RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 NKX2-8O15522 239 aa15.25■□□□□ 0.03
SCARF1-202ENST00000348987 SLC35E4Q6ICL7 350 aa15.25■□□□□ 0.03
SCARF1-202ENST00000348987 DCTN5Q9BTE1 182 aa15.25■□□□□ 0.03
SCARF1-202ENST00000348987 SLC25A10Q9UBX3 287 aaPredicted RBP15.25■□□□□ 0.03
SCARF1-202ENST00000348987 CEP250Q9BV73 2442 aa15.25■□□□□ 0.03
SCARF1-202ENST00000348987 IGHV3-13P01766 116 aa15.25■□□□□ 0.03
SCARF1-202ENST00000348987 IGHV3-7P01780 117 aa15.25■□□□□ 0.03
SCARF1-202ENST00000348987 FAM120AOSQ5T036 256 aa15.25■□□□□ 0.03
SCARF1-202ENST00000348987 C12orf54Q6X4T0 127 aa15.25■□□□□ 0.03
SCARF1-202ENST00000348987 FER1L6-AS2Q96M78 137 aa15.25■□□□□ 0.03
SCARF1-202ENST00000348987 TRIB1Q96RU8 372 aa15.25■□□□□ 0.03
SCARF1-202ENST00000348987 SELENOKQ9Y6D0 94 aa15.25■□□□□ 0.03
SCARF1-202ENST00000348987 A0A087X0K7 114 aa15.24■□□□□ 0.03
SCARF1-202ENST00000348987 SPAARA0A1B0GVQ0 90 aa15.24■□□□□ 0.03
SCARF1-202ENST00000348987 GPR12P47775 334 aa15.24■□□□□ 0.03
SCARF1-202ENST00000348987 FAM71F2Q6NXP2 309 aa15.24■□□□□ 0.03
SCARF1-202ENST00000348987 MCRIP2Q9BUT9 160 aaKnown RBP15.24■□□□□ 0.03
SCARF1-202ENST00000348987 SMIM12Q96EX1 92 aa15.24■□□□□ 0.03
SCARF1-202ENST00000348987 COMMD5Q9GZQ3 224 aa15.24■□□□□ 0.03
SCARF1-202ENST00000348987 ICE1Q9Y2F5 2266 aa15.23■□□□□ 0.03
SCARF1-202ENST00000348987 IQCF6A8MYZ5 107 aa15.23■□□□□ 0.03
SCARF1-202ENST00000348987 SYS1-DBNDD2H3BUS1 97 aa15.23■□□□□ 0.03
SCARF1-202ENST00000348987 CD24P25063 80 aa15.23■□□□□ 0.03
SCARF1-202ENST00000348987 MRPL49Q13405 166 aaKnown RBP15.23■□□□□ 0.03
SCARF1-202ENST00000348987 RASL11AQ6T310 242 aa15.23■□□□□ 0.03
SCARF1-202ENST00000348987 MOB3BQ86TA1 216 aa15.23■□□□□ 0.03
SCARF1-202ENST00000348987 CNEP1R1Q8N9A8 125 aa15.23■□□□□ 0.03
SCARF1-202ENST00000348987 SNRNP40Q96DI7 357 aaKnown RBP15.23■□□□□ 0.03
SCARF1-202ENST00000348987 TMEM140Q9NV12 185 aa15.23■□□□□ 0.03
SCARF1-202ENST00000348987 CORTO00230 105 aa15.23■□□□□ 0.03
SCARF1-202ENST00000348987 CRXO43186 299 aaPredicted RBP15.23■□□□□ 0.03
SCARF1-202ENST00000348987 ERVK-16P61578 105 aa15.23■□□□□ 0.03
SCARF1-202ENST00000348987 GABRA6Q16445 453 aa15.23■□□□□ 0.03
SCARF1-202ENST00000348987 AKAP13Q12802 2813 aa15.22■□□□□ 0.03
SCARF1-202ENST00000348987 RPL39P5Q59GN2 51 aa15.22■□□□□ 0.03
SCARF1-202ENST00000348987 TRAT1Q6PIZ9 186 aa15.22■□□□□ 0.03
SCARF1-202ENST00000348987 DEFB124Q8NES8 71 aa15.22■□□□□ 0.03
SCARF1-202ENST00000348987 FAM90A9PA6NNJ1 464 aa15.22■□□□□ 0.03
SCARF1-202ENST00000348987 CD5LO43866 347 aa15.22■□□□□ 0.03
SCARF1-202ENST00000348987 CCL11P51671 97 aa15.22■□□□□ 0.03
SCARF1-202ENST00000348987 FOXA3P55318 350 aaPredicted RBP15.22■□□□□ 0.03
SCARF1-202ENST00000348987 MBD6Q96DN6 1003 aa15.22■□□□□ 0.03
SCARF1-202ENST00000348987 PTPRBP23467 1997 aa15.22■□□□□ 0.03
SCARF1-202ENST00000348987 HIGD1CA8MV81 97 aa15.21■□□□□ 0.03
SCARF1-202ENST00000348987 WT1P19544 449 aaPredicted RBP15.21■□□□□ 0.03
SCARF1-202ENST00000348987 FABP6P51161 128 aa15.21■□□□□ 0.03
SCARF1-202ENST00000348987 VWA1Q6PCB0 445 aa15.21■□□□□ 0.03
SCARF1-202ENST00000348987 OR2V2Q96R30 315 aa15.21■□□□□ 0.03
SCARF1-202ENST00000348987 DUSP13Q9UII6 198 aa15.21■□□□□ 0.03
SCARF1-202ENST00000348987 CHTOPQ9Y3Y2 248 aaKnown RBP15.21■□□□□ 0.03
SCARF1-202ENST00000348987 VWC2LB2RUY7 222 aa15.21■□□□□ 0.03
SCARF1-202ENST00000348987 MYOD1P15172 320 aa15.21■□□□□ 0.03
SCARF1-202ENST00000348987 WFDC8Q8IUA0 241 aa15.21■□□□□ 0.03
SCARF1-202ENST00000348987 HINT2Q9BX68 163 aa15.21■□□□□ 0.03
SCARF1-202ENST00000348987 SCRT2Q9NQ03 307 aa15.21■□□□□ 0.03
SCARF1-202ENST00000348987 ATMQ13315 3056 aa15.21■□□□□ 0.02
SCARF1-202ENST00000348987 IGHV1-24A0A0C4DH33 117 aa15.2■□□□□ 0.02
SCARF1-202ENST00000348987 H0Y8G0 127 aa15.2■□□□□ 0.02
SCARF1-202ENST00000348987 OR2J3O76001 311 aa15.2■□□□□ 0.02
SCARF1-202ENST00000348987 INTS1Q8N201 2190 aaKnown RBP15.2■□□□□ 0.02
SCARF1-202ENST00000348987 IGKV1OR2-108A0A075B7D4 117 aa15.2■□□□□ 0.02
SCARF1-202ENST00000348987 HSBP1L1C9JCN9 74 aa15.2■□□□□ 0.02
SCARF1-202ENST00000348987 J3QR06 171 aa15.2■□□□□ 0.02
SCARF1-202ENST00000348987 LEPROTL1O95214 131 aa15.2■□□□□ 0.02
SCARF1-202ENST00000348987 IGLC1P0CG04 106 aa15.2■□□□□ 0.02
SCARF1-202ENST00000348987 FOXE3Q13461 319 aa15.2■□□□□ 0.02
SCARF1-202ENST00000348987 WDR82Q6UXN9 313 aa15.2■□□□□ 0.02
SCARF1-202ENST00000348987 PEF1Q9UBV8 284 aaKnown RBP15.2■□□□□ 0.02
SCARF1-202ENST00000348987 DMXL2Q8TDJ6 3036 aa15.19■□□□□ 0.02
SCARF1-202ENST00000348987 GRAMD2BQ96HH9 432 aa15.19■□□□□ 0.02
SCARF1-202ENST00000348987 HEATR1Q9H583 2144 aaKnown RBP15.19■□□□□ 0.02
SCARF1-202ENST00000348987 TRGV8A0A0C4DH27 118 aa15.19■□□□□ 0.02
SCARF1-202ENST00000348987 A0A1W2PRE2 83 aa15.19■□□□□ 0.02
SCARF1-202ENST00000348987 J3QW42 95 aa15.19■□□□□ 0.02
SCARF1-202ENST00000348987 CIDEAO60543 219 aa15.19■□□□□ 0.02
SCARF1-202ENST00000348987 ACP7Q6ZNF0 438 aa15.19■□□□□ 0.02
SCARF1-202ENST00000348987 Q6ZT83 130 aa15.19■□□□□ 0.02
SCARF1-202ENST00000348987 ZNF835Q9Y2P0 537 aa15.19■□□□□ 0.02
SCARF1-202ENST00000348987 EDDM3AQ14507 147 aa15.18■□□□□ 0.02
SCARF1-202ENST00000348987 GNG12Q9UBI6 72 aa15.18■□□□□ 0.02
SCARF1-202ENST00000348987 ZNF292O60281 2723 aa15.18■□□□□ 0.02
SCARF1-202ENST00000348987 TRAV5A0A0B4J249 113 aa15.18■□□□□ 0.02
SCARF1-202ENST00000348987 C7orf71A4D174 169 aa15.18■□□□□ 0.02
SCARF1-202ENST00000348987 GAGE10A6NGK3 116 aa15.18■□□□□ 0.02
SCARF1-202ENST00000348987 SPINT2O43291 252 aa15.18■□□□□ 0.02
SCARF1-202ENST00000348987 SNAI2O43623 268 aa15.18■□□□□ 0.02
SCARF1-202ENST00000348987 TMEM178AQ8NBL3 297 aa15.18■□□□□ 0.02
SCARF1-202ENST00000348987 S1PR3Q99500 378 aa15.18■□□□□ 0.02
SCARF1-202ENST00000348987 PMCHL2Q9BQD1 86 aa15.18■□□□□ 0.02
SCARF1-202ENST00000348987 TMEM191AQ9H0A3 160 aa15.18■□□□□ 0.02
SCARF1-202ENST00000348987 KIR2DL2P43627 348 aaPredicted RBP15.17■□□□□ 0.02
SCARF1-202ENST00000348987 MORN5Q5VZ52 161 aa15.17■□□□□ 0.02
SCARF1-202ENST00000348987 SSX8Q7RTT4 187 aa15.17■□□□□ 0.02
SCARF1-202ENST00000348987 FDCSPQ8NFU4 85 aa15.17■□□□□ 0.02
SCARF1-202ENST00000348987 C1RLQ9NZP8 487 aa15.17■□□□□ 0.02
SCARF1-202ENST00000348987 C15orf61A6NNL5 157 aa15.17■□□□□ 0.02
SCARF1-202ENST00000348987 IGKV3-15P01624 115 aa15.17■□□□□ 0.02
SCARF1-202ENST00000348987 HIST1H1AQ02539 215 aaPredicted RBP15.17■□□□□ 0.02
SCARF1-202ENST00000348987 FER1L6-AS1Q8NA97 138 aa15.17■□□□□ 0.02
SCARF1-202ENST00000348987 FNDC4Q9H6D8 234 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms