RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 FBLN7Q53RD9 439 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 SPATA31B1PQ5VZV4 182 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 ETFRF1Q6IPR1 90 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 SPNS3Q6ZMD2 512 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 CYP2G1PQ6ZSU1 146 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 C15orf54Q8N8G6 183 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 OR2T10Q8NGZ9 312 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 OR2T6Q8NHC8 308 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 C10orf105Q8TEF2 133 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 SRSF12Q8WXF0 261 aaKnown RBP5.51□□□□□ -1.53
TRIM55-203ENST00000350034 TVP23CQ96ET8 276 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 TXNDC17Q9BRA2 123 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 SDF2L1Q9HCN8 221 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 SEPSECSQ9HD40 501 aaKnown RBP5.51□□□□□ -1.53
TRIM55-203ENST00000350034 RPS10P5Q9NQ39 176 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 HILPDAQ9Y5L2 63 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 DMRT1Q9Y5R6 373 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 F11RQ9Y624 299 aaKnown RBP5.51□□□□□ -1.53
TRIM55-203ENST00000350034 NBASA2RRP1 2371 aa5.51□□□□□ -1.53
TRIM55-203ENST00000350034 TNCP24821 2201 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 TCRBV4S1A1TA0A5B7 111 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 B4DEV8 164 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 TSPAN9O75954 239 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 TOX4O94842 621 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 ARL14EPLP0DKL9 152 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 FOLR2P14207 255 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 GCHFRP30047 84 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 AKR1C3P42330 323 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 MMDQ15546 238 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 C5orf64Q2M2E5 130 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 HIST2H2BCQ6DN03 193 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 MIR17HGQ75NE6 70 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 TMEM116Q8NCL8 245 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 C17orf50Q8WW18 174 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 NPIPB3Q92617 1050 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 MALSU1Q96EH3 234 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 ZNF503Q96F45 646 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 RNF2Q99496 336 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 TRGV9Q99603 122 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 CCL19Q99731 98 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 NIPSNAP3BQ9BS92 247 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 C20orf24Q9BUV8 137 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 MRPL32Q9BYC8 188 aaKnown RBP5.5□□□□□ -1.53
TRIM55-203ENST00000350034 FUT9Q9Y231 359 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 ARL2-SNX15V9GYD0 113 aa5.5□□□□□ -1.53
TRIM55-203ENST00000350034 PRRC2CQ9Y520 2896 aaKnown RBP5.49□□□□□ -1.53
TRIM55-203ENST00000350034 NIPBLQ6KC79 2804 aaeCLIP5.49□□□□□ -1.53
TRIM55-203ENST00000350034 IGHV4-61A0A0C4DH41 118 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 A0A1W2PRD5 423 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 A0A1W2PRF3 423 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 A0A1W2PRM7 423 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 CXorf65A6NEN9 183 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 ZNF727A8MUV8 499 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 C11orf94C9JXX5 98 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 F6UZH7 168 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 I3L2K1 104 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 PDE6DO43924 150 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 CLN5O75503 358 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 REG1AP05451 166 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 CTRB1P17538 263 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 GATA2P23769 480 aaPredicted RBP5.49□□□□□ -1.53
TRIM55-203ENST00000350034 ATP5G3P48201 142 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 RND2P52198 227 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 PLP1P60201 277 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 SELENOTP62341 195 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 SSX2Q16385 188 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 KLK9Q2XQG4 91 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 RNF212Q495C1 297 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 RUSC1-AS1Q66K80 236 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 CTRB2Q6GPI1 263 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 ZNF562Q6V9R5 426 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 PQLC2Q6ZP29 291 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 OR4F5Q8NH21 305 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 NANPQ8TBE9 248 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 TMEM37Q8WXS4 190 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 FAM168AQ92567 244 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 HIST1H2BAQ96A08 127 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 C11orf52Q96A22 123 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 ACY3Q96HD9 319 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 FAM167A-AS1Q96KT0 104 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 OR4F4Q96R69 305 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 PIMREGQ9BSJ6 248 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 SLC25A33Q9BSK2 321 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 PARLQ9H300 379 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 LPAR2Q9HBW0 351 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 TMEM242Q9NWH2 141 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 TECRQ9NZ01 308 aaKnown RBP5.49□□□□□ -1.53
TRIM55-203ENST00000350034 NAT8Q9UHE5 227 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 KLK9Q9UKQ9 250 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 CELSR2Q9HCU4 2923 aa5.49□□□□□ -1.53
TRIM55-203ENST00000350034 SPTBN1Q01082 2364 aaKnown RBP5.49□□□□□ -1.53
TRIM55-203ENST00000350034 NPIPB5A8MRT5 1133 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 K7EIM0 57 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 NPFFO15130 113 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 MT-CO2P00403 227 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 MT-ND4LP03901 98 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 CRYBA1P05813 215 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 C8orf88P0DMB2 117 aa5.48□□□□□ -1.53
TRIM55-203ENST00000350034 ATF4P18848 351 aaPredicted RBP5.48□□□□□ -1.53
TRIM55-203ENST00000350034 CD24P25063 80 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms