -0.8
SMAD9-201ENST00000350148 HIST1H4GQ99525 98 aa10.02□□□□□ -0.8
SMAD9-201ENST00000350148 SRSF8Q9BRL6 282 aaKnown RBP10.02□□□□□ -0.8
SMAD9-201ENST00000350148 RABAC1Q9UI14 185 aa10.02□□□□□ -0.8
SMAD9-201ENST00000350148 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.02□□□□□ -0.81
SMAD9-201ENST00000350148 DLX1P56177 255 aa10.02□□□□□ -0.81
SMAD9-201ENST00000350148 TMEM177Q53S58 311 aa10.02□□□□□ -0.81
SMAD9-201ENST00000350148 WDR86Q86TI4 376 aa10.02□□□□□ -0.81
SMAD9-201ENST00000350148 OR10AG1Q8NH19 301 aa10.02□□□□□ -0.81
SMAD9-201ENST00000350148 FBXL15Q9H469 300 aa10.02□□□□□ -0.81
SMAD9-201ENST00000350148 TMEM262E9PQX1 116 aa10.02□□□□□ -0.81
SMAD9-201ENST00000350148 FNDC10F2Z333 226 aa10.02□□□□□ -0.81
SMAD9-201ENST00000350148 CDPF1Q6NVV7 123 aa10.02□□□□□ -0.81
SMAD9-201ENST00000350148 ZCCHC24Q8N2G6 241 aaKnown RBP10.02□□□□□ -0.81
SMAD9-201ENST00000350148 ZNF418Q8TF45 676 aaPredicted RBP10.02□□□□□ -0.81
SMAD9-201ENST00000350148 NPIPB3Q92617 1050 aa10.02□□□□□ -0.81
SMAD9-201ENST00000350148 RPRMQ9NS64 109 aa10.02□□□□□ -0.81
SMAD9-201ENST00000350148 C1QTNF9BB2RNN3 333 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 H3BUT2 72 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 RAMP3O60896 148 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 VENTXO95231 258 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 HLA-DRB1P01911 266 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 C1QTNF9P0C862 333 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 ESDP10768 282 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 PPP1R27Q86WC6 154 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 RCC1LQ96I51 464 aaKnown RBP10.01□□□□□ -0.81
SMAD9-201ENST00000350148 SLC25A16P16260 332 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 GAGE2BQ13066 116 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 GAGE2EQ4V326 116 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 C2orf83Q53S99 150 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 BIVMQ86UB2 503 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 LINC00311Q8N616 119 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 SPANXA1Q9NS26 97 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 GAGE2DQ9UEU5 116 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 P01737 135 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 UBE2V1Q13404 147 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 FNDC4Q9H6D8 234 aaPredicted RBP10.01□□□□□ -0.81
SMAD9-201ENST00000350148 CRIM1Q9NZV1 1036 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 KAAG1Q9UBP8 84 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 A0A0G2JLM5 398 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 GCHFRP30047 84 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 WDR83OSQ9Y284 106 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 MED12Q93074 2177 aa10.01□□□□□ -0.81
SMAD9-201ENST00000350148 A1L4Q6 167 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 AURKAIP1Q9NWT8 199 aaPredicted RBP10□□□□□ -0.81
SMAD9-201ENST00000350148 LOXL3P58215 753 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 FAM106AQ4KMX7 169 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 H7C2G1 150 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 M0R3E3 92 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 LEPROTL1O95214 131 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 OR9G9P0C7N8 305 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 RIGQ13278 110 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 C5orf30Q96GV9 206 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 TDGF1P3P51864 188 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 JOSD1Q15040 202 aaPredicted RBP10□□□□□ -0.81
SMAD9-201ENST00000350148 TMEM14EPQ6UXP3 125 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 BOD1L2Q8IYS8 172 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 F11RQ9Y624 299 aaKnown RBP10□□□□□ -0.81
SMAD9-201ENST00000350148 RRHO14718 337 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 IGKV1-5P01602 117 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 WNT2P09544 360 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 ARL14EPLP0DKL9 152 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 PVRIGQ6DKI7 326 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 C7orf69Q9H7B7 122 aa10□□□□□ -0.81
SMAD9-201ENST00000350148 RIF1Q5UIP0 2472 aaKnown RBP9.99□□□□□ -0.81
SMAD9-201ENST00000350148 PHF3Q92576 2039 aaKnown RBP9.99□□□□□ -0.81
SMAD9-201ENST00000350148 MRPL52Q86TS9 123 aaKnown RBP9.99□□□□□ -0.81
SMAD9-201ENST00000350148 C8orf31Q8N9H6 132 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms