RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CD5P06127 495 aa16.39■□□□□ 0.21
HDAC4-201ENST00000345617 VKORC1Q9BQB6 163 aa16.39■□□□□ 0.21
HDAC4-201ENST00000345617 REG1AP05451 166 aa16.39■□□□□ 0.21
HDAC4-201ENST00000345617 FAM166AQ6J272 317 aa16.39■□□□□ 0.21
HDAC4-201ENST00000345617 TSKUQ8WUA8 353 aa16.39■□□□□ 0.21
HDAC4-201ENST00000345617 ST6GALNAC6Q969X2 333 aa16.38■□□□□ 0.21
HDAC4-201ENST00000345617 HIST3H2BBQ8N257 126 aa16.38■□□□□ 0.21
HDAC4-201ENST00000345617 TRBV20-1A0A075B6N2 111 aa16.38■□□□□ 0.21
HDAC4-201ENST00000345617 Q6ZS52 159 aa16.38■□□□□ 0.21
HDAC4-201ENST00000345617 DEFB123Q8N688 67 aa16.38■□□□□ 0.21
HDAC4-201ENST00000345617 ST6GALNAC3Q8NDV1 305 aa16.38■□□□□ 0.21
HDAC4-201ENST00000345617 FOXD3Q9UJU5 478 aaPredicted RBP16.38■□□□□ 0.21
HDAC4-201ENST00000345617 CHTOPQ9Y3Y2 248 aaKnown RBP16.38■□□□□ 0.21
HDAC4-201ENST00000345617 Q5BKY6 102 aa16.38■□□□□ 0.21
HDAC4-201ENST00000345617 DTX4Q9Y2E6 619 aa16.38■□□□□ 0.21
HDAC4-201ENST00000345617 UBE2V1Q13404 147 aa16.38■□□□□ 0.21
HDAC4-201ENST00000345617 CHAC1Q9BUX1 264 aa16.38■□□□□ 0.21
HDAC4-201ENST00000345617 PVRIGQ6DKI7 326 aa16.37■□□□□ 0.21
HDAC4-201ENST00000345617 WBP1LQ9NX94 342 aa16.37■□□□□ 0.21
HDAC4-201ENST00000345617 FABP5P3A8MUU1 101 aa16.37■□□□□ 0.21
HDAC4-201ENST00000345617 CD69Q07108 199 aa16.37■□□□□ 0.21
HDAC4-201ENST00000345617 B9A039 149 aa16.37■□□□□ 0.21
HDAC4-201ENST00000345617 FOXS1O43638 330 aa16.37■□□□□ 0.21
HDAC4-201ENST00000345617 UMODP07911 640 aa16.37■□□□□ 0.21
HDAC4-201ENST00000345617 PEBP1P30086 187 aaKnown RBP16.37■□□□□ 0.21
HDAC4-201ENST00000345617 KIF26AQ9ULI4 1882 aaPredicted RBP16.36■□□□□ 0.21
HDAC4-201ENST00000345617 SPINT1O43278 529 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 ACTL10Q5JWF8 245 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 ACP7Q6ZNF0 438 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 OR9G9P0C7N8 305 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 LOC105371242A0A075B767 164 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 TRAV12-3A0A0B4J271 114 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 TFPI2P48307 235 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 TMEM144Q7Z5S9 345 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 TMEM54Q969K7 222 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 C18orf12Q96KH6 178 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 RTBDNQ9BSG5 229 aaPredicted RBP16.36■□□□□ 0.21
HDAC4-201ENST00000345617 FOXH1O75593 365 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 ITLN1Q8WWA0 313 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 A0A0J9YW62 118 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 SNAI2O43623 268 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 CELA2BP08218 269 aaPredicted RBP16.36■□□□□ 0.21
HDAC4-201ENST00000345617 TIMP3P35625 211 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 MYF5P13349 255 aa16.36■□□□□ 0.21
HDAC4-201ENST00000345617 C9JCJ5 164 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 CDK2AP2O75956 126 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 CD160O95971 181 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 DUX3Q96PT4 197 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 RNF115Q9Y4L5 304 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 TRAV5A0A0B4J249 113 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 IGKV1-8A0A0C4DH67 115 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 GAGE12BA1L429 117 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 SRSF7Q16629 238 aaKnown RBP eCLIP16.35■□□□□ 0.213e-10■■■■■ 33.8
HDAC4-201ENST00000345617 PILRBQ9UKJ0 227 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 DLEU1O43261 78 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 TFF3Q07654 80 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 TMEM92Q6UXU6 159 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 NLRC5Q86WI3 1866 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 IGHV3OR16-12A0A075B7B8 117 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 SP9P0CG40 484 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 ABHD17AQ96GS6 310 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 A0A0G2JMM0 328 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 A0A1W2PPB8 328 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 TMEM8BA6NDV4 472 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 KIR3DP1A8MWS1 328 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 TPRX1Q8N7U7 411 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 PLEKHB2Q96CS7 222 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 C21orf62Q9NYP8 219 aa16.35■□□□□ 0.21
HDAC4-201ENST00000345617 C15orf61A6NNL5 157 aa16.34■□□□□ 0.21
HDAC4-201ENST00000345617 BOD1L2Q8IYS8 172 aa16.34■□□□□ 0.21
HDAC4-201ENST00000345617 C1orf162Q8NEQ5 155 aaPredicted RBP16.34■□□□□ 0.21
HDAC4-201ENST00000345617 FBLN5Q9UBX5 448 aa16.34■□□□□ 0.21
HDAC4-201ENST00000345617 AGMATQ9BSE5 352 aa16.34■□□□□ 0.21
HDAC4-201ENST00000345617 PIN1P1O15428 100 aa16.34■□□□□ 0.21
HDAC4-201ENST00000345617 RNF222A6NCQ9 220 aa16.34■□□□□ 0.21
HDAC4-201ENST00000345617 FGF16O43320 207 aa16.34■□□□□ 0.21
HDAC4-201ENST00000345617 SNRPCP09234 159 aaKnown RBP16.34■□□□□ 0.21
HDAC4-201ENST00000345617 C1orf53Q5VUE5 145 aa16.34■□□□□ 0.21
HDAC4-201ENST00000345617 FAM219BQ5XKK7 198 aa16.34■□□□□ 0.21
HDAC4-201ENST00000345617 COL9A1P20849 921 aa16.34■□□□□ 0.21
HDAC4-201ENST00000345617 ASCL4Q6XD76 172 aa16.34■□□□□ 0.21
HDAC4-201ENST00000345617 CCL21O00585 134 aa16.33■□□□□ 0.21
HDAC4-201ENST00000345617 IGFBP6P24592 240 aaPredicted RBP16.33■□□□□ 0.21
HDAC4-201ENST00000345617 IFI27L1Q96BM0 104 aa16.33■□□□□ 0.21
HDAC4-201ENST00000345617 MRPL27Q9P0M9 148 aaKnown RBP16.33■□□□□ 0.21
HDAC4-201ENST00000345617 ZNF362Q5T0B9 420 aaPredicted RBP16.33■□□□□ 0.2
HDAC4-201ENST00000345617 Q6ZT83 130 aa16.33■□□□□ 0.2
HDAC4-201ENST00000345617 RNASE7Q9H1E1 156 aaKnown RBP16.33■□□□□ 0.2
HDAC4-201ENST00000345617 KLF12Q9Y4X4 402 aa16.33■□□□□ 0.2
HDAC4-201ENST00000345617 LINC01590Q5TEZ4 76 aa16.33■□□□□ 0.2
HDAC4-201ENST00000345617 CFHR5Q9BXR6 569 aa16.33■□□□□ 0.2
HDAC4-201ENST00000345617 LY96Q9Y6Y9 160 aa16.33■□□□□ 0.2
HDAC4-201ENST00000345617 MESP2Q0VG99 397 aa16.33■□□□□ 0.2
HDAC4-201ENST00000345617 DPH3Q96FX2 82 aa16.33■□□□□ 0.2
HDAC4-201ENST00000345617 TDGF1P13385 188 aa16.33■□□□□ 0.2
HDAC4-201ENST00000345617 IGFBP2P18065 325 aa16.33■□□□□ 0.2
HDAC4-201ENST00000345617 FOXC1Q12948 553 aa16.33■□□□□ 0.2
HDAC4-201ENST00000345617 DCTN5Q9BTE1 182 aa16.33■□□□□ 0.2
HDAC4-201ENST00000345617 IGKV3OR2-268A0A0C4DH90 116 aa16.32■□□□□ 0.2
HDAC4-201ENST00000345617 UPK2O00526 184 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms