RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 OR11H12B2RN74 326 aa12.96□□□□□ -0.34
SRPK1-201ENST00000346162 OR11H1Q8NG94 326 aa12.96□□□□□ -0.34
SRPK1-201ENST00000346162 OR11H2Q8NH07 326 aa12.96□□□□□ -0.34
SRPK1-201ENST00000346162 TCF19Q9Y242 345 aa12.96□□□□□ -0.34
SRPK1-201ENST00000346162 HEATR5AQ86XA9 2040 aa12.96□□□□□ -0.34
SRPK1-201ENST00000346162 IGHV3-21A0A0B4J1V1 117 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 A0A1W2PRE2 83 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 CRYGSP22914 178 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 GLRXP35754 106 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 TEX43Q6ZNM6 134 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 C10orf126Q8N4M7 172 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 FGFBP3Q8TAT2 258 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 MRPL32Q9BYC8 188 aaKnown RBP12.95□□□□□ -0.34
SRPK1-201ENST00000346162 SEPSECSQ9HD40 501 aaKnown RBP12.95□□□□□ -0.34
SRPK1-201ENST00000346162 IDI2-AS1Q9NZ38 188 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 C1RLQ9NZP8 487 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 PINLYPA6NC86 204 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 IFNL4K9M1U5 179 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 RPL27AP46776 148 aaKnown RBP12.95□□□□□ -0.34
SRPK1-201ENST00000346162 TWIST1Q15672 202 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 TMEM249Q2WGJ8 235 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 TSSC4Q9Y5U2 329 aaPredicted RBP12.95□□□□□ -0.34
SRPK1-201ENST00000346162 COX6CP09669 75 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 AZU1P20160 251 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 MC5RP33032 325 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 KIR3DS1Q14943 382 aa12.95□□□□□ -0.34
SRPK1-201ENST00000346162 ACP7Q6ZNF0 438 aa12.94□□□□□ -0.34
SRPK1-201ENST00000346162 VKORC1L1Q8N0U8 176 aa12.94□□□□□ -0.34
SRPK1-201ENST00000346162 PRR7Q8TB68 274 aa12.94□□□□□ -0.34
SRPK1-201ENST00000346162 CEACAM18A8MTB9 384 aa12.94□□□□□ -0.34
SRPK1-201ENST00000346162 IGHV1-2P23083 117 aa12.94□□□□□ -0.34
SRPK1-201ENST00000346162 NABP1Q96AH0 204 aa12.94□□□□□ -0.34
SRPK1-201ENST00000346162 TMEM262E9PQX1 116 aa12.94□□□□□ -0.34
SRPK1-201ENST00000346162 TSPAN13O95857 204 aa12.94□□□□□ -0.34
SRPK1-201ENST00000346162 CELA3BP08861 270 aa12.94□□□□□ -0.34
SRPK1-201ENST00000346162 RPL30P62888 115 aaKnown RBP12.94□□□□□ -0.34
SRPK1-201ENST00000346162 ANKRD39Q53RE8 183 aa12.94□□□□□ -0.34
SRPK1-201ENST00000346162 A0A1B0GW15 77 aa12.94□□□□□ -0.34
SRPK1-201ENST00000346162 TGFAP01135 160 aa12.94□□□□□ -0.34
SRPK1-201ENST00000346162 ADAMTSL5Q6ZMM2 481 aa12.94□□□□□ -0.34
SRPK1-201ENST00000346162 TMUB1Q9BVT8 246 aa12.94□□□□□ -0.34
SRPK1-201ENST00000346162 IGHV2-70DA0A0C4DH43 119 aa12.93□□□□□ -0.34
SRPK1-201ENST00000346162 TMEM189A5PLL7 270 aa12.93□□□□□ -0.34
SRPK1-201ENST00000346162 MAP1LC3AQ9H492 121 aa12.93□□□□□ -0.34
SRPK1-201ENST00000346162 PSG3Q16557 428 aa12.93□□□□□ -0.34
SRPK1-201ENST00000346162 WFDC3Q8IUB2 231 aa12.93□□□□□ -0.34
SRPK1-201ENST00000346162 COL6A6A6NMZ7 2263 aa12.93□□□□□ -0.34
SRPK1-201ENST00000346162 FAM71F2Q6NXP2 309 aa12.93□□□□□ -0.34
SRPK1-201ENST00000346162 RTN4RL2Q86UN3 420 aa12.93□□□□□ -0.34
SRPK1-201ENST00000346162 IGKV1D-13A0A0B4J2D9 117 aa12.93□□□□□ -0.34
SRPK1-201ENST00000346162 GOSR1O95249 250 aa12.93□□□□□ -0.34
SRPK1-201ENST00000346162 IGKV1-13P0DP09 117 aa12.93□□□□□ -0.34
SRPK1-201ENST00000346162 LGALS7P47929 136 aa12.93□□□□□ -0.34
SRPK1-201ENST00000346162 UCNP55089 124 aa12.93□□□□□ -0.34
SRPK1-201ENST00000346162 GGNQ86UU5 652 aa12.93□□□□□ -0.34
SRPK1-201ENST00000346162 C1orf162Q8NEQ5 155 aaPredicted RBP12.93□□□□□ -0.34
SRPK1-201ENST00000346162 ZNF407Q9C0G0 2248 aa12.93□□□□□ -0.34
SRPK1-201ENST00000346162 IGKV1-12A0A0C4DH73 117 aa12.92□□□□□ -0.34
SRPK1-201ENST00000346162 A0A1W2PS18 150 aa12.92□□□□□ -0.34
SRPK1-201ENST00000346162 IGKV1D-12P01611 117 aa12.92□□□□□ -0.34
SRPK1-201ENST00000346162 HOXA4Q00056 320 aaPredicted RBP12.92□□□□□ -0.34
SRPK1-201ENST00000346162 Q0VG73 95 aa12.92□□□□□ -0.34
SRPK1-201ENST00000346162 GCSAMLQ5JQS6 135 aa12.92□□□□□ -0.34
SRPK1-201ENST00000346162 HIGD1AQ9Y241 93 aa12.92□□□□□ -0.34
SRPK1-201ENST00000346162 ATP5IP56385 69 aaPredicted RBP12.92□□□□□ -0.34
SRPK1-201ENST00000346162 OR9G4Q8NGQ1 327 aa12.92□□□□□ -0.34
SRPK1-201ENST00000346162 WNK2Q9Y3S1 2297 aa12.92□□□□□ -0.34
SRPK1-201ENST00000346162 FOXG1P55316 489 aaPredicted RBP12.92□□□□□ -0.34
SRPK1-201ENST00000346162 COA6Q5JTJ3 125 aaKnown RBP12.92□□□□□ -0.34
SRPK1-201ENST00000346162 TCF24Q7RTU0 167 aa12.92□□□□□ -0.34
SRPK1-201ENST00000346162 FAM222BQ8WU58 562 aa12.92□□□□□ -0.34
SRPK1-201ENST00000346162 GUSBP1Q15486 140 aa12.92□□□□□ -0.34
SRPK1-201ENST00000346162 HCP5Q6MZN7 132 aa12.92□□□□□ -0.34
SRPK1-201ENST00000346162 TSKUQ8WUA8 353 aa12.92□□□□□ -0.34
SRPK1-201ENST00000346162 C2orf83Q53S99 150 aa12.91□□□□□ -0.34
SRPK1-201ENST00000346162 BEX4Q9NWD9 120 aaPredicted RBP12.91□□□□□ -0.34
SRPK1-201ENST00000346162 FAM27E3Q08E93 113 aa12.91□□□□□ -0.34
SRPK1-201ENST00000346162 OR13A1Q8NGR1 328 aa12.91□□□□□ -0.34
SRPK1-201ENST00000346162 MRAP2Q96G30 205 aa12.91□□□□□ -0.34
SRPK1-201ENST00000346162 RPL39P5Q59GN2 51 aa12.91□□□□□ -0.34
SRPK1-201ENST00000346162 CHTOPQ9Y3Y2 248 aaKnown RBP12.91□□□□□ -0.34
SRPK1-201ENST00000346162 KIAA2026Q5HYC2 2103 aa12.91□□□□□ -0.34
SRPK1-201ENST00000346162 IGKV3D-15A0A087WSY6 115 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 C5orf63A6NC05 138 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 TMEM50AO95807 157 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 CACNG7P62955 275 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 BCL6BQ8N143 479 aaPredicted RBP12.9□□□□□ -0.34
SRPK1-201ENST00000346162 C9orf106Q8NAJ2 232 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 MYO7BQ6PIF6 2116 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 C17orf98A8MV24 154 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 IQCF6A8MYZ5 107 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 F5H697 171 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 SYS1-DBNDD2H3BUS1 97 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 F2RL2O00254 374 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 DLL1O00548 723 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 SCGB1A1P11684 91 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 DCTN5Q9BTE1 182 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 Q8NFD4 153 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 SCNM1Q9BWG6 230 aa12.9□□□□□ -0.34
SRPK1-201ENST00000346162 PNRC2Q9NPJ4 139 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms