RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 SMDT1Q9H4I9 107 aa13.75□□□□□ -0.21
SMARCC2-202ENST00000347471 CXorf1O96002 111 aa13.75□□□□□ -0.21
SMARCC2-202ENST00000347471 GCHFRP30047 84 aa13.75□□□□□ -0.21
SMARCC2-202ENST00000347471 MANBALQ9NQG1 85 aa13.75□□□□□ -0.21
SMARCC2-202ENST00000347471 TNFRSF19Q9NS68 423 aa13.75□□□□□ -0.21
SMARCC2-202ENST00000347471 TGIF2-C20orf24A0A0A6YYL0 155 aa13.74□□□□□ -0.21
SMARCC2-202ENST00000347471 C9orf152Q5JTZ5 239 aa13.74□□□□□ -0.21
SMARCC2-202ENST00000347471 IGHV3OR16-8A0A075B7F1 116 aa13.74□□□□□ -0.21
SMARCC2-202ENST00000347471 FAM168AQ92567 244 aa13.74□□□□□ -0.21
SMARCC2-202ENST00000347471 SGK494Q96LW2 274 aa13.74□□□□□ -0.21
SMARCC2-202ENST00000347471 TMEM8BA6NDV4 472 aa13.74□□□□□ -0.21
SMARCC2-202ENST00000347471 PYYP10082 97 aa13.74□□□□□ -0.21
SMARCC2-202ENST00000347471 LYZP61626 148 aa13.74□□□□□ -0.21
SMARCC2-202ENST00000347471 MORN5Q5VZ52 161 aa13.74□□□□□ -0.21
SMARCC2-202ENST00000347471 TEX45Q8NA69 505 aa13.74□□□□□ -0.21
SMARCC2-202ENST00000347471 NANPQ8TBE9 248 aa13.74□□□□□ -0.21
SMARCC2-202ENST00000347471 WNT10AQ9GZT5 417 aa13.74□□□□□ -0.21
SMARCC2-202ENST00000347471 IGHV2-5P01817 119 aa13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 SUMO1P63165 101 aaKnown RBP13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 BSXQ3C1V8 233 aa13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 CYP2G1PQ6ZSU1 146 aa13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 MRPL41Q8IXM3 137 aaKnown RBP13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 SLC45A2Q9UMX9 530 aa13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 CELSR1Q9NYQ6 3014 aa13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 IGLC7A0M8Q6 106 aa13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 NBR2O15453 112 aa13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 TSPAN9O75954 239 aa13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 TMEM11P17152 192 aa13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 RPL29P47914 159 aaKnown RBP13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 ZNF137PP52743 207 aa13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 RAB5BP61020 215 aa13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 UBE2L3P68036 154 aaKnown RBP13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 FAM71F2Q6NXP2 309 aa13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 OR5AU1Q8NGC0 362 aa13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 YTHDF2Q9Y5A9 579 aaKnown RBP13.73□□□□□ -0.21
SMARCC2-202ENST00000347471 STAG3L2P0CL84 134 aa13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 STAG3L3P0CL85 134 aa13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 COMPP49747 757 aaPredicted RBP13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 RAB5AP20339 215 aa13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 ECSCRQ19T08 205 aa13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 C8orf31Q8N9H6 132 aa13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 LY6G5BQ8NDX9 201 aa13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 A0A1W2PPQ1 181 aa13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 H7BYZ3 331 aa13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 PDLIM4P50479 330 aa13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 MFAP2P55001 183 aa13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 CLEC2AQ6UVW9 174 aa13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 TMEM219Q86XT9 240 aa13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 OR4A5Q8NH83 315 aa13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 TMEM37Q8WXS4 190 aa13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 NAT8Q9UHE5 227 aa13.72□□□□□ -0.21
SMARCC2-202ENST00000347471 SMUG1Q53HV7 270 aa13.71□□□□□ -0.21
SMARCC2-202ENST00000347471 FAM120AOSQ5T036 256 aa13.71□□□□□ -0.21
SMARCC2-202ENST00000347471 C10orf113Q5VZT2 155 aa13.71□□□□□ -0.21
SMARCC2-202ENST00000347471 C15orf54Q8N8G6 183 aa13.71□□□□□ -0.21
SMARCC2-202ENST00000347471 TMUB1Q9BVT8 246 aa13.71□□□□□ -0.21
SMARCC2-202ENST00000347471 SDF2L1Q9HCN8 221 aa13.71□□□□□ -0.21
SMARCC2-202ENST00000347471 IGHV4-61A0A0C4DH41 118 aa13.71□□□□□ -0.21
SMARCC2-202ENST00000347471 MT-ND4LP03901 98 aa13.71□□□□□ -0.21
SMARCC2-202ENST00000347471 SAA4P35542 130 aa13.71□□□□□ -0.21
SMARCC2-202ENST00000347471 LINC00527Q9UJ94 153 aa13.71□□□□□ -0.21
SMARCC2-202ENST00000347471 FUT9Q9Y231 359 aa13.71□□□□□ -0.21
SMARCC2-202ENST00000347471 ASPHD1Q5U4P2 390 aa13.71□□□□□ -0.22
SMARCC2-202ENST00000347471 C16orf82Q7Z2V1 217 aa13.71□□□□□ -0.22
SMARCC2-202ENST00000347471 TECRQ9NZ01 308 aaKnown RBP13.71□□□□□ -0.22
SMARCC2-202ENST00000347471 ANKRD17O75179 2603 aaKnown RBP13.7□□□□□ -0.22
SMARCC2-202ENST00000347471 M0R1W7 72 aa13.7□□□□□ -0.22
SMARCC2-202ENST00000347471 NPPCP23582 126 aa13.7□□□□□ -0.22
SMARCC2-202ENST00000347471 CRYBB3P26998 211 aa13.7□□□□□ -0.22
SMARCC2-202ENST00000347471 SNRPEP62304 92 aaKnown RBP13.7□□□□□ -0.22
SMARCC2-202ENST00000347471 Q8WTZ3 238 aa13.7□□□□□ -0.22
SMARCC2-202ENST00000347471 DNAJC4Q9NNZ3 241 aa13.7□□□□□ -0.22
SMARCC2-202ENST00000347471 PCP4L1A6NKN8 68 aa13.7□□□□□ -0.22
SMARCC2-202ENST00000347471 HOXB4P17483 251 aaPredicted RBP13.7□□□□□ -0.22
SMARCC2-202ENST00000347471 NHLRC2Q8NBF2 726 aa13.7□□□□□ -0.22
SMARCC2-202ENST00000347471 C8orf46Q8TAG6 207 aa13.7□□□□□ -0.22
SMARCC2-202ENST00000347471 CXCL1P09341 107 aa13.7□□□□□ -0.22
SMARCC2-202ENST00000347471 RANP62826 216 aaKnown RBP13.7□□□□□ -0.22
SMARCC2-202ENST00000347471 OR5B12Q96R08 314 aa13.7□□□□□ -0.22
SMARCC2-202ENST00000347471 ELOVL1Q9BW60 279 aa13.7□□□□□ -0.22
SMARCC2-202ENST00000347471 TRAV40A0A0B4J280 105 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 TAS2R45P59539 299 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 RPL23P62829 140 aaKnown RBP13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 PRR20EP86478 221 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 PRR20CP86479 221 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 PRR20DP86480 221 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 PRR20BP86481 221 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 PRR20AP86496 221 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 OR2T10Q8NGZ9 312 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 SEC14L6B5MCN3 397 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 MGST1P10620 155 aaKnown RBP13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 CX3CL1P78423 397 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 LY6EQ16553 131 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 LINC00305Q7Z4B0 112 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 CSMD2Q7Z408 3487 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 CLDN34H7C241 214 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 CACNG8Q8WXS5 425 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 RBM14Q96PK6 669 aaKnown RBP13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 PIMREGQ9BSJ6 248 aa13.69□□□□□ -0.22
SMARCC2-202ENST00000347471 PDZD11Q5EBL8 140 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 184.7 ms